Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 330 |
| AgsI | TTSAA | 4 cut(s) | 83, 95, 134, 238 |
| AluBI | AGCT | 2 cut(s) | 113, 332 |
| AluI | AGCT | 2 cut(s) | 113, 332 |
| Alw21I | GWGCWC | 1 cut(s) | 144 |
| Alw26I | GTCTC | 1 cut(s) | 116 |
| Alw44I | GTGCAC | 1 cut(s) | 140 |
| ApaLI | GTGCAC | 1 cut(s) | 140 |
| ApeKI | GCWGC | 1 cut(s) | 287 |
| AsuHPI | GGTGA | 1 cut(s) | 33 |
| BaeGI | GKGCMC | 1 cut(s) | 144 |
| Bbv12I | GWGCWC | 1 cut(s) | 144 |
| BbvI | GCAGC | 1 cut(s) | 274 |
| BccI | CCATC | 1 cut(s) | 158 |
| BceAI | ACGGC | 1 cut(s) | 366 |
| BcoDI | GTCTC | 1 cut(s) | 116 |
| BfaI | CTAG | 3 cut(s) | 60, 159, 297 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| BmsI | GCATC | 1 cut(s) | 211 |
| BpmI | CTGGAG | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 1 cut(s) | 183 |
| Bse1I | ACTGG | 1 cut(s) | 34 |
| BseDI | CCNNGG | 1 cut(s) | 183 |
| BseGI | GGATG | 2 cut(s) | 169, 226 |
| BseMII | CTCAG | 1 cut(s) | 354 |
| BseNI | ACTGG | 1 cut(s) | 34 |
| BseSI | GKGCMC | 1 cut(s) | 144 |
| BseXI | GCAGC | 1 cut(s) | 274 |
| BsiHKAI | GWGCWC | 1 cut(s) | 144 |
| BsmAI | GTCTC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 1 cut(s) | 355 |
| BsrI | ACTGG | 1 cut(s) | 34 |
| BssECI | CCNNGG | 1 cut(s) | 183 |
| BssT1I | CCWWGG | 1 cut(s) | 183 |
| Bst4CI | ACNGT | 2 cut(s) | 146, 271 |
| BstDEI | CTNAG | 1 cut(s) | 363 |
| BstF5I | GGATG | 2 cut(s) | 169, 226 |
| BstMAI | GTCTC | 1 cut(s) | 116 |
| BstNSI | RCATGY | 1 cut(s) | 294 |
| BstSLI | GKGCMC | 1 cut(s) | 144 |
| BstV1I | GCAGC | 1 cut(s) | 274 |
| BtsCI | GGATG | 2 cut(s) | 169, 226 |
| CviAII | CATG | 3 cut(s) | 98, 283, 291 |
| CviJI | RGCY | 6 cut(s) | 59, 77, 113, 287, 332, 353 |
| CviKI_1 | RGCY | 6 cut(s) | 59, 77, 113, 287, 332, 353 |
| DdeI | CTNAG | 1 cut(s) | 363 |
| Eco130I | CCWWGG | 1 cut(s) | 183 |
| Eco57I | CTGAAG | 1 cut(s) | 330 |
| EcoT14I | CCWWGG | 1 cut(s) | 183 |
| ErhI | CCWWGG | 1 cut(s) | 183 |
| FaeI | CATG | 3 cut(s) | 101, 286, 294 |
| FaiI | YATR | 5 cut(s) | 99, 198, 284, 292, 377 |
| FatI | CATG | 3 cut(s) | 97, 282, 290 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| FokI | GGATG | 2 cut(s) | 176, 233 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| FspBI | CTAG | 3 cut(s) | 60, 159, 297 |
| GluI | GCNGC | 1 cut(s) | 288 |
| GsuI | CTGGAG | 1 cut(s) | 30 |
| Hin1II | CATG | 3 cut(s) | 101, 286, 294 |
| HincII | GTYRAC | 1 cut(s) | 27 |
| HindII | GTYRAC | 1 cut(s) | 27 |
| HphI | GGTGA | 1 cut(s) | 33 |
| Hpy166II | GTNNAC | 2 cut(s) | 27, 142 |
| Hpy188III | TCNNGA | 1 cut(s) | 218 |
| Hpy8I | GTNNAC | 2 cut(s) | 27, 142 |
| HpyAV | CCTTC | 2 cut(s) | 232, 345 |
| HpyCH4III | ACNGT | 2 cut(s) | 146, 271 |
| HpyCH4IV | ACGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 3 cut(s) | 142, 263, 290 |
| HpyF3I | CTNAG | 1 cut(s) | 363 |
| HpySE526I | ACGT | 1 cut(s) | 169 |
| Hsp92II | CATG | 3 cut(s) | 101, 286, 294 |
| LmnI | GCTCC | 1 cut(s) | 337 |
| LpnPI | CCDG | 4 cut(s) | 15, 57, 123, 203 |
| Lsp1109I | GCAGC | 1 cut(s) | 274 |
| LweI | GCATC | 1 cut(s) | 211 |
| MaeI | CTAG | 3 cut(s) | 60, 159, 297 |
| MaeII | ACGT | 1 cut(s) | 169 |
| MaeIII | GTNAC | 1 cut(s) | 170 |
| MboII | GAAGA | 3 cut(s) | 98, 323, 335 |
| MhlI | GDGCHC | 1 cut(s) | 144 |
| MluCI | AATT | 4 cut(s) | 83, 135, 148, 232 |
| MnlI | CCTC | 4 cut(s) | 5, 49, 187, 249 |
| NlaIII | CATG | 3 cut(s) | 101, 286, 294 |
| NspI | RCATGY | 1 cut(s) | 294 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| SatI | GCNGC | 1 cut(s) | 288 |
| SduI | GDGCHC | 1 cut(s) | 144 |
| SetI | ASST | 7 cut(s) | 115, 172, 179, 185, 243, 260, 334 |
| SfaNI | GCATC | 1 cut(s) | 211 |
| Sse9I | AATT | 4 cut(s) | 83, 135, 148, 232 |
| SspMI | CTAG | 3 cut(s) | 60, 159, 297 |
| StyI | CCWWGG | 1 cut(s) | 183 |
| TaaI | ACNGT | 2 cut(s) | 146, 271 |
| TaiI | ACGT | 1 cut(s) | 172 |
| TasI | AATT | 4 cut(s) | 83, 135, 148, 232 |
| TseI | GCWGC | 1 cut(s) | 287 |
| VneI | GTGCAC | 1 cut(s) | 140 |
| XceI | RCATGY | 1 cut(s) | 294 |
| XspI | CTAG | 3 cut(s) | 60, 159, 297 |