Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 126 |
| AfaI | GTAC | 1 cut(s) | 298 |
| AgsI | TTSAA | 1 cut(s) | 236 |
| AluBI | AGCT | 3 cut(s) | 170, 206, 386 |
| AluI | AGCT | 3 cut(s) | 170, 206, 386 |
| Alw26I | GTCTC | 1 cut(s) | 26 |
| AoxI | GGCC | 3 cut(s) | 64, 82, 126 |
| BalI | TGGCCA | 1 cut(s) | 128 |
| BauI | CACGAG | 1 cut(s) | 50 |
| BcoDI | GTCTC | 1 cut(s) | 26 |
| BfaI | CTAG | 3 cut(s) | 18, 62, 383 |
| BmsI | GCATC | 1 cut(s) | 325 |
| BpuEI | CTTGAG | 1 cut(s) | 186 |
| BsaAI | YACGTR | 1 cut(s) | 216 |
| BseGI | GGATG | 1 cut(s) | 340 |
| BseMII | CTCAG | 1 cut(s) | 378 |
| BshFI | GGCC | 3 cut(s) | 66, 84, 128 |
| BsiSI | CCGG | 1 cut(s) | 85 |
| BsmAI | GTCTC | 1 cut(s) | 26 |
| BsnI | GGCC | 3 cut(s) | 66, 84, 128 |
| BspANI | GGCC | 3 cut(s) | 66, 84, 128 |
| BspCNI | CTCAG | 1 cut(s) | 379 |
| BssSI | CACGAG | 1 cut(s) | 50 |
| Bst2BI | CACGAG | 1 cut(s) | 50 |
| BstBAI | YACGTR | 1 cut(s) | 216 |
| BstDEI | CTNAG | 3 cut(s) | 25, 301, 387 |
| BstF5I | GGATG | 1 cut(s) | 340 |
| BstMAI | GTCTC | 1 cut(s) | 26 |
| BstSNI | TACGTA | 1 cut(s) | 216 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 136 |
| BsuRI | GGCC | 3 cut(s) | 66, 84, 128 |
| BtgZI | GCGATG | 1 cut(s) | 236 |
| BtsCI | GGATG | 1 cut(s) | 340 |
| Csp6I | GTAC | 1 cut(s) | 297 |
| CviJI | RGCY | 8 cut(s) | 66, 84, 128, 170, 200, 206, 249, 386 |
| CviKI_1 | RGCY | 8 cut(s) | 66, 84, 128, 170, 200, 206, 249, 386 |
| CviQI | GTAC | 1 cut(s) | 297 |
| DdeI | CTNAG | 3 cut(s) | 25, 301, 387 |
| EaeI | YGGCCR | 1 cut(s) | 126 |
| Eco105I | TACGTA | 1 cut(s) | 216 |
| Eco147I | AGGCCT | 1 cut(s) | 66 |
| FaiI | YATR | 5 cut(s) | 78, 111, 113, 219, 343 |
| FokI | GGATG | 1 cut(s) | 347 |
| FspBI | CTAG | 3 cut(s) | 18, 62, 383 |
| HaeIII | GGCC | 3 cut(s) | 66, 84, 128 |
| HapII | CCGG | 1 cut(s) | 85 |
| HindIII | AAGCTT | 1 cut(s) | 204 |
| HinfI | GANTC | 3 cut(s) | 44, 316, 379 |
| HpaII | CCGG | 1 cut(s) | 85 |
| Hpy188I | TCNGA | 2 cut(s) | 72, 378 |
| Hpy188III | TCNNGA | 1 cut(s) | 184 |
| HpyAV | CCTTC | 2 cut(s) | 77, 353 |
| HpyCH4IV | ACGT | 1 cut(s) | 215 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 278, 345 |
| HpyF3I | CTNAG | 3 cut(s) | 25, 301, 387 |
| HpySE526I | ACGT | 1 cut(s) | 215 |
| LmnI | GCTCC | 1 cut(s) | 167 |
| LpnPI | CCDG | 3 cut(s) | 98, 156, 271 |
| LweI | GCATC | 1 cut(s) | 325 |
| MaeI | CTAG | 3 cut(s) | 18, 62, 383 |
| MaeII | ACGT | 1 cut(s) | 215 |
| MboII | GAAGA | 2 cut(s) | 325, 368 |
| MlsI | TGGCCA | 1 cut(s) | 128 |
| MluCI | AATT | 3 cut(s) | 73, 142, 393 |
| MluNI | TGGCCA | 1 cut(s) | 128 |
| MlyI | GAGTC | 1 cut(s) | 388 |
| MmeI | TCCRAC | 1 cut(s) | 117 |
| MnlI | CCTC | 2 cut(s) | 28, 250 |
| Mox20I | TGGCCA | 1 cut(s) | 128 |
| MscI | TGGCCA | 1 cut(s) | 128 |
| MseI | TTAA | 2 cut(s) | 161, 392 |
| Msp20I | TGGCCA | 1 cut(s) | 128 |
| MspI | CCGG | 1 cut(s) | 85 |
| PceI | AGGCCT | 1 cut(s) | 66 |
| PfeI | GAWTC | 2 cut(s) | 44, 316 |
| PleI | GAGTC | 1 cut(s) | 387 |
| PpsI | GAGTC | 1 cut(s) | 387 |
| Ppu21I | YACGTR | 1 cut(s) | 216 |
| RsaI | GTAC | 1 cut(s) | 298 |
| RsaNI | GTAC | 1 cut(s) | 297 |
| SaqAI | TTAA | 2 cut(s) | 161, 392 |
| SchI | GAGTC | 1 cut(s) | 388 |
| SetI | ASST | 9 cut(s) | 39, 172, 208, 214, 218, 284, 302, 364, 388 |
| SfaNI | GCATC | 1 cut(s) | 325 |
| SmlI | CTYRAG | 1 cut(s) | 201 |
| SmoI | CTYRAG | 1 cut(s) | 201 |
| SnaBI | TACGTA | 1 cut(s) | 216 |
| Sse9I | AATT | 3 cut(s) | 73, 142, 393 |
| SseBI | AGGCCT | 1 cut(s) | 66 |
| SspMI | CTAG | 3 cut(s) | 18, 62, 383 |
| StuI | AGGCCT | 1 cut(s) | 66 |
| TaiI | ACGT | 1 cut(s) | 218 |
| TasI | AATT | 3 cut(s) | 73, 142, 393 |
| TfiI | GAWTC | 2 cut(s) | 44, 316 |
| Tru1I | TTAA | 2 cut(s) | 161, 392 |
| Tru9I | TTAA | 2 cut(s) | 161, 392 |
| TspDTI | ATGAA | 1 cut(s) | 308 |
| TspGWI | ACGGA | 1 cut(s) | 325 |
| XspI | CTAG | 3 cut(s) | 18, 62, 383 |