Transcription factor IBH1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 663 |
| AccII | CGCG | 1 cut(s) | 387 |
| AciI | CCGC | 1 cut(s) | 323 |
| AclWI | GGATC | 1 cut(s) | 538 |
| AcsI | RAATTY | 1 cut(s) | 205 |
| AcuI | CTGAAG | 2 cut(s) | 318, 786 |
| AfaI | GTAC | 3 cut(s) | 229, 373, 828 |
| AfeI | AGCGCT | 1 cut(s) | 489 |
| AflIII | ACRYGT | 1 cut(s) | 385 |
| AgsI | TTSAA | 3 cut(s) | 192, 778, 865 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 335 |
| AhlI | ACTAGT | 1 cut(s) | 374 |
| AjnI | CCWGG | 2 cut(s) | 139, 602 |
| AluBI | AGCT | 4 cut(s) | 23, 530, 536, 644 |
| AluI | AGCT | 4 cut(s) | 23, 530, 536, 644 |
| Alw26I | GTCTC | 1 cut(s) | 374 |
| AlwI | GGATC | 1 cut(s) | 538 |
| Aor51HI | AGCGCT | 1 cut(s) | 489 |
| AoxI | GGCC | 1 cut(s) | 743 |
| ApeKI | GCWGC | 2 cut(s) | 58, 754 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| AspLEI | GCGC | 3 cut(s) | 350, 490, 800 |
| AspS9I | GGNCC | 2 cut(s) | 325, 572 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AvaII | GGWCC | 2 cut(s) | 325, 572 |
| BanII | GRGCYC | 1 cut(s) | 584 |
| BbvCI | CCTCAGC | 1 cut(s) | 429 |
| BbvI | GCAGC | 2 cut(s) | 45, 741 |
| BccI | CCATC | 5 cut(s) | 228, 415, 515, 664, 809 |
| BceAI | ACGGC | 1 cut(s) | 341 |
| BciT130I | CCWGG | 2 cut(s) | 141, 604 |
| BcoDI | GTCTC | 1 cut(s) | 374 |
| BcuI | ACTAGT | 1 cut(s) | 374 |
| BfaI | CTAG | 2 cut(s) | 99, 375 |
| BfoI | RGCGCY | 2 cut(s) | 491, 801 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 751 |
| BisI | GCNGC | 2 cut(s) | 59, 755 |
| BlsI | GCNGC | 2 cut(s) | 60, 756 |
| Bme1390I | CCNGG | 2 cut(s) | 141, 604 |
| Bme18I | GGWCC | 2 cut(s) | 325, 572 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 335 |
| BmgT120I | GGNCC | 2 cut(s) | 325, 572 |
| BmiI | GGNNCC | 3 cut(s) | 162, 573, 574 |
| BmrFI | CCNGG | 2 cut(s) | 141, 604 |
| BmsI | GCATC | 2 cut(s) | 310, 874 |
| Bpu10I | CCTNAGC | 1 cut(s) | 429 |
| BsaJI | CCNNGG | 2 cut(s) | 576, 787 |
| BsaWI | WCCGGW | 1 cut(s) | 124 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 152, 182 |
| Bse1I | ACTGG | 1 cut(s) | 199 |
| BseBI | CCWGG | 2 cut(s) | 141, 604 |
| BseDI | CCNNGG | 2 cut(s) | 576, 787 |
| BseGI | GGATG | 3 cut(s) | 481, 622, 820 |
| BseMII | CTCAG | 3 cut(s) | 102, 234, 420 |
| BseNI | ACTGG | 1 cut(s) | 199 |
| BseRI | GAGGAG | 2 cut(s) | 173, 540 |
| BseXI | GCAGC | 2 cut(s) | 45, 741 |
| BseYI | CCCAGC | 1 cut(s) | 566 |
| BsgI | GTGCAG | 1 cut(s) | 669 |
| Bsh1236I | CGCG | 1 cut(s) | 387 |
| BshFI | GGCC | 1 cut(s) | 745 |
| BsiSI | CCGG | 1 cut(s) | 125 |
| BslFI | GGGAC | 1 cut(s) | 585 |
| BsmAI | GTCTC | 1 cut(s) | 374 |
| BsmFI | GGGAC | 1 cut(s) | 585 |
| BsmI | GAATGC | 2 cut(s) | 180, 222 |
