Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 297 |
| AciI | CCGC | 3 cut(s) | 14, 122, 303 |
| AclWI | GGATC | 1 cut(s) | 61 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AgsI | TTSAA | 2 cut(s) | 290, 323 |
| AjnI | CCWGG | 1 cut(s) | 69 |
| AluBI | AGCT | 6 cut(s) | 31, 64, 100, 114, 177, 272 |
| AluI | AGCT | 6 cut(s) | 31, 64, 100, 114, 177, 272 |
| Alw21I | GWGCWC | 1 cut(s) | 102 |
| AlwI | GGATC | 1 cut(s) | 61 |
| AoxI | GGCC | 2 cut(s) | 39, 281 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 57 |
| AspLEI | GCGC | 1 cut(s) | 298 |
| AspS9I | GGNCC | 1 cut(s) | 88 |
| AsuHPI | GGTGA | 1 cut(s) | 247 |
| AvaII | GGWCC | 1 cut(s) | 88 |
| BanII | GRGCYC | 1 cut(s) | 102 |
| Bbv12I | GWGCWC | 1 cut(s) | 102 |
| BccI | CCATC | 1 cut(s) | 73 |
| BceAI | ACGGC | 1 cut(s) | 268 |
| BciT130I | CCWGG | 1 cut(s) | 71 |
| BfaI | CTAG | 1 cut(s) | 174 |
| BisI | GCNGC | 1 cut(s) | 15 |
| BlsI | GCNGC | 1 cut(s) | 16 |
| Bme1390I | CCNGG | 1 cut(s) | 71 |
| Bme18I | GGWCC | 1 cut(s) | 88 |
| BmgT120I | GGNCC | 1 cut(s) | 88 |
| BmrFI | CCNGG | 1 cut(s) | 71 |
| BmsI | GCATC | 1 cut(s) | 163 |
| BpmI | CTGGAG | 1 cut(s) | 92 |
| BpuEI | CTTGAG | 1 cut(s) | 226 |
| Bse1I | ACTGG | 1 cut(s) | 35 |
| BseBI | CCWGG | 1 cut(s) | 71 |
| BseNI | ACTGG | 1 cut(s) | 35 |
| BshFI | GGCC | 2 cut(s) | 41, 283 |
| BsiHKAI | GWGCWC | 1 cut(s) | 102 |
| BsnI | GGCC | 2 cut(s) | 41, 283 |
| Bsp1286I | GDGCHC | 1 cut(s) | 102 |
| Bsp143I | GATC | 1 cut(s) | 66 |
| BspACI | CCGC | 3 cut(s) | 14, 122, 303 |
| BspANI | GGCC | 2 cut(s) | 41, 283 |
| BspPI | GGATC | 1 cut(s) | 61 |
| BspQI | GCTCTTC | 1 cut(s) | 107 |
| BsrI | ACTGG | 1 cut(s) | 35 |
| BssMI | GATC | 1 cut(s) | 66 |
| Bst2UI | CCWGG | 1 cut(s) | 71 |
| Bst6I | CTCTTC | 1 cut(s) | 107 |
| BstC8I | GCNNGC | 1 cut(s) | 12 |
| BstHHI | GCGC | 1 cut(s) | 298 |
| BstKTI | GATC | 1 cut(s) | 69 |
| BstMBI | GATC | 1 cut(s) | 66 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 302 |
| BstNI | CCWGG | 1 cut(s) | 71 |
| BstSCI | CCNGG | 1 cut(s) | 69 |
| BsuRI | GGCC | 2 cut(s) | 41, 283 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Cac8I | GCNNGC | 1 cut(s) | 12 |
| CfoI | GCGC | 1 cut(s) | 298 |
| Cfr13I | GGNCC | 1 cut(s) | 88 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviAII | CATG | 1 cut(s) | 46 |
| CviJI | RGCY | 9 cut(s) | 31, 41, 64, 100, 114, 177, 272, 283, 361 |
| CviKI_1 | RGCY | 9 cut(s) | 31, 41, 64, 100, 114, 177, 272, 283, 361 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DpnI | GATC | 1 cut(s) | 68 |
| DpnII | GATC | 1 cut(s) | 66 |
| DraI | TTTAAA | 1 cut(s) | 309 |
| Eam1104I | CTCTTC | 1 cut(s) | 107 |
| EarI | CTCTTC | 1 cut(s) | 107 |
| Ecl136II | GAGCTC | 1 cut(s) | 100 |
| Eco24I | GRGCYC | 1 cut(s) | 102 |
| Eco47I | GGWCC | 1 cut(s) | 88 |
| Eco53kI | GAGCTC | 1 cut(s) | 100 |
| EcoICRI | GAGCTC | 1 cut(s) | 100 |
| EcoRII | CCWGG | 1 cut(s) | 69 |
| EcoT38I | GRGCYC | 1 cut(s) | 102 |
| FaeI | CATG | 1 cut(s) | 49 |
| FaiI | YATR | 5 cut(s) | 47, 118, 275, 294, 314 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 345 |
| FatI | CATG | 1 cut(s) | 45 |
| Fnu4HI | GCNGC | 1 cut(s) | 15 |
| FriOI | GRGCYC | 1 cut(s) | 102 |
| Fsp4HI | GCNGC | 1 cut(s) | 15 |
| FspAI | RTGCGCAY | 1 cut(s) | 297 |
