Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 27 |
| AccB1I | GGYRCC | 1 cut(s) | 799 |
| AciI | CCGC | 1 cut(s) | 622 |
| AclWI | GGATC | 3 cut(s) | 256, 269, 545 |
| AcoI | YGGCCR | 2 cut(s) | 421, 750 |
| AcsI | RAATTY | 1 cut(s) | 591 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 165 |
| AgsI | TTSAA | 6 cut(s) | 10, 100, 212, 716, 817, 833 |
| AluBI | AGCT | 7 cut(s) | 104, 203, 395, 503, 565, 853, 871 |
| AluI | AGCT | 7 cut(s) | 104, 203, 395, 503, 565, 853, 871 |
| Alw26I | GTCTC | 2 cut(s) | 141, 335 |
| AlwI | GGATC | 3 cut(s) | 256, 269, 545 |
| Ama87I | CYCGRG | 1 cut(s) | 504 |
| AoxI | GGCC | 4 cut(s) | 188, 421, 585, 750 |
| ApeKI | GCWGC | 2 cut(s) | 395, 571 |
| ApoI | RAATTY | 1 cut(s) | 591 |
| AseI | ATTAAT | 1 cut(s) | 333 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 354 |
| AsuC2I | CCSGG | 1 cut(s) | 266 |
| AsuHPI | GGTGA | 2 cut(s) | 144, 236 |
| AvaI | CYCGRG | 1 cut(s) | 504 |
| BalI | TGGCCA | 1 cut(s) | 752 |
| BamHI | GGATCC | 1 cut(s) | 261 |
| BanI | GGYRCC | 1 cut(s) | 799 |
| BanII | GRGCYC | 1 cut(s) | 841 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 476, 508 |
| BbsI | GAAGAC | 1 cut(s) | 723 |
| BbvI | GCAGC | 2 cut(s) | 382, 583 |
| BccI | CCATC | 4 cut(s) | 163, 221, 291, 871 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 414, 448 |
| BciVI | GTATCC | 2 cut(s) | 422, 753 |
| BcnI | CCSGG | 1 cut(s) | 266 |
| BcoDI | GTCTC | 2 cut(s) | 141, 335 |
| BfaI | CTAG | 4 cut(s) | 105, 384, 678, 863 |
| BfmI | CTRYAG | 1 cut(s) | 303 |
| BfuI | GTATCC | 2 cut(s) | 422, 753 |
| BglII | AGATCT | 1 cut(s) | 402 |
| BisI | GCNGC | 2 cut(s) | 396, 572 |
| BlsI | GCNGC | 2 cut(s) | 397, 573 |
| Bme1390I | CCNGG | 1 cut(s) | 266 |
| BmeT110I | CYCGRG | 1 cut(s) | 504 |
| BmiI | GGNNCC | 2 cut(s) | 263, 801 |
| BmrFI | CCNGG | 1 cut(s) | 266 |
| BmsI | GCATC | 2 cut(s) | 280, 816 |
| BpiI | GAAGAC | 1 cut(s) | 723 |
| BpuEI | CTTGAG | 1 cut(s) | 833 |
| BpuMI | CCSGG | 1 cut(s) | 266 |
| BsaJI | CCNNGG | 1 cut(s) | 363 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 165 |
| Bse1I | ACTGG | 4 cut(s) | 66, 191, 500, 623 |
| Bse3DI | GCAATG | 1 cut(s) | 42 |
| BseDI | CCNNGG | 1 cut(s) | 363 |
| BseGI | GGATG | 3 cut(s) | 155, 274, 831 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseMI | GCAATG | 1 cut(s) | 42 |
| BseMII | CTCAG | 1 cut(s) | 193 |
| BseNI | ACTGG | 4 cut(s) | 66, 191, 500, 623 |
| BseXI | GCAGC | 2 cut(s) | 382, 583 |
| BshFI | GGCC | 4 cut(s) | 190, 423, 587, 752 |
| BshNI | GGYRCC | 1 cut(s) | 799 |
| BsiHKCI | CYCGRG | 1 cut(s) | 504 |
| BsiSI | CCGG | 1 cut(s) | 266 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BsmAI | GTCTC | 2 cut(s) | 141, 335 |
| BsnI | GGCC | 4 cut(s) | 190, 423, 587, 752 |
| BsoBI | CYCGRG | 1 cut(s) | 504 |
| Bsp1286I | GDGCHC | 1 cut(s) | 841 |
| Bsp143I | GATC | 4 cut(s) | 261, 325, 402, 550 |
