Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 179 |
| Acc36I | ACCTGC | 1 cut(s) | 179 |
| AccBSI | CCGCTC | 1 cut(s) | 924 |
| AciI | CCGC | 3 cut(s) | 404, 924, 1063 |
| AclWI | GGATC | 4 cut(s) | 101, 257, 538, 674 |
| AcsI | RAATTY | 2 cut(s) | 474, 961 |
| AcuI | CTGAAG | 1 cut(s) | 354 |
| AfaI | GTAC | 2 cut(s) | 420, 621 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 403, 1059 |
| AflIII | ACRYGT | 1 cut(s) | 486 |
| AgsI | TTSAA | 5 cut(s) | 31, 343, 473, 644, 709 |
| AjnI | CCWGG | 1 cut(s) | 265 |
| AluBI | AGCT | 7 cut(s) | 34, 233, 321, 338, 465, 507, 998 |
| AluI | AGCT | 7 cut(s) | 34, 233, 321, 338, 465, 507, 998 |
| Alw26I | GTCTC | 1 cut(s) | 236 |
| AlwI | GGATC | 4 cut(s) | 101, 257, 538, 674 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 90 |
| Ama87I | CYCGRG | 1 cut(s) | 1089 |
| AoxI | GGCC | 5 cut(s) | 301, 584, 631, 732, 966 |
| ApeKI | GCWGC | 4 cut(s) | 167, 465, 995, 1094 |
| ApoI | RAATTY | 2 cut(s) | 474, 961 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 594, 626 |
| AseI | ATTAAT | 1 cut(s) | 797 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 64 |
| AspLEI | GCGC | 1 cut(s) | 564 |
| AspS9I | GGNCC | 2 cut(s) | 631, 757 |
| AsuC2I | CCSGG | 2 cut(s) | 1090, 1091 |
| AsuII | TTCGAA | 1 cut(s) | 659 |
| AvaI | CYCGRG | 1 cut(s) | 1089 |
| AvaII | GGWCC | 1 cut(s) | 757 |
| BanII | GRGCYC | 2 cut(s) | 253, 868 |
| BauI | CACGAG | 1 cut(s) | 1029 |
| BbsI | GAAGAC | 1 cut(s) | 398 |
| BbvI | GCAGC | 4 cut(s) | 154, 452, 1007, 1081 |
| BccI | CCATC | 3 cut(s) | 452, 505, 772 |
| BciT130I | CCWGG | 1 cut(s) | 267 |
| BclI | TGATCA | 1 cut(s) | 766 |
| BcnI | CCSGG | 2 cut(s) | 1090, 1091 |
| BcoDI | GTCTC | 1 cut(s) | 236 |
| BfaI | CTAG | 2 cut(s) | 20, 1120 |
| BfoI | RGCGCY | 1 cut(s) | 565 |
| BfuAI | ACCTGC | 1 cut(s) | 179 |
| BisI | GCNGC | 5 cut(s) | 168, 466, 925, 996, 1095 |
| BlsI | GCNGC | 5 cut(s) | 169, 467, 926, 997, 1096 |
| Bme1390I | CCNGG | 3 cut(s) | 267, 1090, 1091 |
| Bme18I | GGWCC | 1 cut(s) | 757 |
| BmeT110I | CYCGRG | 1 cut(s) | 1089 |
| BmgT120I | GGNCC | 2 cut(s) | 631, 757 |
| BmiI | GGNNCC | 2 cut(s) | 632, 867 |
| BmrFI | CCNGG | 3 cut(s) | 267, 1090, 1091 |
| BmrI | ACTGGG | 2 cut(s) | 614, 901 |
| BmsI | GCATC | 2 cut(s) | 226, 1056 |
| BmuI | ACTGGG | 2 cut(s) | 614, 901 |
| BpiI | GAAGAC | 1 cut(s) | 398 |
| BpmI | CTGGAG | 2 cut(s) | 243, 852 |
| Bpu14I | TTCGAA | 1 cut(s) | 659 |
| BpuEI | CTTGAG | 1 cut(s) | 407 |