| FspBI | CTAG | 1 cut(s) | 174 |
| FspI | TGCGCA | 1 cut(s) | 297 |
| GlaI | GCGC | 1 cut(s) | 297 |
| GluI | GCNGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 1 cut(s) | 92 |
| HaeIII | GGCC | 2 cut(s) | 41, 283 |
| HhaI | GCGC | 1 cut(s) | 298 |
| Hin1II | CATG | 1 cut(s) | 49 |
| Hin6I | GCGC | 1 cut(s) | 296 |
| HinP1I | GCGC | 1 cut(s) | 296 |
| HindIII | AAGCTT | 2 cut(s) | 29, 112 |
| HinfI | GANTC | 4 cut(s) | 58, 74, 184, 264 |
| HphI | GGTGA | 1 cut(s) | 247 |
| Hpy188I | TCNGA | 1 cut(s) | 133 |
| HpyAV | CCTTC | 2 cut(s) | 43, 214 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 302 |
| Hsp92II | CATG | 1 cut(s) | 49 |
| HspAI | GCGC | 1 cut(s) | 296 |
| Kzo9I | GATC | 1 cut(s) | 66 |
| LguI | GCTCTTC | 1 cut(s) | 107 |
| LmnI | GCTCC | 1 cut(s) | 133 |
| LpnPI | CCDG | 3 cut(s) | 48, 56, 83 |
| LweI | GCATC | 1 cut(s) | 163 |
| MaeI | CTAG | 1 cut(s) | 174 |
| MalI | GATC | 1 cut(s) | 68 |
| MboI | GATC | 1 cut(s) | 66 |
| MboII | GAAGA | 4 cut(s) | 94, 97, 153, 365 |
| MhlI | GDGCHC | 1 cut(s) | 102 |
| MluCI | AATT | 2 cut(s) | 169, 228 |
| MlyI | GAGTC | 2 cut(s) | 83, 178 |
| MmeI | TCCRAC | 1 cut(s) | 111 |
| MnlI | CCTC | 2 cut(s) | 52, 310 |
| MroXI | GAANNNNTTC | 1 cut(s) | 57 |
| MseI | TTAA | 3 cut(s) | 168, 216, 308 |
| MspA1I | CMGCKG | 1 cut(s) | 64 |
| MspR9I | CCNGG | 1 cut(s) | 71 |
| MvaI | CCWGG | 1 cut(s) | 71 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 302 |
| NdeII | GATC | 1 cut(s) | 66 |
| NlaIII | CATG | 1 cut(s) | 49 |
| NsbI | TGCGCA | 1 cut(s) | 297 |
| PciSI | GCTCTTC | 1 cut(s) | 107 |
| PdmI | GAANNNNTTC | 1 cut(s) | 57 |
| PfeI | GAWTC | 2 cut(s) | 58, 264 |
| PfoI | TCCNGGA | 1 cut(s) | 69 |
| PkrI | GCNGC | 1 cut(s) | 16 |
| PleI | GAGTC | 2 cut(s) | 82, 178 |
| PpsI | GAGTC | 2 cut(s) | 82, 178 |
| Psp124BI | GAGCTC | 1 cut(s) | 102 |
| Psp6I | CCWGG | 1 cut(s) | 69 |
| PspGI | CCWGG | 1 cut(s) | 69 |
| PspPI | GGNCC | 1 cut(s) | 88 |
| PvuII | CAGCTG | 1 cut(s) | 64 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| SacI | GAGCTC | 1 cut(s) | 102 |
| SapI | GCTCTTC | 1 cut(s) | 107 |
| SaqAI | TTAA | 3 cut(s) | 168, 216, 308 |
| SatI | GCNGC | 1 cut(s) | 15 |
| Sau3AI | GATC | 1 cut(s) | 66 |
| Sau96I | GGNCC | 1 cut(s) | 88 |
| SchI | GAGTC | 2 cut(s) | 83, 178 |
| ScrFI | CCNGG | 1 cut(s) | 71 |
| SduI | GDGCHC | 1 cut(s) | 102 |
| SetI | ASST | 9 cut(s) | 33, 66, 102, 116, 147, 179, 259, 274, 321 |
| SfaNI | GCATC | 1 cut(s) | 163 |
| SinI | GGWCC | 1 cut(s) | 88 |
| SmlI | CTYRAG | 1 cut(s) | 205 |
| SmoI | CTYRAG | 1 cut(s) | 205 |
| Sse9I | AATT | 2 cut(s) | 169, 228 |
| SsiI | CCGC | 3 cut(s) | 14, 122, 303 |
| SspMI | CTAG | 1 cut(s) | 174 |
| SstI | GAGCTC | 1 cut(s) | 102 |
| StyD4I | CCNGG | 1 cut(s) | 69 |
| TaqI | TCGA | 1 cut(s) | 77 |
| TasI | AATT | 2 cut(s) | 169, 228 |
| TauI | GCSGC | 1 cut(s) | 17 |
| TfiI | GAWTC | 2 cut(s) | 58, 264 |
| Tru1I | TTAA | 3 cut(s) | 168, 216, 308 |
| Tru9I | TTAA | 3 cut(s) | 168, 216, 308 |
| TscAI | CASTG | 1 cut(s) | 42 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| TspRI | CASTG | 1 cut(s) | 42 |
| VpaK11BI | GGWCC | 1 cut(s) | 88 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 34 |
| XmnI | GAANNNNTTC | 1 cut(s) | 57 |
| XspI | CTAG | 1 cut(s) | 174 |