Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 206 |
| AccB1I | GGYRCC | 1 cut(s) | 85 |
| AccI | GTMKAC | 1 cut(s) | 303 |
| AciI | CCGC | 2 cut(s) | 718, 778 |
| AclWI | GGATC | 1 cut(s) | 71 |
| AcsI | RAATTY | 1 cut(s) | 794 |
| AcuI | CTGAAG | 2 cut(s) | 88, 977 |
| AfaI | GTAC | 2 cut(s) | 49, 944 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 481, 753, 765, 766, 805, 806 |
| AflIII | ACRYGT | 1 cut(s) | 738 |
| AgsI | TTSAA | 2 cut(s) | 568, 817 |
| AluBI | AGCT | 7 cut(s) | 16, 205, 344, 362, 488, 623, 961 |
| AluI | AGCT | 7 cut(s) | 16, 205, 344, 362, 488, 623, 961 |
| Alw26I | GTCTC | 1 cut(s) | 596 |
| AlwI | GGATC | 1 cut(s) | 71 |
| AoxI | GGCC | 2 cut(s) | 92, 712 |
| ApeKI | GCWGC | 1 cut(s) | 782 |
| ApoI | RAATTY | 1 cut(s) | 794 |
| AseI | ATTAAT | 1 cut(s) | 822 |
| AspS9I | GGNCC | 3 cut(s) | 55, 712, 756 |
| AsuHPI | GGTGA | 2 cut(s) | 736, 961 |
| AvaII | GGWCC | 2 cut(s) | 55, 756 |
| AxyI | CCTNAGG | 1 cut(s) | 804 |
| BanI | GGYRCC | 1 cut(s) | 85 |
| BanII | GRGCYC | 1 cut(s) | 677 |
| BbsI | GAAGAC | 1 cut(s) | 144 |
| BbvI | GCAGC | 1 cut(s) | 794 |
| BccI | CCATC | 1 cut(s) | 824 |
| BceAI | ACGGC | 2 cut(s) | 228, 600 |
| BciVI | GTATCC | 2 cut(s) | 163, 529 |
| BclI | TGATCA | 1 cut(s) | 163 |
| BcoDI | GTCTC | 1 cut(s) | 596 |
| BfaI | CTAG | 1 cut(s) | 624 |
| BfmI | CTRYAG | 1 cut(s) | 938 |
| BfuAI | ACCTGC | 1 cut(s) | 206 |
| BfuI | GTATCC | 2 cut(s) | 163, 529 |
| BisI | GCNGC | 1 cut(s) | 783 |
| BlsI | GCNGC | 1 cut(s) | 784 |
| Bme18I | GGWCC | 2 cut(s) | 55, 756 |
| BmgT120I | GGNCC | 3 cut(s) | 55, 712, 756 |
| BmiI | GGNNCC | 3 cut(s) | 56, 87, 758 |
| BmsI | GCATC | 1 cut(s) | 431 |
| BpiI | GAAGAC | 1 cut(s) | 144 |
| BpmI | CTGGAG | 2 cut(s) | 355, 748 |
| BsaJI | CCNNGG | 2 cut(s) | 80, 89 |
| BsaWI | WCCGGW | 1 cut(s) | 33 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 406, 436 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 481, 753, 765, 766, 805, 806 |
| Bse1I | ACTGG | 1 cut(s) | 372 |
| Bse21I | CCTNAGG | 1 cut(s) | 804 |
| BseDI | CCNNGG | 2 cut(s) | 80, 89 |
| BseGI | GGATG | 1 cut(s) | 921 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 481, 753, 765, 766, 805, 806 |
| BseMII | CTCAG | 1 cut(s) | 818 |
| BseNI | ACTGG | 1 cut(s) | 372 |
| BseRI | GAGGAG | 1 cut(s) | 215 |
| BseXI | GCAGC | 1 cut(s) | 794 |
| BshFI | GGCC | 2 cut(s) | 94, 714 |
| BshNI | GGYRCC | 1 cut(s) | 85 |
| BsiSI | CCGG | 1 cut(s) | 34 |
| BslFI | GGGAC | 1 cut(s) | 68 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 481, 753, 765, 766, 805, 806 |
| BsmAI | GTCTC | 1 cut(s) | 596 |
| BsmFI | GGGAC | 1 cut(s) | 68 |
| BsnI | GGCC | 2 cut(s) | 94, 714 |
| Bsp1286I | GDGCHC | 1 cut(s) | 677 |
| Bsp143I | GATC | 3 cut(s) | 76, 154, 163 |
| Bsp19I | CCATGG | 1 cut(s) | 80 |
| BspACI | CCGC | 2 cut(s) | 718, 778 |
| BspANI | GGCC | 2 cut(s) | 94, 714 |
| BspCNI | CTCAG | 1 cut(s) | 817 |
| BspLI | GGNNCC | 3 cut(s) | 56, 87, 758 |
