Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcyI | GRCGYC | 1 cut(s) | 150 |
| AfaI | GTAC | 1 cut(s) | 75 |
| AgsI | TTSAA | 1 cut(s) | 170 |
| AluBI | AGCT | 3 cut(s) | 113, 188, 273 |
| AluI | AGCT | 3 cut(s) | 113, 188, 273 |
| ApeKI | GCWGC | 1 cut(s) | 56 |
| BbvI | GCAGC | 1 cut(s) | 43 |
| BccI | CCATC | 1 cut(s) | 237 |
| BfmI | CTRYAG | 1 cut(s) | 189 |
| BisI | GCNGC | 1 cut(s) | 57 |
| BlsI | GCNGC | 1 cut(s) | 58 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BsaHI | GRCGYC | 1 cut(s) | 150 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| Bse3DI | GCAATG | 2 cut(s) | 51, 207 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 86 |
| BseMI | GCAATG | 2 cut(s) | 51, 207 |
| BseRI | GAGGAG | 1 cut(s) | 27 |
| BseXI | GCAGC | 1 cut(s) | 43 |
| BseYI | CCCAGC | 1 cut(s) | 233 |
| Bsp1407I | TGTACA | 1 cut(s) | 73 |
| Bsp19I | CCATGG | 1 cut(s) | 144 |
| BsrDI | GCAATG | 2 cut(s) | 51, 207 |
| BsrGI | TGTACA | 1 cut(s) | 73 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssNI | GRCGYC | 1 cut(s) | 150 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst6I | CTCTTC | 1 cut(s) | 189 |
| BstACI | GRCGYC | 1 cut(s) | 150 |
| BstAUI | TGTACA | 1 cut(s) | 73 |
| BstDEI | CTNAG | 3 cut(s) | 29, 93, 181 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstF5I | GGATG | 1 cut(s) | 86 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 62 |
| BstSFI | CTRYAG | 1 cut(s) | 189 |
| BstV1I | GCAGC | 1 cut(s) | 43 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 86 |
| CseI | GACGC | 1 cut(s) | 139 |
| Csp6I | GTAC | 1 cut(s) | 74 |
| CviAII | CATG | 4 cut(s) | 98, 145, 230, 280 |
| CviJI | RGCY | 4 cut(s) | 113, 188, 247, 273 |
| CviKI_1 | RGCY | 4 cut(s) | 113, 188, 247, 273 |
| CviQI | GTAC | 1 cut(s) | 74 |
| DdeI | CTNAG | 3 cut(s) | 29, 93, 181 |
| DraI | TTTAAA | 1 cut(s) | 117 |
| Eam1104I | CTCTTC | 1 cut(s) | 189 |
| EarI | CTCTTC | 1 cut(s) | 189 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 4 cut(s) | 101, 148, 233, 283 |
| FaiI | YATR | 8 cut(s) | 81, 99, 146, 191, 216, 231, 250, 281 |
| FatI | CATG | 4 cut(s) | 97, 144, 229, 279 |
| Fnu4HI | GCNGC | 1 cut(s) | 57 |
| FokI | GGATG | 1 cut(s) | 73 |
| Fsp4HI | GCNGC | 1 cut(s) | 57 |
| GluI | GCNGC | 1 cut(s) | 57 |
| GsaI | CCCAGC | 1 cut(s) | 237 |
| HgaI | GACGC | 1 cut(s) | 139 |
| Hin1I | GRCGYC | 1 cut(s) | 150 |
| Hin1II | CATG | 4 cut(s) | 101, 148, 233, 283 |
| HindIII | AAGCTT | 2 cut(s) | 111, 271 |
| HpyAV | CCTTC | 1 cut(s) | 116 |
| HpyCH4V | TGCA | 3 cut(s) | 38, 65, 252 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 62 |
| HpyF3I | CTNAG | 3 cut(s) | 29, 93, 181 |
| Hsp92I | GRCGYC | 1 cut(s) | 150 |
| Hsp92II | CATG | 4 cut(s) | 101, 148, 233, 283 |
| LpnPI | CCDG | 2 cut(s) | 84, 219 |
| Lsp1109I | GCAGC | 1 cut(s) | 43 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeIII | GTNAC | 1 cut(s) | 160 |
| MboII | GAAGA | 1 cut(s) | 206 |
| MfeI | CAATTG | 1 cut(s) | 165 |
| MluCI | AATT | 3 cut(s) | 104, 165, 211 |
| MnlI | CCTC | 6 cut(s) | 5, 94, 100, 190, 256, 276 |
| MseI | TTAA | 3 cut(s) | 116, 239, 269 |
| MunI | CAATTG | 1 cut(s) | 165 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 62 |
| NcoI | CCATGG | 1 cut(s) | 144 |
| NlaIII | CATG | 4 cut(s) | 101, 148, 233, 283 |
| NmuCI | GTSAC | 1 cut(s) | 160 |
| PkrI | GCNGC | 1 cut(s) | 58 |
| PspFI | CCCAGC | 1 cut(s) | 233 |
| RsaI | GTAC | 1 cut(s) | 75 |
| RsaNI | GTAC | 1 cut(s) | 74 |
| SaqAI | TTAA | 3 cut(s) | 116, 239, 269 |
| SatI | GCNGC | 1 cut(s) | 57 |
| SetI | ASST | 5 cut(s) | 115, 127, 190, 275, 287 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SfcI | CTRYAG | 1 cut(s) | 189 |
| SgeI | CNNG | 6 cut(s) | 83, 110, 122, 157, 242, 246 |
| Sse9I | AATT | 3 cut(s) | 104, 165, 211 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TasI | AATT | 3 cut(s) | 104, 165, 211 |
| TatI | WGTACW | 1 cut(s) | 73 |
| Tru1I | TTAA | 3 cut(s) | 116, 239, 269 |
| Tru9I | TTAA | 3 cut(s) | 116, 239, 269 |
| TseFI | GTSAC | 1 cut(s) | 160 |
| TseI | GCWGC | 1 cut(s) | 56 |
| Tsp45I | GTSAC | 1 cut(s) | 160 |
| TspDTI | ATGAA | 3 cut(s) | 40, 75, 218 |