| BsnI | GGCC | 1 cut(s) | 745 |
| Bsp1286I | GDGCHC | 1 cut(s) | 584 |
| Bsp143I | GATC | 3 cut(s) | 101, 258, 543 |
| BspACI | CCGC | 1 cut(s) | 323 |
| BspANI | GGCC | 1 cut(s) | 745 |
| BspCNI | CTCAG | 3 cut(s) | 103, 235, 421 |
| BspFNI | CGCG | 1 cut(s) | 387 |
| BspLI | GGNNCC | 3 cut(s) | 162, 573, 574 |
| BspPI | GGATC | 1 cut(s) | 538 |
| BsrI | ACTGG | 1 cut(s) | 199 |
| BssECI | CCNNGG | 2 cut(s) | 576, 787 |
| BssMI | GATC | 3 cut(s) | 101, 258, 543 |
| BssT1I | CCWWGG | 2 cut(s) | 576, 787 |
| Bst2UI | CCWGG | 2 cut(s) | 141, 604 |
| Bst4CI | ACNGT | 2 cut(s) | 7, 96 |
| Bst6I | CTCTTC | 1 cut(s) | 557 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 58 |
| BstC8I | GCNNGC | 1 cut(s) | 63 |
| BstDEI | CTNAG | 4 cut(s) | 111, 243, 288, 429 |
| BstF5I | GGATG | 3 cut(s) | 481, 622, 820 |
| BstFNI | CGCG | 1 cut(s) | 387 |
| BstH2I | RGCGCY | 2 cut(s) | 491, 801 |
| BstHHI | GCGC | 3 cut(s) | 350, 490, 800 |
| BstKTI | GATC | 3 cut(s) | 104, 261, 546 |
| BstMAI | GTCTC | 1 cut(s) | 374 |
| BstMBI | GATC | 3 cut(s) | 101, 258, 543 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 58, 751, 760, 779, 817, 893 |
| BstNI | CCWGG | 2 cut(s) | 141, 604 |
| BstNSI | RCATGY | 2 cut(s) | 65, 86 |
| BstSCI | CCNGG | 2 cut(s) | 139, 602 |
| BstUI | CGCG | 1 cut(s) | 387 |
| BstV1I | GCAGC | 2 cut(s) | 45, 741 |
| BsuRI | GGCC | 1 cut(s) | 745 |
| BtsCI | GGATG | 3 cut(s) | 481, 622, 820 |
| BtsIMutI | CAGTG | 1 cut(s) | 810 |
| Cac8I | GCNNGC | 1 cut(s) | 63 |
| CfoI | GCGC | 3 cut(s) | 350, 490, 800 |
| Cfr13I | GGNCC | 2 cut(s) | 325, 572 |
| CpoI | CGGWCCG | 1 cut(s) | 325 |
| Csp6I | GTAC | 3 cut(s) | 228, 372, 827 |
| CspI | CGGWCCG | 1 cut(s) | 325 |
| CviAII | CATG | 5 cut(s) | 62, 83, 556, 750, 906 |
| CviQI | GTAC | 3 cut(s) | 228, 372, 827 |
| DdeI | CTNAG | 4 cut(s) | 111, 243, 288, 429 |
| DpnI | GATC | 3 cut(s) | 103, 260, 545 |
| DpnII | GATC | 3 cut(s) | 101, 258, 543 |
| DriI | GACNNNNNGTC | 1 cut(s) | 335 |
| Eam1104I | CTCTTC | 1 cut(s) | 557 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 335 |
| EarI | CTCTTC | 1 cut(s) | 557 |
| Eco130I | CCWWGG | 2 cut(s) | 576, 787 |
| Eco147I | AGGCCT | 1 cut(s) | 745 |
| Eco24I | GRGCYC | 1 cut(s) | 584 |
| Eco47I | GGWCC | 2 cut(s) | 325, 572 |
| Eco47III | AGCGCT | 1 cut(s) | 489 |
| Eco57I | CTGAAG | 2 cut(s) | 318, 786 |
| EcoO109I | RGGNCCY | 1 cut(s) | 572 |
| EcoRII | CCWGG | 2 cut(s) | 139, 602 |
| EcoT14I | CCWWGG | 2 cut(s) | 576, 787 |
| EcoT22I | ATGCAT | 1 cut(s) | 889 |
| EcoT38I | GRGCYC | 1 cut(s) | 584 |
| ErhI | CCWWGG | 2 cut(s) | 576, 787 |
| FaeI | CATG | 5 cut(s) | 65, 86, 559, 753, 909 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 223, 255, 771, 803 |
