Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 355 |
| Acc36I | ACCTGC | 1 cut(s) | 194 |
| AclWI | GGATC | 2 cut(s) | 545, 558 |
| AfaI | GTAC | 2 cut(s) | 110, 232 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 51 |
| AgsI | TTSAA | 5 cut(s) | 10, 70, 290, 314, 543 |
| AjnI | CCWGG | 1 cut(s) | 104 |
| AluBI | AGCT | 1 cut(s) | 431 |
| AluI | AGCT | 1 cut(s) | 431 |
| AlwI | GGATC | 2 cut(s) | 545, 558 |
| AoxI | GGCC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 362 |
| AseI | ATTAAT | 1 cut(s) | 333 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 525 |
| AsuHPI | GGTGA | 1 cut(s) | 375 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 222, 255 |
| BamHI | GGATCC | 1 cut(s) | 550 |
| BbvI | GCAGC | 1 cut(s) | 349 |
| BccI | CCATC | 2 cut(s) | 207, 221 |
| BciT130I | CCWGG | 1 cut(s) | 106 |
| BfaI | CTAG | 1 cut(s) | 504 |
| BfmI | CTRYAG | 1 cut(s) | 339 |
| BfuAI | ACCTGC | 1 cut(s) | 194 |
| BisI | GCNGC | 1 cut(s) | 363 |
| BlsI | GCNGC | 1 cut(s) | 364 |
| Bme1390I | CCNGG | 1 cut(s) | 106 |
| BmiI | GGNNCC | 1 cut(s) | 552 |
| BmrFI | CCNGG | 1 cut(s) | 106 |
| BsaWI | WCCGGW | 1 cut(s) | 385 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 125, 155 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 51 |
| Bse3DI | GCAATG | 1 cut(s) | 84 |
| BseBI | CCWGG | 1 cut(s) | 106 |
| BseGI | GGATG | 1 cut(s) | 360 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 51 |
| BseMI | GCAATG | 1 cut(s) | 84 |
| BseXI | GCAGC | 1 cut(s) | 349 |
| BshFI | GGCC | 1 cut(s) | 190 |
| BsiSI | CCGG | 1 cut(s) | 386 |
| BslFI | GGGAC | 1 cut(s) | 316 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 51 |
| BsmFI | GGGAC | 1 cut(s) | 316 |
| BsnI | GGCC | 1 cut(s) | 190 |
| Bsp143I | GATC | 3 cut(s) | 325, 343, 550 |
| BspANI | GGCC | 1 cut(s) | 190 |
| BspLI | GGNNCC | 1 cut(s) | 552 |
| BspMI | ACCTGC | 1 cut(s) | 194 |
| BspPI | GGATC | 2 cut(s) | 545, 558 |
| BsrDI | GCAATG | 1 cut(s) | 84 |
| BssMI | GATC | 3 cut(s) | 325, 343, 550 |
| Bst2UI | CCWGG | 1 cut(s) | 106 |
| Bst4CI | ACNGT | 2 cut(s) | 319, 481 |
| BstC8I | GCNNGC | 1 cut(s) | 42 |
| BstF5I | GGATG | 1 cut(s) | 360 |
| BstKTI | GATC | 3 cut(s) | 328, 346, 553 |
| BstMBI | GATC | 3 cut(s) | 325, 343, 550 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 46 |
| BstNI | CCWGG | 1 cut(s) | 106 |
| BstSCI | CCNGG | 1 cut(s) | 104 |
| BstSFI | CTRYAG | 1 cut(s) | 339 |
| BstV1I | GCAGC | 1 cut(s) | 349 |
| BstX2I | RGATCY | 1 cut(s) | 550 |
| BstYI | RGATCY | 1 cut(s) | 550 |
| BsuRI | GGCC | 1 cut(s) | 190 |
| BtsCI | GGATG | 1 cut(s) | 360 |
| BtsIMutI | CAGTG | 1 cut(s) | 477 |
| BveI | ACCTGC | 1 cut(s) | 194 |
| Cac8I | GCNNGC | 1 cut(s) | 42 |
| Csp6I | GTAC | 2 cut(s) | 109, 231 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 264, 299 |
| CviJI | RGCY | 4 cut(s) | 104, 190, 323, 431 |
| CviKI_1 | RGCY | 4 cut(s) | 104, 190, 323, 431 |
| CviQI | GTAC | 2 cut(s) | 109, 231 |
| DpnI | GATC | 3 cut(s) | 327, 345, 552 |
| DpnII | GATC | 3 cut(s) | 325, 343, 550 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 355 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 355 |
