Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 58, 91 |
| AciI | CCGC | 2 cut(s) | 89, 170 |
| AcsI | RAATTY | 1 cut(s) | 67 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 218 |
| AflIII | ACRYGT | 1 cut(s) | 154 |
| AgsI | TTSAA | 2 cut(s) | 125, 254 |
| AoxI | GGCC | 1 cut(s) | 188 |
| ApeKI | GCWGC | 1 cut(s) | 205 |
| ApoI | RAATTY | 1 cut(s) | 67 |
| AspLEI | GCGC | 2 cut(s) | 58, 60 |
| AspS9I | GGNCC | 1 cut(s) | 38 |
| AsuHPI | GGTGA | 1 cut(s) | 184 |
| AvaII | GGWCC | 1 cut(s) | 38 |
| BbvI | GCAGC | 1 cut(s) | 217 |
| BccI | CCATC | 3 cut(s) | 43, 133, 236 |
| BisI | GCNGC | 1 cut(s) | 206 |
| BlsI | GCNGC | 1 cut(s) | 207 |
| Bme18I | GGWCC | 1 cut(s) | 38 |
| BmgT120I | GGNCC | 1 cut(s) | 38 |
| BmiI | GGNNCC | 1 cut(s) | 39 |
| BmsI | GCATC | 2 cut(s) | 86, 217 |
| BsaAI | YACGTR | 1 cut(s) | 155 |
| BsaWI | WCCGGW | 1 cut(s) | 10 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 218 |
| BseGI | GGATG | 2 cut(s) | 54, 208 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BsePI | GCGCGC | 1 cut(s) | 56 |
| BseRI | GAGGAG | 1 cut(s) | 47 |
| BseXI | GCAGC | 1 cut(s) | 217 |
| Bsh1236I | CGCG | 2 cut(s) | 58, 91 |
| BshFI | GGCC | 1 cut(s) | 190 |
| BsiSI | CCGG | 1 cut(s) | 11 |
| BslFI | GGGAC | 1 cut(s) | 70 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BsmFI | GGGAC | 1 cut(s) | 70 |
| BsnI | GGCC | 1 cut(s) | 190 |
| BspACI | CCGC | 2 cut(s) | 89, 170 |
| BspANI | GGCC | 1 cut(s) | 190 |
| BspFNI | CGCG | 2 cut(s) | 58, 91 |
| BspLI | GGNNCC | 1 cut(s) | 39 |
| BssHII | GCGCGC | 1 cut(s) | 56 |
| Bst6I | CTCTTC | 1 cut(s) | 179 |
| BstBAI | YACGTR | 1 cut(s) | 155 |
| BstC8I | GCNNGC | 1 cut(s) | 58 |
| BstDEI | CTNAG | 1 cut(s) | 198 |
| BstF5I | GGATG | 2 cut(s) | 54, 208 |
| BstFNI | CGCG | 2 cut(s) | 58, 91 |
| BstHHI | GCGC | 2 cut(s) | 58, 60 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 88 |
| BstUI | CGCG | 2 cut(s) | 58, 91 |
| BstV1I | GCAGC | 1 cut(s) | 217 |
| BsuRI | GGCC | 1 cut(s) | 190 |
| BtgZI | GCGATG | 1 cut(s) | 63 |
| BtsCI | GGATG | 2 cut(s) | 54, 208 |
| Cac8I | GCNNGC | 1 cut(s) | 58 |
| CfoI | GCGC | 2 cut(s) | 58, 60 |
| Cfr13I | GGNCC | 1 cut(s) | 38 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 250, 285 |
| CviAII | CATG | 1 cut(s) | 136 |
| CviJI | RGCY | 3 cut(s) | 7, 190, 248 |
| CviKI_1 | RGCY | 3 cut(s) | 7, 190, 248 |
| DdeI | CTNAG | 1 cut(s) | 198 |
| Eam1104I | CTCTTC | 1 cut(s) | 179 |
| EarI | CTCTTC | 1 cut(s) | 179 |
| Eco47I | GGWCC | 1 cut(s) | 38 |
| EcoO109I | RGGNCCY | 1 cut(s) | 38 |
| FaeI | CATG | 1 cut(s) | 139 |
| FaiI | YATR | 2 cut(s) | 106, 137 |