| FaqI | GGGAC | 1 cut(s) | 585 |
| FatI | CATG | 5 cut(s) | 61, 82, 555, 749, 905 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 755 |
| FokI | GGATG | 3 cut(s) | 488, 629, 827 |
| FriOI | GRGCYC | 1 cut(s) | 584 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 755 |
| FspBI | CTAG | 2 cut(s) | 99, 375 |
| GlaI | GCGC | 3 cut(s) | 349, 489, 799 |
| GluI | GCNGC | 2 cut(s) | 59, 755 |
| GsaI | CCCAGC | 1 cut(s) | 570 |
| HaeII | RGCGCY | 2 cut(s) | 491, 801 |
| HaeIII | GGCC | 1 cut(s) | 745 |
| HapII | CCGG | 1 cut(s) | 125 |
| HhaI | GCGC | 3 cut(s) | 350, 490, 800 |
| Hin1II | CATG | 5 cut(s) | 65, 86, 559, 753, 909 |
| Hin6I | GCGC | 3 cut(s) | 348, 488, 798 |
| HinP1I | GCGC | 3 cut(s) | 348, 488, 798 |
| HincII | GTYRAC | 1 cut(s) | 719 |
| HindII | GTYRAC | 1 cut(s) | 719 |
| HinfI | GANTC | 5 cut(s) | 144, 279, 403, 607, 702 |
| HpaII | CCGG | 1 cut(s) | 125 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy166II | GTNNAC | 2 cut(s) | 628, 719 |
| Hpy188I | TCNGA | 2 cut(s) | 244, 329 |
| Hpy188III | TCNNGA | 5 cut(s) | 88, 99, 411, 585, 614 |
| Hpy8I | GTNNAC | 2 cut(s) | 628, 719 |
| Hpy99I | CGWCG | 1 cut(s) | 362 |
| HpyAV | CCTTC | 4 cut(s) | 342, 443, 756, 788 |
| HpyCH4III | ACNGT | 2 cut(s) | 7, 96 |
| HpyCH4V | TGCA | 8 cut(s) | 52, 61, 65, 82, 155, 438, 686, 887 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 58, 751, 760, 779, 817, 893 |
| HpyF3I | CTNAG | 4 cut(s) | 111, 243, 288, 429 |
| Hsp92II | CATG | 5 cut(s) | 65, 86, 559, 753, 909 |
| HspAI | GCGC | 3 cut(s) | 348, 488, 798 |
| KflI | GGGWCCC | 1 cut(s) | 572 |
| Kzo9I | GATC | 3 cut(s) | 101, 258, 543 |
| LmnI | GCTCC | 3 cut(s) | 20, 160, 527 |
| Lsp1109I | GCAGC | 2 cut(s) | 45, 741 |
| LweI | GCATC | 2 cut(s) | 310, 874 |
| MaeI | CTAG | 2 cut(s) | 99, 375 |
| MaeIII | GTNAC | 3 cut(s) | 13, 280, 362 |
| MalI | GATC | 3 cut(s) | 103, 260, 545 |
| MboI | GATC | 3 cut(s) | 101, 258, 543 |
| MboII | GAAGA | 2 cut(s) | 54, 544 |
| MhlI | GDGCHC | 1 cut(s) | 584 |
| MluCI | AATT | 3 cut(s) | 117, 150, 205 |
| MluI | ACGCGT | 1 cut(s) | 385 |
| MlyI | GAGTC | 2 cut(s) | 288, 412 |
| MmeI | TCCRAC | 1 cut(s) | 352 |
| MnlI | CCTC | 6 cut(s) | 151, 179, 295, 424, 518, 558 |
| Mph1103I | ATGCAT | 1 cut(s) | 889 |
| MseI | TTAA | 4 cut(s) | 116, 302, 837, 890 |
| MslI | CAYNNNNRTG | 2 cut(s) | 615, 710 |
| MspI | CCGG | 1 cut(s) | 125 |
| MspR9I | CCNGG | 2 cut(s) | 141, 604 |
| Mva1269I | GAATGC | 2 cut(s) | 180, 222 |
| MvaI | CCWGG | 2 cut(s) | 141, 604 |
| MvnI | CGCG | 1 cut(s) | 387 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 58, 751, 760, 779, 817, 893 |
| NdeII | GATC | 3 cut(s) | 101, 258, 543 |
| NlaIII | CATG | 5 cut(s) | 65, 86, 559, 753, 909 |