| BpuMI | CCSGG | 2 cut(s) | 1090, 1091 |
| BsaAI | YACGTR | 1 cut(s) | 626 |
| BsaBI | GATNNNNATC | 1 cut(s) | 98 |
| BsaJI | CCNNGG | 4 cut(s) | 298, 683, 735, 1089 |
| BsaWI | WCCGGW | 1 cut(s) | 56 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 403, 1059 |
| Bse1I | ACTGG | 4 cut(s) | 95, 226, 609, 896 |
| Bse3DI | GCAATG | 1 cut(s) | 499 |
| Bse8I | GATNNNNATC | 1 cut(s) | 98 |
| BseBI | CCWGG | 1 cut(s) | 267 |
| BseDI | CCNNGG | 4 cut(s) | 298, 683, 735, 1089 |
| BseGI | GGATG | 3 cut(s) | 444, 783, 1071 |
| BseJI | GATNNNNATC | 1 cut(s) | 98 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 403, 1059 |
| BseMI | GCAATG | 1 cut(s) | 499 |
| BseMII | CTCAG | 2 cut(s) | 816, 868 |
| BseNI | ACTGG | 4 cut(s) | 95, 226, 609, 896 |
| BseXI | GCAGC | 4 cut(s) | 154, 452, 1007, 1081 |
| BshFI | GGCC | 5 cut(s) | 303, 586, 633, 734, 968 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1089 |
| BsiSI | CCGG | 2 cut(s) | 57, 1090 |
| BslFI | GGGAC | 1 cut(s) | 908 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 403, 1059 |
| BsmAI | GTCTC | 1 cut(s) | 236 |
| BsmFI | GGGAC | 1 cut(s) | 908 |
| BsnI | GGCC | 5 cut(s) | 303, 586, 633, 734, 968 |
| BsoBI | CYCGRG | 1 cut(s) | 1089 |
| Bsp119I | TTCGAA | 1 cut(s) | 659 |
| Bsp1286I | GDGCHC | 2 cut(s) | 253, 868 |
| Bsp143I | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| BspACI | CCGC | 3 cut(s) | 404, 924, 1063 |
| BspANI | GGCC | 5 cut(s) | 303, 586, 633, 734, 968 |
| BspCNI | CTCAG | 2 cut(s) | 817, 867 |
| BspLI | GGNNCC | 2 cut(s) | 632, 867 |
| BspMI | ACCTGC | 1 cut(s) | 179 |
| BspPI | GGATC | 4 cut(s) | 101, 257, 538, 674 |
| BspQI | GCTCTTC | 1 cut(s) | 258 |
| BspT104I | TTCGAA | 1 cut(s) | 659 |
| BsrBI | CCGCTC | 1 cut(s) | 924 |
| BsrDI | GCAATG | 1 cut(s) | 499 |
| BsrI | ACTGG | 4 cut(s) | 95, 226, 609, 896 |
| BssECI | CCNNGG | 4 cut(s) | 298, 683, 735, 1089 |
| BssMI | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| BssSI | CACGAG | 1 cut(s) | 1029 |
| BssT1I | CCWWGG | 3 cut(s) | 298, 683, 735 |
| Bst2BI | CACGAG | 1 cut(s) | 1029 |
| Bst2UI | CCWGG | 1 cut(s) | 267 |
| Bst4CI | ACNGT | 1 cut(s) | 714 |
| Bst6I | CTCTTC | 1 cut(s) | 258 |
| BstBAI | YACGTR | 1 cut(s) | 626 |
| BstBI | TTCGAA | 1 cut(s) | 659 |
| BstC8I | GCNNGC | 1 cut(s) | 86 |
| BstDEI | CTNAG | 5 cut(s) | 259, 516, 825, 854, 1104 |
| BstF5I | GGATG | 3 cut(s) | 444, 783, 1071 |
| BstH2I | RGCGCY | 1 cut(s) | 565 |
| BstHHI | GCGC | 1 cut(s) | 564 |
| BstKTI | GATC | 5 cut(s) | 96, 265, 533, 682, 769 |