| FaqI | GGGAC | 1 cut(s) | 70 |
| FatI | CATG | 1 cut(s) | 135 |
| FauI | CCCGC | 1 cut(s) | 96 |
| Fnu4HI | GCNGC | 1 cut(s) | 206 |
| FokI | GGATG | 2 cut(s) | 61, 195 |
| Fsp4HI | GCNGC | 1 cut(s) | 206 |
| GlaI | GCGC | 2 cut(s) | 57, 59 |
| GluI | GCNGC | 1 cut(s) | 206 |
| HaeIII | GGCC | 1 cut(s) | 190 |
| HapII | CCGG | 1 cut(s) | 11 |
| HhaI | GCGC | 2 cut(s) | 58, 60 |
| Hin1II | CATG | 1 cut(s) | 139 |
| Hin6I | GCGC | 2 cut(s) | 56, 58 |
| HinP1I | GCGC | 2 cut(s) | 56, 58 |
| HincII | GTYRAC | 1 cut(s) | 259 |
| HindII | GTYRAC | 1 cut(s) | 259 |
| HpaII | CCGG | 1 cut(s) | 11 |
| HphI | GGTGA | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 259 |
| Hpy188I | TCNGA | 1 cut(s) | 48 |
| Hpy188III | TCNNGA | 1 cut(s) | 293 |
| Hpy8I | GTNNAC | 1 cut(s) | 259 |
| HpyAV | CCTTC | 2 cut(s) | 16, 204 |
| HpyCH4IV | ACGT | 1 cut(s) | 154 |
| HpyCH4V | TGCA | 1 cut(s) | 77 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 88 |
| HpyF3I | CTNAG | 1 cut(s) | 198 |
| HpySE526I | ACGT | 1 cut(s) | 154 |
| Hsp92II | CATG | 1 cut(s) | 139 |
| HspAI | GCGC | 2 cut(s) | 56, 58 |
| LpnPI | CCDG | 1 cut(s) | 24 |
| Lsp1109I | GCAGC | 1 cut(s) | 217 |
| LweI | GCATC | 2 cut(s) | 86, 217 |
| MaeII | ACGT | 1 cut(s) | 154 |
| MboII | GAAGA | 3 cut(s) | 121, 193, 196 |
| MluCI | AATT | 1 cut(s) | 67 |
| MnlI | CCTC | 7 cut(s) | 25, 28, 46, 51, 180, 212, 266 |
| MslI | CAYNNNNRTG | 1 cut(s) | 140 |
| MspI | CCGG | 1 cut(s) | 11 |
| MvnI | CGCG | 2 cut(s) | 58, 91 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 88 |
| NlaIII | CATG | 1 cut(s) | 139 |
| NlaIV | GGNNCC | 1 cut(s) | 39 |
| PauI | GCGCGC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 207 |
| Ppu21I | YACGTR | 1 cut(s) | 155 |
| PpuMI | RGGWCCY | 1 cut(s) | 38 |
| Psp5II | RGGWCCY | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 1 cut(s) | 39 |
| PspPI | GGNCC | 1 cut(s) | 38 |
| PspPPI | RGGWCCY | 1 cut(s) | 38 |
| PteI | GCGCGC | 1 cut(s) | 56 |
| RseI | CAYNNNNRTG | 1 cut(s) | 140 |
| SatI | GCNGC | 1 cut(s) | 206 |
| Sau96I | GGNCC | 1 cut(s) | 38 |
| SetI | ASST | 2 cut(s) | 157, 196 |
| SfaNI | GCATC | 2 cut(s) | 86, 217 |
| SgeI | CNNG | 8 cut(s) | 23, 69, 100, 102, 148, 167, 172, 266 |
| SinI | GGWCC | 1 cut(s) | 38 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 140 |
| Sse9I | AATT | 1 cut(s) | 67 |
| SsiI | CCGC | 2 cut(s) | 89, 170 |
| TaiI | ACGT | 1 cut(s) | 157 |
| TasI | AATT | 1 cut(s) | 67 |
| TseI | GCWGC | 1 cut(s) | 205 |
| TspDTI | ATGAA | 1 cut(s) | 146 |
| VpaK11BI | GGWCC | 1 cut(s) | 38 |
| XapI | RAATTY | 1 cut(s) | 67 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 198 |