Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 22 |
| AciI | CCGC | 2 cut(s) | 146, 217 |
| AclWI | GGATC | 2 cut(s) | 155, 168 |
| AcyI | GRCGYC | 1 cut(s) | 23 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 19, 145 |
| AgsI | TTSAA | 1 cut(s) | 188 |
| AjnI | CCWGG | 1 cut(s) | 138 |
| AlwI | GGATC | 2 cut(s) | 155, 168 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| AsuHPI | GGTGA | 2 cut(s) | 188, 223 |
| BamHI | GGATCC | 1 cut(s) | 160 |
| BanI | GGYRCC | 1 cut(s) | 22 |
| BceAI | ACGGC | 1 cut(s) | 10 |
| BciT130I | CCWGG | 1 cut(s) | 140 |
| BfoI | RGCGCY | 1 cut(s) | 26 |
| Bme1390I | CCNGG | 1 cut(s) | 140 |
| BmiI | GGNNCC | 2 cut(s) | 24, 162 |
| BmrFI | CCNGG | 1 cut(s) | 140 |
| BmsI | GCATC | 2 cut(s) | 40, 66 |
| BpuEI | CTTGAG | 1 cut(s) | 59 |
| BsaHI | GRCGYC | 1 cut(s) | 23 |
| BsaJI | CCNNGG | 1 cut(s) | 139 |
| BsaWI | WCCGGW | 1 cut(s) | 198 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 19, 145 |
| BseBI | CCWGG | 1 cut(s) | 140 |
| BseDI | CCNNGG | 1 cut(s) | 139 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 19, 145 |
| BseMII | CTCAG | 1 cut(s) | 143 |
| BseRI | GAGGAG | 1 cut(s) | 56 |
| BshNI | GGYRCC | 1 cut(s) | 22 |
| BsiSI | CCGG | 1 cut(s) | 199 |
| BslFI | GGGAC | 1 cut(s) | 134 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 19, 145 |
| BsmFI | GGGAC | 1 cut(s) | 134 |
| Bsp143I | GATC | 1 cut(s) | 160 |
| BspACI | CCGC | 2 cut(s) | 146, 217 |
| BspCNI | CTCAG | 1 cut(s) | 144 |
| BspLI | GGNNCC | 2 cut(s) | 24, 162 |
| BspPI | GGATC | 2 cut(s) | 155, 168 |
| BspT107I | GGYRCC | 1 cut(s) | 22 |
| BssECI | CCNNGG | 1 cut(s) | 139 |
| BssMI | GATC | 1 cut(s) | 160 |
| BssNI | GRCGYC | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 140 |
| BstACI | GRCGYC | 1 cut(s) | 23 |
| BstDEI | CTNAG | 1 cut(s) | 152 |
| BstH2I | RGCGCY | 1 cut(s) | 26 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstKTI | GATC | 1 cut(s) | 163 |
| BstMBI | GATC | 1 cut(s) | 160 |
| BstNI | CCWGG | 1 cut(s) | 140 |
| BstSCI | CCNGG | 1 cut(s) | 138 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BtgZI | GCGATG | 1 cut(s) | 89 |
| CfoI | GCGC | 1 cut(s) | 25 |
| DdeI | CTNAG | 1 cut(s) | 152 |
| DinI | GGCGCC | 1 cut(s) | 24 |
| DpnI | GATC | 1 cut(s) | 162 |
| DpnII | GATC | 1 cut(s) | 160 |
| EcoRII | CCWGG | 1 cut(s) | 138 |
| EgeI | GGCGCC | 1 cut(s) | 24 |
| EheI | GGCGCC | 1 cut(s) | 24 |
| FaiI | YATR | 2 cut(s) | 20, 182 |
| FaqI | GGGAC | 1 cut(s) | 134 |
| GlaI | GCGC | 1 cut(s) | 24 |
| HaeII | RGCGCY | 1 cut(s) | 26 |
| HapII | CCGG | 1 cut(s) | 199 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1I | GRCGYC | 1 cut(s) | 23 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HincII | GTYRAC | 1 cut(s) | 136 |
| HindII | GTYRAC | 1 cut(s) | 136 |
| HinfI | GANTC | 1 cut(s) | 5 |
| HpaII | CCGG | 1 cut(s) | 199 |
| HphI | GGTGA | 2 cut(s) | 188, 223 |
| Hpy166II | GTNNAC | 2 cut(s) | 136, 196 |
| Hpy188I | TCNGA | 1 cut(s) | 107 |
| Hpy188III | TCNNGA | 3 cut(s) | 38, 169, 188 |
| Hpy8I | GTNNAC | 2 cut(s) | 136, 196 |
| HpyCH4V | TGCA | 2 cut(s) | 31, 79 |
| HpyF3I | CTNAG | 1 cut(s) | 152 |
| Hsp92I | GRCGYC | 1 cut(s) | 23 |
| HspAI | GCGC | 1 cut(s) | 23 |
| KasI | GGCGCC | 1 cut(s) | 22 |
| Kzo9I | GATC | 1 cut(s) | 160 |
| LpnPI | CCDG | 5 cut(s) | 125, 152, 177, 182, 212 |
| LweI | GCATC | 2 cut(s) | 40, 66 |
| MaeIII | GTNAC | 1 cut(s) | 63 |
| MalI | GATC | 1 cut(s) | 162 |
| MboI | GATC | 1 cut(s) | 160 |
| MboII | GAAGA | 1 cut(s) | 26 |
| MflI | RGATCY | 1 cut(s) | 160 |
| Mly113I | GGCGCC | 1 cut(s) | 23 |
| MlyI | GAGTC | 1 cut(s) | 14 |
| MnlI | CCTC | 5 cut(s) | 23, 34, 102, 195, 213 |
| MseI | TTAA | 1 cut(s) | 229 |
| MspI | CCGG | 1 cut(s) | 199 |
| MspR9I | CCNGG | 1 cut(s) | 140 |
| MvaI | CCWGG | 1 cut(s) | 140 |
| NarI | GGCGCC | 1 cut(s) | 23 |
| NdeII | GATC | 1 cut(s) | 160 |
| NlaIV | GGNNCC | 2 cut(s) | 24, 162 |
| PleI | GAGTC | 1 cut(s) | 13 |
| PluTI | GGCGCC | 1 cut(s) | 26 |
| PpsI | GAGTC | 1 cut(s) | 13 |
| Psp6I | CCWGG | 1 cut(s) | 138 |
| PspGI | CCWGG | 1 cut(s) | 138 |
| PspN4I | GGNNCC | 2 cut(s) | 24, 162 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| SaqAI | TTAA | 1 cut(s) | 229 |
| Sau3AI | GATC | 1 cut(s) | 160 |
| SchI | GAGTC | 1 cut(s) | 14 |
| ScrFI | CCNGG | 1 cut(s) | 140 |
| SetI | ASST | 2 cut(s) | 94, 224 |
| SfaNI | GCATC | 2 cut(s) | 40, 66 |
| SfoI | GGCGCC | 1 cut(s) | 24 |
| SmlI | CTYRAG | 1 cut(s) | 38 |
| SmoI | CTYRAG | 1 cut(s) | 38 |
| SsiI | CCGC | 2 cut(s) | 146, 217 |
| SspDI | GGCGCC | 1 cut(s) | 22 |
| StyD4I | CCNGG | 1 cut(s) | 138 |
| TaqI | TCGA | 1 cut(s) | 15 |
| Tru1I | TTAA | 1 cut(s) | 229 |
| Tru9I | TTAA | 1 cut(s) | 229 |
| TspGWI | ACGGA | 1 cut(s) | 167 |