| BstMAI | GTCTC | 1 cut(s) | 236 |
| BstMBI | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1100 |
| BstNI | CCWGG | 1 cut(s) | 267 |
| BstNSI | RCATGY | 1 cut(s) | 490 |
| BstSCI | CCNGG | 3 cut(s) | 265, 1088, 1089 |
| BstSNI | TACGTA | 1 cut(s) | 626 |
| BstV1I | GCAGC | 4 cut(s) | 154, 452, 1007, 1081 |
| BstV2I | GAAGAC | 1 cut(s) | 398 |
| BstX2I | RGATCY | 3 cut(s) | 93, 262, 679 |
| BstYI | RGATCY | 3 cut(s) | 93, 262, 679 |
| BsuRI | GGCC | 5 cut(s) | 303, 586, 633, 734, 968 |
| BtsCI | GGATG | 3 cut(s) | 444, 783, 1071 |
| BtsI | GCAGTG | 2 cut(s) | 438, 658 |
| BtsIMutI | CAGTG | 5 cut(s) | 88, 438, 658, 862, 889 |
| BveI | ACCTGC | 1 cut(s) | 179 |
| Cac8I | GCNNGC | 1 cut(s) | 86 |
| CaiI | CAGNNNCTG | 1 cut(s) | 90 |
| CfoI | GCGC | 1 cut(s) | 564 |
| Cfr13I | GGNCC | 2 cut(s) | 631, 757 |
| Cfr9I | CCCGGG | 1 cut(s) | 1089 |
| CseI | GACGC | 2 cut(s) | 22, 33 |
| Csp6I | GTAC | 2 cut(s) | 419, 620 |
| CviAII | CATG | 6 cut(s) | 81, 287, 487, 567, 806, 932 |
| CviQI | GTAC | 2 cut(s) | 419, 620 |
| DdeI | CTNAG | 5 cut(s) | 259, 516, 825, 854, 1104 |
| DpnI | GATC | 5 cut(s) | 95, 264, 532, 681, 768 |
| DpnII | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| Eam1104I | CTCTTC | 1 cut(s) | 258 |
| EarI | CTCTTC | 1 cut(s) | 258 |
| EciI | GGCGGA | 1 cut(s) | 1078 |
| Eco105I | TACGTA | 1 cut(s) | 626 |
| Eco130I | CCWWGG | 3 cut(s) | 298, 683, 735 |
| Eco147I | AGGCCT | 1 cut(s) | 734 |
| Eco24I | GRGCYC | 2 cut(s) | 253, 868 |
| Eco47I | GGWCC | 1 cut(s) | 757 |
| Eco57I | CTGAAG | 1 cut(s) | 354 |
| Eco88I | CYCGRG | 1 cut(s) | 1089 |
| EcoO109I | RGGNCCY | 2 cut(s) | 631, 757 |
| EcoRII | CCWGG | 1 cut(s) | 265 |
| EcoT14I | CCWWGG | 3 cut(s) | 298, 683, 735 |
| EcoT22I | ATGCAT | 2 cut(s) | 504, 937 |
| EcoT38I | GRGCYC | 2 cut(s) | 253, 868 |
| ErhI | CCWWGG | 3 cut(s) | 298, 683, 735 |
| FaeI | CATG | 6 cut(s) | 84, 290, 490, 570, 809, 935 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 369, 401 |
| FaqI | GGGAC | 1 cut(s) | 908 |
| FatI | CATG | 6 cut(s) | 80, 286, 486, 566, 805, 931 |
| FbaI | TGATCA | 1 cut(s) | 766 |
| Fnu4HI | GCNGC | 5 cut(s) | 168, 466, 925, 996, 1095 |
| FokI | GGATG | 3 cut(s) | 431, 790, 1078 |
| FriOI | GRGCYC | 2 cut(s) | 253, 868 |
| Fsp4HI | GCNGC | 5 cut(s) | 168, 466, 925, 996, 1095 |
| FspBI | CTAG | 2 cut(s) | 20, 1120 |
| GlaI | GCGC | 1 cut(s) | 563 |
| GluI | GCNGC | 5 cut(s) | 168, 466, 925, 996, 1095 |
| GsuI | CTGGAG | 2 cut(s) | 243, 852 |
