Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 128 - 231 | 1.3e-16 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 746 |
| Acc36I | ACCTGC | 1 cut(s) | 502 |
| AciI | CCGC | 1 cut(s) | 343 |
| AclWI | GGATC | 1 cut(s) | 702 |
| AcsI | RAATTY | 2 cut(s) | 182, 751 |
| AfaI | GTAC | 1 cut(s) | 516 |
| AflIII | ACRYGT | 1 cut(s) | 364 |
| AgsI | TTSAA | 7 cut(s) | 179, 289, 318, 524, 548, 579, 767 |
| AjnI | CCWGG | 2 cut(s) | 322, 719 |
| AluBI | AGCT | 9 cut(s) | 73, 282, 301, 359, 413, 460, 476, 674, 709 |
| AluI | AGCT | 9 cut(s) | 73, 282, 301, 359, 413, 460, 476, 674, 709 |
| AlwI | GGATC | 1 cut(s) | 702 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 443 |
| Ama87I | CYCGRG | 1 cut(s) | 737 |
| ApeKI | GCWGC | 7 cut(s) | 169, 224, 410, 437, 476, 499, 560 |
| ApoI | RAATTY | 2 cut(s) | 182, 751 |
| AsuHPI | GGTGA | 2 cut(s) | 346, 398 |
| AvaI | CYCGRG | 1 cut(s) | 737 |
| BanII | GRGCYC | 1 cut(s) | 356 |
| BbvI | GCAGC | 7 cut(s) | 181, 211, 422, 449, 463, 486, 547 |
| BccI | CCATC | 2 cut(s) | 649, 685 |
| BceAI | ACGGC | 1 cut(s) | 212 |
| BciT130I | CCWGG | 2 cut(s) | 324, 721 |
| BclI | TGATCA | 1 cut(s) | 388 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BfmI | CTRYAG | 1 cut(s) | 477 |
| BfuAI | ACCTGC | 1 cut(s) | 502 |
| BisI | GCNGC | 7 cut(s) | 170, 225, 411, 438, 477, 500, 561 |
| BlsI | GCNGC | 7 cut(s) | 171, 226, 412, 439, 478, 501, 562 |
| Bme1390I | CCNGG | 2 cut(s) | 324, 721 |
| BmeT110I | CYCGRG | 1 cut(s) | 737 |
| BmrFI | CCNGG | 2 cut(s) | 324, 721 |
| BmsI | GCATC | 2 cut(s) | 511, 562 |
| BsaJI | CCNNGG | 1 cut(s) | 322 |
| BsaWI | WCCGGW | 1 cut(s) | 106 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 318, 348 |
| BseBI | CCWGG | 2 cut(s) | 324, 721 |
| BseDI | CCNNGG | 1 cut(s) | 322 |
| BseGI | GGATG | 2 cut(s) | 144, 604 |
| BseMII | CTCAG | 2 cut(s) | 696, 701 |
| BseXI | GCAGC | 7 cut(s) | 181, 211, 422, 449, 463, 486, 547 |
| BseYI | CCCAGC | 1 cut(s) | 355 |
| BsiHKCI | CYCGRG | 1 cut(s) | 737 |
| BsiSI | CCGG | 1 cut(s) | 107 |
| BslFI | GGGAC | 1 cut(s) | 413 |
| BsmFI | GGGAC | 1 cut(s) | 413 |
| BsoBI | CYCGRG | 1 cut(s) | 737 |
| Bsp1286I | GDGCHC | 1 cut(s) | 356 |
| Bsp143I | GATC | 3 cut(s) | 388, 462, 694 |
| BspACI | CCGC | 1 cut(s) | 343 |
| BspCNI | CTCAG | 2 cut(s) | 697, 700 |
| BspHI | TCATGA | 1 cut(s) | 505 |
| BspMAI | CTGCAG | 1 cut(s) | 481 |
| BspMI | ACCTGC | 1 cut(s) | 502 |
| BspPI | GGATC | 1 cut(s) | 702 |
| BssECI | CCNNGG | 1 cut(s) | 322 |
| BssMI | GATC | 3 cut(s) | 388, 462, 694 |
| Bst2UI | CCWGG | 2 cut(s) | 324, 721 |
| Bst4CI | ACNGT | 1 cut(s) | 519 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 443 |
| BstC8I | GCNNGC | 3 cut(s) | 255, 309, 474 |