| BspACI | CCGC | 1 cut(s) | 622 |
| BspANI | GGCC | 4 cut(s) | 190, 423, 587, 752 |
| BspCNI | CTCAG | 1 cut(s) | 192 |
| BspLI | GGNNCC | 2 cut(s) | 263, 801 |
| BspPI | GGATC | 3 cut(s) | 256, 269, 545 |
| BspT107I | GGYRCC | 1 cut(s) | 799 |
| BsrDI | GCAATG | 1 cut(s) | 42 |
| BsrI | ACTGG | 4 cut(s) | 66, 191, 500, 623 |
| BssECI | CCNNGG | 1 cut(s) | 363 |
| BssMI | GATC | 4 cut(s) | 261, 325, 402, 550 |
| BstC8I | GCNNGC | 3 cut(s) | 188, 624, 695 |
| BstDEI | CTNAG | 2 cut(s) | 179, 640 |
| BstF5I | GGATG | 3 cut(s) | 155, 274, 831 |
| BstKTI | GATC | 4 cut(s) | 264, 328, 405, 553 |
| BstMAI | GTCTC | 2 cut(s) | 141, 335 |
| BstMBI | GATC | 4 cut(s) | 261, 325, 402, 550 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 41, 55, 571 |
| BstSCI | CCNGG | 1 cut(s) | 264 |
| BstSFI | CTRYAG | 1 cut(s) | 303 |
| BstV1I | GCAGC | 2 cut(s) | 382, 583 |
| BstV2I | GAAGAC | 1 cut(s) | 723 |
| BstX2I | RGATCY | 3 cut(s) | 261, 402, 550 |
| BstYI | RGATCY | 3 cut(s) | 261, 402, 550 |
| BsuI | GTATCC | 2 cut(s) | 422, 753 |
| BsuRI | GGCC | 4 cut(s) | 190, 423, 587, 752 |
| BtsCI | GGATG | 3 cut(s) | 155, 274, 831 |
| BtsIMutI | CAGTG | 1 cut(s) | 187 |
| Cac8I | GCNNGC | 3 cut(s) | 188, 624, 695 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviAII | CATG | 2 cut(s) | 165, 251 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DdeI | CTNAG | 2 cut(s) | 179, 640 |
| DpnI | GATC | 4 cut(s) | 263, 327, 404, 552 |
| DpnII | GATC | 4 cut(s) | 261, 325, 402, 550 |
| DraI | TTTAAA | 1 cut(s) | 559 |
| EaeI | YGGCCR | 2 cut(s) | 421, 750 |
| Eco24I | GRGCYC | 1 cut(s) | 841 |
| Eco88I | CYCGRG | 1 cut(s) | 504 |
| EcoT38I | GRGCYC | 1 cut(s) | 841 |
| FaeI | CATG | 2 cut(s) | 168, 254 |
| FatI | CATG | 2 cut(s) | 164, 250 |
| FauI | CCCGC | 1 cut(s) | 615 |
| FauNDI | CATATG | 1 cut(s) | 449 |
| Fnu4HI | GCNGC | 2 cut(s) | 396, 572 |
| FokI | GGATG | 3 cut(s) | 142, 261, 838 |
| FriOI | GRGCYC | 1 cut(s) | 841 |
| Fsp4HI | GCNGC | 2 cut(s) | 396, 572 |
| FspBI | CTAG | 4 cut(s) | 105, 384, 678, 863 |
| GluI | GCNGC | 2 cut(s) | 396, 572 |
| HaeIII | GGCC | 4 cut(s) | 190, 423, 587, 752 |
| HapII | CCGG | 1 cut(s) | 266 |
| Hin1II | CATG | 2 cut(s) | 168, 254 |
| HinfI | GANTC | 4 cut(s) | 6, 149, 355, 454 |
| HpaII | CCGG | 1 cut(s) | 266 |
| HphI | GGTGA | 2 cut(s) | 144, 236 |
| Hpy188I | TCNGA | 2 cut(s) | 439, 887 |
| Hpy188III | TCNNGA | 5 cut(s) | 10, 338, 458, 506, 597 |
| Hpy99I | CGWCG | 1 cut(s) | 429 |
| HpyAV | CCTTC | 1 cut(s) | 577 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 271 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 41, 55, 571 |
| HpyF3I | CTNAG | 2 cut(s) | 179, 640 |
| Hsp92II | CATG | 2 cut(s) | 168, 254 |
| Kzo9I | GATC | 4 cut(s) | 261, 325, 402, 550 |
| Lsp1109I | GCAGC | 2 cut(s) | 382, 583 |
| LweI | GCATC | 2 cut(s) | 280, 816 |