| HaeII | RGCGCY | 1 cut(s) | 565 |
| HaeIII | GGCC | 5 cut(s) | 303, 586, 633, 734, 968 |
| HapII | CCGG | 2 cut(s) | 57, 1090 |
| HgaI | GACGC | 2 cut(s) | 22, 33 |
| HhaI | GCGC | 1 cut(s) | 564 |
| Hin1II | CATG | 6 cut(s) | 84, 290, 490, 570, 809, 935 |
| Hin6I | GCGC | 1 cut(s) | 562 |
| HinP1I | GCGC | 1 cut(s) | 562 |
| HindIII | AAGCTT | 1 cut(s) | 336 |
| HinfI | GANTC | 1 cut(s) | 740 |
| HpaII | CCGG | 2 cut(s) | 57, 1090 |
| Hpy166II | GTNNAC | 2 cut(s) | 602, 717 |
| Hpy188I | TCNGA | 2 cut(s) | 121, 595 |
| Hpy188III | TCNNGA | 8 cut(s) | 72, 103, 274, 364, 614, 770, 869, 919 |
| Hpy8I | GTNNAC | 2 cut(s) | 602, 717 |
| HpyAV | CCTTC | 8 cut(s) | 181, 211, 314, 406, 644, 1006, 1018, 1063 |
| HpyCH4III | ACNGT | 1 cut(s) | 714 |
| HpyCH4IV | ACGT | 1 cut(s) | 625 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1100 |
| HpyF3I | CTNAG | 5 cut(s) | 259, 516, 825, 854, 1104 |
| HpySE526I | ACGT | 1 cut(s) | 625 |
| Hsp92II | CATG | 6 cut(s) | 84, 290, 490, 570, 809, 935 |
| HspAI | GCGC | 1 cut(s) | 562 |
| Ksp22I | TGATCA | 1 cut(s) | 766 |
| Kzo9I | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| LguI | GCTCTTC | 1 cut(s) | 258 |
| LmnI | GCTCC | 1 cut(s) | 871 |
| Lsp1109I | GCAGC | 4 cut(s) | 154, 452, 1007, 1081 |
| LweI | GCATC | 2 cut(s) | 226, 1056 |
| MaeI | CTAG | 2 cut(s) | 20, 1120 |
| MaeII | ACGT | 1 cut(s) | 625 |
| MalI | GATC | 5 cut(s) | 95, 264, 532, 681, 768 |
| MbiI | CCGCTC | 1 cut(s) | 924 |
| MboI | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| MboII | GAAGA | 6 cut(s) | 245, 403, 551, 562, 689, 805 |
| MflI | RGATCY | 3 cut(s) | 93, 262, 679 |
| MhlI | GDGCHC | 2 cut(s) | 253, 868 |
| MluCI | AATT | 5 cut(s) | 140, 474, 762, 798, 961 |
| Mph1103I | ATGCAT | 2 cut(s) | 504, 937 |
| MroXI | GAANNNNTTC | 1 cut(s) | 64 |
| MseI | TTAA | 1 cut(s) | 797 |
| MspA1I | CMGCKG | 1 cut(s) | 998 |
| MspI | CCGG | 2 cut(s) | 57, 1090 |
| MspR9I | CCNGG | 3 cut(s) | 267, 1090, 1091 |
| MvaI | CCWGG | 1 cut(s) | 267 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1100 |
| NciI | CCSGG | 2 cut(s) | 1090, 1091 |
| NdeII | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| NlaIII | CATG | 6 cut(s) | 84, 290, 490, 570, 809, 935 |
| NlaIV | GGNNCC | 2 cut(s) | 632, 867 |
| NsiI | ATGCAT | 2 cut(s) | 504, 937 |
| NspI | RCATGY | 1 cut(s) | 490 |
| NspV | TTCGAA | 1 cut(s) | 659 |
| PaqCI | CACCTGC | 1 cut(s) | 179 |
| PceI | AGGCCT | 1 cut(s) | 734 |
| PciI | ACATGT | 1 cut(s) | 486 |
