Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 2 cut(s) | 74, 171 |
| AjnI | CCWGG | 1 cut(s) | 181 |
| AluBI | AGCT | 4 cut(s) | 28, 94, 224, 239 |
| AluI | AGCT | 4 cut(s) | 28, 94, 224, 239 |
| Alw26I | GTCTC | 3 cut(s) | 62, 112, 129 |
| ApeKI | GCWGC | 1 cut(s) | 224 |
| AspLEI | GCGC | 1 cut(s) | 18 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BciT130I | CCWGG | 1 cut(s) | 183 |
| BcoDI | GTCTC | 3 cut(s) | 62, 112, 129 |
| BfaI | CTAG | 1 cut(s) | 299 |
| BfmI | CTRYAG | 1 cut(s) | 315 |
| BisI | GCNGC | 1 cut(s) | 225 |
| BlsI | GCNGC | 1 cut(s) | 226 |
| Bme1390I | CCNGG | 1 cut(s) | 183 |
| BmrFI | CCNGG | 1 cut(s) | 183 |
| BpuEI | CTTGAG | 1 cut(s) | 64 |
| Bsa29I | ATCGAT | 1 cut(s) | 322 |
| BsaI | GGTCTC | 1 cut(s) | 62 |
| BseBI | CCWGG | 1 cut(s) | 183 |
| BseCI | ATCGAT | 1 cut(s) | 322 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BsgI | GTGCAG | 1 cut(s) | 119 |
| Bsh1285I | CGRYCG | 1 cut(s) | 258 |
| BshVI | ATCGAT | 1 cut(s) | 322 |
| BsiEI | CGRYCG | 1 cut(s) | 258 |
| BsmAI | GTCTC | 3 cut(s) | 62, 112, 129 |
| Bso31I | GGTCTC | 1 cut(s) | 62 |
| Bsp143I | GATC | 1 cut(s) | 319 |
| BspDI | ATCGAT | 1 cut(s) | 322 |
| BspHI | TCATGA | 1 cut(s) | 75 |
| BspMAI | CTGCAG | 1 cut(s) | 319 |
| BspTNI | GGTCTC | 1 cut(s) | 62 |
| BssMI | GATC | 1 cut(s) | 319 |
| Bst2UI | CCWGG | 1 cut(s) | 183 |
| BstC8I | GCNNGC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 1 cut(s) | 137 |
| BstHHI | GCGC | 1 cut(s) | 18 |
| BstKTI | GATC | 1 cut(s) | 322 |
| BstMAI | GTCTC | 3 cut(s) | 62, 112, 129 |
| BstMBI | GATC | 1 cut(s) | 319 |
| BstMCI | CGRYCG | 1 cut(s) | 258 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstNI | CCWGG | 1 cut(s) | 183 |
| BstSCI | CCNGG | 1 cut(s) | 181 |
| BstSFI | CTRYAG | 1 cut(s) | 315 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| Bsu15I | ATCGAT | 1 cut(s) | 322 |
| BsuTUI | ATCGAT | 1 cut(s) | 322 |
| Cac8I | GCNNGC | 1 cut(s) | 102 |
| CciI | TCATGA | 1 cut(s) | 75 |
| CfoI | GCGC | 1 cut(s) | 18 |
| ClaI | ATCGAT | 1 cut(s) | 322 |
| CsiI | ACCWGGT | 1 cut(s) | 181 |
| CviAII | CATG | 2 cut(s) | 53, 76 |
| CviJI | RGCY | 5 cut(s) | 28, 94, 161, 224, 239 |
| CviKI_1 | RGCY | 5 cut(s) | 28, 94, 161, 224, 239 |
| DdeI | CTNAG | 1 cut(s) | 137 |
| DpnI | GATC | 1 cut(s) | 321 |
| DpnII | GATC | 1 cut(s) | 319 |
| Eco31I | GGTCTC | 1 cut(s) | 62 |
| Eco32I | GATATC | 1 cut(s) | 50 |
| Eco57I | CTGAAG | 2 cut(s) | 74, 171 |