| MaeI | CTAG | 4 cut(s) | 105, 384, 678, 863 |
| MaeIII | GTNAC | 4 cut(s) | 64, 386, 614, 629 |
| MalI | GATC | 4 cut(s) | 263, 327, 404, 552 |
| MboI | GATC | 4 cut(s) | 261, 325, 402, 550 |
| MboII | GAAGA | 2 cut(s) | 412, 728 |
| MfeI | CAATTG | 1 cut(s) | 118 |
| MflI | RGATCY | 3 cut(s) | 261, 402, 550 |
| MhlI | GDGCHC | 1 cut(s) | 841 |
| MlsI | TGGCCA | 1 cut(s) | 752 |
| MluCI | AATT | 4 cut(s) | 118, 219, 591, 781 |
| MluNI | TGGCCA | 1 cut(s) | 752 |
| MlyI | GAGTC | 2 cut(s) | 143, 463 |
| MnlI | CCTC | 4 cut(s) | 127, 373, 756, 783 |
| Mox20I | TGGCCA | 1 cut(s) | 752 |
| MroXI | GAANNNNTTC | 1 cut(s) | 354 |
| MscI | TGGCCA | 1 cut(s) | 752 |
| MseI | TTAA | 3 cut(s) | 333, 558, 780 |
| Msp20I | TGGCCA | 1 cut(s) | 752 |
| MspI | CCGG | 1 cut(s) | 266 |
| MspR9I | CCNGG | 1 cut(s) | 266 |
| MunI | CAATTG | 1 cut(s) | 118 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 41, 55, 571 |
| NciI | CCSGG | 1 cut(s) | 266 |
| NdeI | CATATG | 1 cut(s) | 449 |
| NdeII | GATC | 4 cut(s) | 261, 325, 402, 550 |
| NlaIII | CATG | 2 cut(s) | 168, 254 |
| NlaIV | GGNNCC | 2 cut(s) | 263, 801 |
| NmuCI | GTSAC | 1 cut(s) | 386 |
| PdmI | GAANNNNTTC | 1 cut(s) | 354 |
| PfeI | GAWTC | 2 cut(s) | 6, 355 |
| PkrI | GCNGC | 2 cut(s) | 397, 573 |
| PleI | GAGTC | 2 cut(s) | 143, 462 |
| PpsI | GAGTC | 2 cut(s) | 143, 462 |
| PshBI | ATTAAT | 1 cut(s) | 333 |
| PsiI | TTATAA | 1 cut(s) | 27 |
| PspN4I | GGNNCC | 2 cut(s) | 263, 801 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 501, 533 |
| PsuI | RGATCY | 3 cut(s) | 261, 402, 550 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| SaqAI | TTAA | 3 cut(s) | 333, 558, 780 |
| SatI | GCNGC | 2 cut(s) | 396, 572 |
| Sau3AI | GATC | 4 cut(s) | 261, 325, 402, 550 |
| SchI | GAGTC | 2 cut(s) | 143, 463 |
| ScrFI | CCNGG | 1 cut(s) | 266 |
| SduI | GDGCHC | 1 cut(s) | 841 |
| SfaNI | GCATC | 2 cut(s) | 280, 816 |
| SfcI | CTRYAG | 1 cut(s) | 303 |
| SmlI | CTYRAG | 1 cut(s) | 848 |
| SmoI | CTYRAG | 1 cut(s) | 848 |
| Sse9I | AATT | 4 cut(s) | 118, 219, 591, 781 |
| SsiI | CCGC | 1 cut(s) | 622 |
| SspMI | CTAG | 4 cut(s) | 105, 384, 678, 863 |
| StyD4I | CCNGG | 1 cut(s) | 264 |
| TaqI | TCGA | 1 cut(s) | 855 |
| TasI | AATT | 4 cut(s) | 118, 219, 591, 781 |
| TfiI | GAWTC | 2 cut(s) | 6, 355 |
| Tru1I | TTAA | 3 cut(s) | 333, 558, 780 |
| Tru9I | TTAA | 3 cut(s) | 333, 558, 780 |
| TscAI | CASTG | 1 cut(s) | 187 |
| TseFI | GTSAC | 1 cut(s) | 386 |
| TseI | GCWGC | 2 cut(s) | 395, 571 |
| Tsp45I | GTSAC | 1 cut(s) | 386 |
| TspDTI | ATGAA | 1 cut(s) | 153 |
| TspGWI | ACGGA | 2 cut(s) | 226, 543 |
| TspRI | CASTG | 1 cut(s) | 187 |
| VspI | ATTAAT | 1 cut(s) | 333 |
| XapI | RAATTY | 1 cut(s) | 591 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 162 |
| XmnI | GAANNNNTTC | 1 cut(s) | 354 |
| XspI | CTAG | 4 cut(s) | 105, 384, 678, 863 |