| PciSI | GCTCTTC | 1 cut(s) | 258 |
| PdmI | GAANNNNTTC | 1 cut(s) | 64 |
| PfeI | GAWTC | 1 cut(s) | 740 |
| PkrI | GCNGC | 5 cut(s) | 169, 467, 926, 997, 1096 |
| Ppu21I | YACGTR | 1 cut(s) | 626 |
| PpuMI | RGGWCCY | 1 cut(s) | 757 |
| PscI | ACATGT | 1 cut(s) | 486 |
| PshBI | ATTAAT | 1 cut(s) | 797 |
| Psp5II | RGGWCCY | 1 cut(s) | 757 |
| Psp6I | CCWGG | 1 cut(s) | 265 |
| PspGI | CCWGG | 1 cut(s) | 265 |
| PspN4I | GGNNCC | 2 cut(s) | 632, 867 |
| PspPI | GGNCC | 2 cut(s) | 631, 757 |
| PspPPI | RGGWCCY | 1 cut(s) | 757 |
| PstNI | CAGNNNCTG | 1 cut(s) | 90 |
| PsuI | RGATCY | 3 cut(s) | 93, 262, 679 |
| PvuII | CAGCTG | 1 cut(s) | 998 |
| RsaI | GTAC | 2 cut(s) | 420, 621 |
| RsaNI | GTAC | 2 cut(s) | 419, 620 |
| SapI | GCTCTTC | 1 cut(s) | 258 |
| SaqAI | TTAA | 1 cut(s) | 797 |
| SatI | GCNGC | 5 cut(s) | 168, 466, 925, 996, 1095 |
| Sau3AI | GATC | 5 cut(s) | 93, 262, 530, 679, 766 |
| Sau96I | GGNCC | 2 cut(s) | 631, 757 |
| ScrFI | CCNGG | 3 cut(s) | 267, 1090, 1091 |
| SduI | GDGCHC | 2 cut(s) | 253, 868 |
| SfaNI | GCATC | 2 cut(s) | 226, 1056 |
| SfuI | TTCGAA | 1 cut(s) | 659 |
| SinI | GGWCC | 1 cut(s) | 757 |
| SmaI | CCCGGG | 1 cut(s) | 1091 |
| SmlI | CTYRAG | 1 cut(s) | 386 |
| SmoI | CTYRAG | 1 cut(s) | 386 |
| SnaBI | TACGTA | 1 cut(s) | 626 |
| Sse9I | AATT | 5 cut(s) | 140, 474, 762, 798, 961 |
| SseBI | AGGCCT | 1 cut(s) | 734 |
| SsiI | CCGC | 3 cut(s) | 404, 924, 1063 |
| SspI | AATATT | 2 cut(s) | 113, 664 |
| SspMI | CTAG | 2 cut(s) | 20, 1120 |
| StuI | AGGCCT | 1 cut(s) | 734 |
| StyD4I | CCNGG | 3 cut(s) | 265, 1088, 1089 |
| StyI | CCWWGG | 3 cut(s) | 298, 683, 735 |
| TaaI | ACNGT | 1 cut(s) | 714 |
| TaiI | ACGT | 1 cut(s) | 628 |
| TaqI | TCGA | 5 cut(s) | 71, 174, 273, 533, 659 |
| TasI | AATT | 5 cut(s) | 140, 474, 762, 798, 961 |
| TauI | GCSGC | 1 cut(s) | 927 |
| TfiI | GAWTC | 1 cut(s) | 740 |
| Tru1I | TTAA | 1 cut(s) | 797 |
| Tru9I | TTAA | 1 cut(s) | 797 |
| TscAI | CASTG | 5 cut(s) | 95, 438, 658, 862, 896 |
| TseI | GCWGC | 4 cut(s) | 167, 465, 995, 1094 |
| TspDTI | ATGAA | 4 cut(s) | 57, 510, 822, 1045 |
| TspMI | CCCGGG | 1 cut(s) | 1089 |
| TspRI | CASTG | 5 cut(s) | 95, 438, 658, 862, 896 |
| VpaK11BI | GGWCC | 1 cut(s) | 757 |
| VspI | ATTAAT | 1 cut(s) | 797 |
| XapI | RAATTY | 2 cut(s) | 474, 961 |
| XceI | RCATGY | 1 cut(s) | 490 |
| XmaI | CCCGGG | 1 cut(s) | 1089 |
| XmnI | GAANNNNTTC | 1 cut(s) | 64 |
| XspI | CTAG | 2 cut(s) | 20, 1120 |
| Zsp2I | ATGCAT | 2 cut(s) | 504, 937 |