| BstDEI | CTNAG | 2 cut(s) | 687, 705 |
| BstF5I | GGATG | 2 cut(s) | 144, 604 |
| BstKTI | GATC | 3 cut(s) | 391, 465, 697 |
| BstMBI | GATC | 3 cut(s) | 388, 462, 694 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 263, 443, 473, 508 |
| BstNI | CCWGG | 2 cut(s) | 324, 721 |
| BstNSI | RCATGY | 3 cut(s) | 44, 311, 368 |
| BstSCI | CCNGG | 2 cut(s) | 322, 719 |
| BstSFI | CTRYAG | 1 cut(s) | 477 |
| BstV1I | GCAGC | 7 cut(s) | 181, 211, 422, 449, 463, 486, 547 |
| BstX2I | RGATCY | 1 cut(s) | 694 |
| BstYI | RGATCY | 1 cut(s) | 694 |
| BtgZI | GCGATG | 1 cut(s) | 741 |
| BtsCI | GGATG | 2 cut(s) | 144, 604 |
| BtsI | GCAGTG | 1 cut(s) | 555 |
| BtsIMutI | CAGTG | 1 cut(s) | 555 |
| BveI | ACCTGC | 1 cut(s) | 502 |
| Cac8I | GCNNGC | 3 cut(s) | 255, 309, 474 |
| CaiI | CAGNNNCTG | 1 cut(s) | 443 |
| CciI | TCATGA | 1 cut(s) | 505 |
| Csp6I | GTAC | 1 cut(s) | 515 |
| CviAII | CATG | 6 cut(s) | 41, 187, 308, 365, 506, 647 |
| CviQI | GTAC | 1 cut(s) | 515 |
| DdeI | CTNAG | 2 cut(s) | 687, 705 |
| DpnI | GATC | 3 cut(s) | 390, 464, 696 |
| DpnII | GATC | 3 cut(s) | 388, 462, 694 |
| Eco24I | GRGCYC | 1 cut(s) | 356 |
| Eco88I | CYCGRG | 1 cut(s) | 737 |
| EcoRI | GAATTC | 1 cut(s) | 751 |
| EcoRII | CCWGG | 2 cut(s) | 322, 719 |
| EcoT38I | GRGCYC | 1 cut(s) | 356 |
| FaeI | CATG | 6 cut(s) | 44, 190, 311, 368, 509, 650 |
| FaqI | GGGAC | 1 cut(s) | 413 |
| FatI | CATG | 6 cut(s) | 40, 186, 307, 364, 505, 646 |
| FbaI | TGATCA | 1 cut(s) | 388 |
| Fnu4HI | GCNGC | 7 cut(s) | 170, 225, 411, 438, 477, 500, 561 |
| FokI | GGATG | 2 cut(s) | 151, 611 |
| FriOI | GRGCYC | 1 cut(s) | 356 |
| Fsp4HI | GCNGC | 7 cut(s) | 170, 225, 411, 438, 477, 500, 561 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GluI | GCNGC | 7 cut(s) | 170, 225, 411, 438, 477, 500, 561 |
| GsaI | CCCAGC | 1 cut(s) | 359 |
| HapII | CCGG | 1 cut(s) | 107 |
| Hin1II | CATG | 6 cut(s) | 44, 190, 311, 368, 509, 650 |
| HinfI | GANTC | 1 cut(s) | 337 |
| HpaII | CCGG | 1 cut(s) | 107 |
| HphI | GGTGA | 2 cut(s) | 346, 398 |
| Hpy166II | GTNNAC | 2 cut(s) | 348, 536 |
| Hpy188I | TCNGA | 2 cut(s) | 690, 706 |
| Hpy188III | TCNNGA | 2 cut(s) | 506, 737 |
| Hpy8I | GTNNAC | 2 cut(s) | 348, 536 |
| HpyAV | CCTTC | 1 cut(s) | 325 |
| HpyCH4III | ACNGT | 1 cut(s) | 519 |
| HpyCH4V | TGCA | 7 cut(s) | 94, 169, 307, 437, 472, 479, 502 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 263, 443, 473, 508 |
| HpyF3I | CTNAG | 2 cut(s) | 687, 705 |
| Hsp92II | CATG | 6 cut(s) | 44, 190, 311, 368, 509, 650 |
| Ksp22I | TGATCA | 1 cut(s) | 388 |
| Kzo9I | GATC | 3 cut(s) | 388, 462, 694 |
| LmnI | GCTCC | 3 cut(s) | 30, 70, 739 |
| Lsp1109I | GCAGC | 7 cut(s) | 181, 211, 422, 449, 463, 486, 547 |