| EcoRII | CCWGG | 1 cut(s) | 104 |
| FaiI | YATR | 8 cut(s) | 21, 38, 97, 209, 372, 409, 434, 451 |
| FaqI | GGGAC | 1 cut(s) | 316 |
| Fnu4HI | GCNGC | 1 cut(s) | 363 |
| FokI | GGATG | 1 cut(s) | 367 |
| Fsp4HI | GCNGC | 1 cut(s) | 363 |
| FspBI | CTAG | 1 cut(s) | 504 |
| GluI | GCNGC | 1 cut(s) | 363 |
| HaeIII | GGCC | 1 cut(s) | 190 |
| HapII | CCGG | 1 cut(s) | 386 |
| HinfI | GANTC | 4 cut(s) | 262, 286, 421, 454 |
| HpaII | CCGG | 1 cut(s) | 386 |
| HphI | GGTGA | 1 cut(s) | 375 |
| Hpy166II | GTNNAC | 2 cut(s) | 233, 275 |
| Hpy188I | TCNGA | 1 cut(s) | 348 |
| Hpy188III | TCNNGA | 2 cut(s) | 458, 543 |
| Hpy8I | GTNNAC | 2 cut(s) | 233, 275 |
| HpyCH4III | ACNGT | 2 cut(s) | 319, 481 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 46 |
| Kzo9I | GATC | 3 cut(s) | 325, 343, 550 |
| LpnPI | CCDG | 8 cut(s) | 91, 118, 189, 284, 399, 450, 471, 503 |
| Lsp1109I | GCAGC | 1 cut(s) | 349 |
| MaeI | CTAG | 1 cut(s) | 504 |
| MalI | GATC | 3 cut(s) | 327, 345, 552 |
| MboI | GATC | 3 cut(s) | 325, 343, 550 |
| MfeI | CAATTG | 1 cut(s) | 256 |
| MflI | RGATCY | 1 cut(s) | 550 |
| MluCI | AATT | 9 cut(s) | 76, 92, 192, 219, 256, 268, 334, 390, 443 |
| MlyI | GAGTC | 2 cut(s) | 430, 463 |
| MnlI | CCTC | 6 cut(s) | 51, 126, 127, 192, 460, 539 |
| MroXI | GAANNNNTTC | 1 cut(s) | 525 |
| MseI | TTAA | 2 cut(s) | 240, 333 |
| MspI | CCGG | 1 cut(s) | 386 |
| MspR9I | CCNGG | 1 cut(s) | 106 |
| MunI | CAATTG | 1 cut(s) | 256 |
| MvaI | CCWGG | 1 cut(s) | 106 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 46 |
| NdeII | GATC | 3 cut(s) | 325, 343, 550 |
| NlaIV | GGNNCC | 1 cut(s) | 552 |
| PdmI | GAANNNNTTC | 1 cut(s) | 525 |
| PfeI | GAWTC | 2 cut(s) | 262, 286 |
| PkrI | GCNGC | 1 cut(s) | 364 |
| PleI | GAGTC | 2 cut(s) | 429, 462 |
| PpsI | GAGTC | 2 cut(s) | 429, 462 |
| PshBI | ATTAAT | 1 cut(s) | 333 |
| Psp6I | CCWGG | 1 cut(s) | 104 |
| PspGI | CCWGG | 1 cut(s) | 104 |
| PspN4I | GGNNCC | 1 cut(s) | 552 |
| PsuI | RGATCY | 1 cut(s) | 550 |
| RsaI | GTAC | 2 cut(s) | 110, 232 |
| RsaNI | GTAC | 2 cut(s) | 109, 231 |
| SaqAI | TTAA | 2 cut(s) | 240, 333 |
| SatI | GCNGC | 1 cut(s) | 363 |
| Sau3AI | GATC | 3 cut(s) | 325, 343, 550 |
| SchI | GAGTC | 2 cut(s) | 430, 463 |
| ScrFI | CCNGG | 1 cut(s) | 106 |
| SetI | ASST | 7 cut(s) | 33, 110, 208, 296, 433, 494, 516 |
| SfcI | CTRYAG | 1 cut(s) | 339 |
| Sse9I | AATT | 9 cut(s) | 76, 92, 192, 219, 256, 268, 334, 390, 443 |
| SspI | AATATT | 1 cut(s) | 244 |
| SspMI | CTAG | 1 cut(s) | 504 |
| StyD4I | CCNGG | 1 cut(s) | 104 |
| TaaI | ACNGT | 2 cut(s) | 319, 481 |
| TasI | AATT | 9 cut(s) | 76, 92, 192, 219, 256, 268, 334, 390, 443 |
| TfiI | GAWTC | 2 cut(s) | 262, 286 |
| Tru1I | TTAA | 2 cut(s) | 240, 333 |
| Tru9I | TTAA | 2 cut(s) | 240, 333 |
| TscAI | CASTG | 1 cut(s) | 484 |
| TseI | GCWGC | 1 cut(s) | 362 |
| TspDTI | ATGAA | 1 cut(s) | 359 |
| TspRI | CASTG | 1 cut(s) | 484 |
| VspI | ATTAAT | 1 cut(s) | 333 |
| XmnI | GAANNNNTTC | 1 cut(s) | 525 |
| XspI | CTAG | 1 cut(s) | 504 |