| EcoRII | CCWGG | 1 cut(s) | 181 |
| EcoRV | GATATC | 1 cut(s) | 50 |
| FaeI | CATG | 2 cut(s) | 56, 79 |
| FaiI | YATR | 5 cut(s) | 54, 77, 173, 231, 245 |
| FatI | CATG | 2 cut(s) | 52, 75 |
| Fnu4HI | GCNGC | 1 cut(s) | 225 |
| Fsp4HI | GCNGC | 1 cut(s) | 225 |
| FspBI | CTAG | 1 cut(s) | 299 |
| GlaI | GCGC | 1 cut(s) | 17 |
| GluI | GCNGC | 1 cut(s) | 225 |
| HhaI | GCGC | 1 cut(s) | 18 |
| Hin1II | CATG | 2 cut(s) | 56, 79 |
| Hin6I | GCGC | 1 cut(s) | 16 |
| HinP1I | GCGC | 1 cut(s) | 16 |
| HindIII | AAGCTT | 1 cut(s) | 26 |
| HinfI | GANTC | 1 cut(s) | 83 |
| Hpy188I | TCNGA | 1 cut(s) | 151 |
| Hpy188III | TCNNGA | 3 cut(s) | 76, 209, 299 |
| HpyAV | CCTTC | 2 cut(s) | 202, 206 |
| HpyCH4V | TGCA | 4 cut(s) | 100, 133, 175, 317 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpyF3I | CTNAG | 1 cut(s) | 137 |
| Hsp92II | CATG | 2 cut(s) | 56, 79 |
| HspAI | GCGC | 1 cut(s) | 16 |
| Kzo9I | GATC | 1 cut(s) | 319 |
| LpnPI | CCDG | 5 cut(s) | 26, 80, 86, 168, 195 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| MabI | ACCWGGT | 1 cut(s) | 181 |
| MaeI | CTAG | 1 cut(s) | 299 |
| MalI | GATC | 1 cut(s) | 321 |
| MboI | GATC | 1 cut(s) | 319 |
| MboII | GAAGA | 2 cut(s) | 164, 273 |
| MluCI | AATT | 1 cut(s) | 176 |
| MnlI | CCTC | 1 cut(s) | 295 |
| MspA1I | CMGCKG | 1 cut(s) | 94 |
| MspR9I | CCNGG | 1 cut(s) | 183 |
| MvaI | CCWGG | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeII | GATC | 1 cut(s) | 319 |
| NlaIII | CATG | 2 cut(s) | 56, 79 |
| PagI | TCATGA | 1 cut(s) | 75 |
| PfeI | GAWTC | 1 cut(s) | 83 |
| PkrI | GCNGC | 1 cut(s) | 226 |
| Psp6I | CCWGG | 1 cut(s) | 181 |
| PspGI | CCWGG | 1 cut(s) | 181 |
| PstI | CTGCAG | 1 cut(s) | 319 |
| PvuII | CAGCTG | 1 cut(s) | 94 |
| SatI | GCNGC | 1 cut(s) | 225 |
| Sau3AI | GATC | 1 cut(s) | 319 |
| ScrFI | CCNGG | 1 cut(s) | 183 |
| SetI | ASST | 9 cut(s) | 30, 96, 187, 206, 217, 226, 241, 265, 295 |
| SexAI | ACCWGGT | 1 cut(s) | 181 |
| SfcI | CTRYAG | 1 cut(s) | 315 |
| SmlI | CTYRAG | 1 cut(s) | 43 |
| SmoI | CTYRAG | 1 cut(s) | 43 |
| Sse9I | AATT | 1 cut(s) | 176 |
| SspMI | CTAG | 1 cut(s) | 299 |
| StyD4I | CCNGG | 1 cut(s) | 181 |
| TaqI | TCGA | 2 cut(s) | 23, 322 |
| TaqII | GACCGA | 1 cut(s) | 272 |
| TasI | AATT | 1 cut(s) | 176 |
| TfiI | GAWTC | 1 cut(s) | 83 |
| TseI | GCWGC | 1 cut(s) | 224 |
| TspDTI | ATGAA | 2 cut(s) | 64, 234 |
| TspGWI | ACGGA | 1 cut(s) | 105 |
| XbaI | TCTAGA | 1 cut(s) | 298 |
| XspI | CTAG | 1 cut(s) | 299 |