| LweI | GCATC | 2 cut(s) | 511, 562 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MaeIII | GTNAC | 2 cut(s) | 109, 649 |
| MalI | GATC | 3 cut(s) | 390, 464, 696 |
| MboI | GATC | 3 cut(s) | 388, 462, 694 |
| MboII | GAAGA | 5 cut(s) | 248, 306, 433, 581, 689 |
| MfeI | CAATTG | 3 cut(s) | 154, 267, 579 |
| MflI | RGATCY | 1 cut(s) | 694 |
| MhlI | GDGCHC | 1 cut(s) | 356 |
| MluCI | AATT | 7 cut(s) | 154, 182, 267, 579, 622, 751, 762 |
| MmeI | TCCRAC | 1 cut(s) | 123 |
| MnlI | CCTC | 3 cut(s) | 76, 451, 595 |
| MseI | TTAA | 2 cut(s) | 129, 371 |
| MspA1I | CMGCKG | 2 cut(s) | 343, 359 |
| MspI | CCGG | 1 cut(s) | 107 |
| MspR9I | CCNGG | 2 cut(s) | 324, 721 |
| MunI | CAATTG | 3 cut(s) | 154, 267, 579 |
| MvaI | CCWGG | 2 cut(s) | 324, 721 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 263, 443, 473, 508 |
| NdeII | GATC | 3 cut(s) | 388, 462, 694 |
| NlaIII | CATG | 6 cut(s) | 44, 190, 311, 368, 509, 650 |
| NspI | RCATGY | 3 cut(s) | 44, 311, 368 |
| PaeI | GCATGC | 1 cut(s) | 311 |
| PagI | TCATGA | 1 cut(s) | 505 |
| PciI | ACATGT | 1 cut(s) | 364 |
| PfeI | GAWTC | 1 cut(s) | 337 |
| PkrI | GCNGC | 7 cut(s) | 171, 226, 412, 439, 478, 501, 562 |
| PscI | ACATGT | 1 cut(s) | 364 |
| PsiI | TTATAA | 1 cut(s) | 746 |
| Psp6I | CCWGG | 2 cut(s) | 322, 719 |
| PspFI | CCCAGC | 1 cut(s) | 355 |
| PspGI | CCWGG | 2 cut(s) | 322, 719 |
| PstI | CTGCAG | 1 cut(s) | 481 |
| PstNI | CAGNNNCTG | 1 cut(s) | 443 |
| PsuI | RGATCY | 1 cut(s) | 694 |
| PvuII | CAGCTG | 1 cut(s) | 359 |
| RsaI | GTAC | 1 cut(s) | 516 |
| RsaNI | GTAC | 1 cut(s) | 515 |
| SaqAI | TTAA | 2 cut(s) | 129, 371 |
| SatI | GCNGC | 7 cut(s) | 170, 225, 411, 438, 477, 500, 561 |
| Sau3AI | GATC | 3 cut(s) | 388, 462, 694 |
| ScrFI | CCNGG | 2 cut(s) | 324, 721 |
| SduI | GDGCHC | 1 cut(s) | 356 |
| SfaNI | GCATC | 2 cut(s) | 511, 562 |
| SfcI | CTRYAG | 1 cut(s) | 477 |
| SphI | GCATGC | 1 cut(s) | 311 |
| Sse9I | AATT | 7 cut(s) | 154, 182, 267, 579, 622, 751, 762 |
| SsiI | CCGC | 1 cut(s) | 343 |
| SspMI | CTAG | 1 cut(s) | 66 |
| StyD4I | CCNGG | 2 cut(s) | 322, 719 |
| TaaI | ACNGT | 1 cut(s) | 519 |
| TaqI | TCGA | 1 cut(s) | 456 |
| TasI | AATT | 7 cut(s) | 154, 182, 267, 579, 622, 751, 762 |
| TfiI | GAWTC | 1 cut(s) | 337 |
| Tru1I | TTAA | 2 cut(s) | 129, 371 |
| Tru9I | TTAA | 2 cut(s) | 129, 371 |
| TscAI | CASTG | 1 cut(s) | 562 |
| TseI | GCWGC | 7 cut(s) | 169, 224, 410, 437, 476, 499, 560 |
| TspDTI | ATGAA | 5 cut(s) | 17, 175, 582, 689, 744 |
| TspGWI | ACGGA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 562 |
| XapI | RAATTY | 2 cut(s) | 182, 751 |
| XceI | RCATGY | 3 cut(s) | 44, 311, 368 |
| XspI | CTAG | 1 cut(s) | 66 |