| NlaIV | GGNNCC | 3 cut(s) | 162, 573, 574 |
| NmuCI | GTSAC | 1 cut(s) | 280 |
| NsiI | ATGCAT | 1 cut(s) | 889 |
| NspI | RCATGY | 2 cut(s) | 65, 86 |
| PaeI | GCATGC | 1 cut(s) | 65 |
| PceI | AGGCCT | 1 cut(s) | 745 |
| PctI | GAATGC | 2 cut(s) | 180, 222 |
| PfeI | GAWTC | 3 cut(s) | 144, 607, 702 |
| PflFI | GACNNNGTC | 1 cut(s) | 94 |
| PfoI | TCCNGGA | 2 cut(s) | 139, 602 |
| PkrI | GCNGC | 2 cut(s) | 60, 756 |
| PleI | GAGTC | 2 cut(s) | 287, 411 |
| PpsI | GAGTC | 2 cut(s) | 287, 411 |
| PpuMI | RGGWCCY | 1 cut(s) | 572 |
| PsiI | TTATAA | 1 cut(s) | 663 |
| Psp5II | RGGWCCY | 1 cut(s) | 572 |
| Psp6I | CCWGG | 2 cut(s) | 139, 602 |
| PspFI | CCCAGC | 1 cut(s) | 566 |
| PspGI | CCWGG | 2 cut(s) | 139, 602 |
| PspN4I | GGNNCC | 3 cut(s) | 162, 573, 574 |
| PspPI | GGNCC | 2 cut(s) | 325, 572 |
| PspPPI | RGGWCCY | 1 cut(s) | 572 |
| PsyI | GACNNNGTC | 1 cut(s) | 94 |
| RsaI | GTAC | 3 cut(s) | 229, 373, 828 |
| RsaNI | GTAC | 3 cut(s) | 228, 372, 827 |
| RseI | CAYNNNNRTG | 2 cut(s) | 615, 710 |
| Rsr2I | CGGWCCG | 1 cut(s) | 325 |
| RsrII | CGGWCCG | 1 cut(s) | 325 |
| SaqAI | TTAA | 4 cut(s) | 116, 302, 837, 890 |
| SatI | GCNGC | 2 cut(s) | 59, 755 |
| Sau3AI | GATC | 3 cut(s) | 101, 258, 543 |
| Sau96I | GGNCC | 2 cut(s) | 325, 572 |
| SchI | GAGTC | 2 cut(s) | 288, 412 |
| ScrFI | CCNGG | 2 cut(s) | 141, 604 |
| SduI | GDGCHC | 1 cut(s) | 584 |
| SfaNI | GCATC | 2 cut(s) | 310, 874 |
| SinI | GGWCC | 2 cut(s) | 325, 572 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 615, 710 |
| SpeI | ACTAGT | 1 cut(s) | 374 |
| SphI | GCATGC | 1 cut(s) | 65 |
| Sse9I | AATT | 3 cut(s) | 117, 150, 205 |
| SseBI | AGGCCT | 1 cut(s) | 745 |
| SsiI | CCGC | 1 cut(s) | 323 |
| SspI | AATATT | 1 cut(s) | 869 |
| SspMI | CTAG | 2 cut(s) | 99, 375 |
| StuI | AGGCCT | 1 cut(s) | 745 |
| StyD4I | CCNGG | 2 cut(s) | 139, 602 |
| StyI | CCWWGG | 2 cut(s) | 576, 787 |
| TaaI | ACNGT | 2 cut(s) | 7, 96 |
| TaqI | TCGA | 2 cut(s) | 184, 700 |
| TasI | AATT | 3 cut(s) | 117, 150, 205 |
| TatI | WGTACW | 1 cut(s) | 227 |
| TfiI | GAWTC | 3 cut(s) | 144, 607, 702 |
| Tru1I | TTAA | 4 cut(s) | 116, 302, 837, 890 |
| Tru9I | TTAA | 4 cut(s) | 116, 302, 837, 890 |
| TscAI | CASTG | 1 cut(s) | 810 |
| TseFI | GTSAC | 1 cut(s) | 280 |
| TseI | GCWGC | 2 cut(s) | 58, 754 |
| Tsp45I | GTSAC | 1 cut(s) | 280 |
| TspDTI | ATGAA | 5 cut(s) | 411, 544, 599, 654, 738 |
| TspRI | CASTG | 1 cut(s) | 810 |
| Tth111I | GACNNNGTC | 1 cut(s) | 94 |
| VpaK11BI | GGWCC | 2 cut(s) | 325, 572 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XbaI | TCTAGA | 1 cut(s) | 98 |
| XceI | RCATGY | 2 cut(s) | 65, 86 |
| XspI | CTAG | 2 cut(s) | 99, 375 |
| Zsp2I | ATGCAT | 1 cut(s) | 889 |