| BspMI | ACCTGC | 1 cut(s) | 206 |
| BspPI | GGATC | 1 cut(s) | 71 |
| BspT107I | GGYRCC | 1 cut(s) | 85 |
| BsrI | ACTGG | 1 cut(s) | 372 |
| BssECI | CCNNGG | 2 cut(s) | 80, 89 |
| BssMI | GATC | 3 cut(s) | 76, 154, 163 |
| BssNAI | GTATAC | 1 cut(s) | 304 |
| BssT1I | CCWWGG | 2 cut(s) | 80, 89 |
| Bst1107I | GTATAC | 1 cut(s) | 304 |
| Bst4CI | ACNGT | 2 cut(s) | 310, 942 |
| BstC8I | GCNNGC | 4 cut(s) | 360, 716, 780, 963 |
| BstDEI | CTNAG | 4 cut(s) | 248, 432, 804, 993 |
| BstDSI | CCRYGG | 1 cut(s) | 80 |
| BstEII | GGTNACC | 1 cut(s) | 320 |
| BstF5I | GGATG | 1 cut(s) | 921 |
| BstKTI | GATC | 3 cut(s) | 79, 157, 166 |
| BstMAI | GTCTC | 1 cut(s) | 596 |
| BstMBI | GATC | 3 cut(s) | 76, 154, 163 |
| BstNSI | RCATGY | 1 cut(s) | 1009 |
| BstPI | GGTNACC | 1 cut(s) | 320 |
| BstSFI | CTRYAG | 1 cut(s) | 938 |
| BstV1I | GCAGC | 1 cut(s) | 794 |
| BstV2I | GAAGAC | 1 cut(s) | 144 |
| BstZ17I | GTATAC | 1 cut(s) | 304 |
| Bsu36I | CCTNAGG | 1 cut(s) | 804 |
| BsuI | GTATCC | 2 cut(s) | 163, 529 |
| BsuRI | GGCC | 2 cut(s) | 94, 714 |
| BtgI | CCRYGG | 1 cut(s) | 80 |
| BtsCI | GGATG | 1 cut(s) | 921 |
| BtsIMutI | CAGTG | 2 cut(s) | 72, 379 |
| BveI | ACCTGC | 1 cut(s) | 206 |
| Cac8I | GCNNGC | 4 cut(s) | 360, 716, 780, 963 |
| Cfr13I | GGNCC | 3 cut(s) | 55, 712, 756 |
| Csp6I | GTAC | 2 cut(s) | 48, 943 |
| CviAII | CATG | 7 cut(s) | 81, 124, 326, 536, 709, 946, 1006 |
| CviQI | GTAC | 2 cut(s) | 48, 943 |
| DdeI | CTNAG | 4 cut(s) | 248, 432, 804, 993 |
| DpnI | GATC | 3 cut(s) | 78, 156, 165 |
| DpnII | GATC | 3 cut(s) | 76, 154, 163 |
| DraI | TTTAAA | 1 cut(s) | 618 |
| Eco130I | CCWWGG | 2 cut(s) | 80, 89 |
| Eco147I | AGGCCT | 1 cut(s) | 94 |
| Eco24I | GRGCYC | 1 cut(s) | 677 |
| Eco47I | GGWCC | 2 cut(s) | 55, 756 |
| Eco57I | CTGAAG | 2 cut(s) | 88, 977 |
| Eco81I | CCTNAGG | 1 cut(s) | 804 |
| Eco91I | GGTNACC | 1 cut(s) | 320 |
| EcoO109I | RGGNCCY | 1 cut(s) | 756 |
| EcoO65I | GGTNACC | 1 cut(s) | 320 |
| EcoRI | GAATTC | 1 cut(s) | 794 |
| EcoT14I | CCWWGG | 2 cut(s) | 80, 89 |
| EcoT38I | GRGCYC | 1 cut(s) | 677 |
| ErhI | CCWWGG | 2 cut(s) | 80, 89 |
| FaeI | CATG | 7 cut(s) | 84, 127, 329, 539, 712, 949, 1009 |
| FaqI | GGGAC | 1 cut(s) | 68 |
| FatI | CATG | 7 cut(s) | 80, 123, 325, 535, 708, 945, 1005 |
| FauI | CCCGC | 1 cut(s) | 771 |
| FbaI | TGATCA | 1 cut(s) | 163 |
| FblI | GTMKAC | 1 cut(s) | 303 |
| Fnu4HI | GCNGC | 1 cut(s) | 783 |
| FokI | GGATG | 1 cut(s) | 908 |
| FriOI | GRGCYC | 1 cut(s) | 677 |
| Fsp4HI | GCNGC | 1 cut(s) | 783 |
| FspBI | CTAG | 1 cut(s) | 624 |
| GluI | GCNGC | 1 cut(s) | 783 |
| GsuI | CTGGAG | 2 cut(s) | 355, 748 |
| HaeIII | GGCC | 2 cut(s) | 94, 714 |
| HapII | CCGG | 1 cut(s) | 34 |
| Hin1II | CATG | 7 cut(s) | 84, 127, 329, 539, 712, 949, 1009 |
| HincII | GTYRAC | 1 cut(s) | 697 |
| HindII | GTYRAC | 1 cut(s) | 697 |
| HindIII | AAGCTT | 2 cut(s) | 360, 959 |
| HinfI | GANTC | 3 cut(s) | 548, 848, 952 |
| HpaII | CCGG | 1 cut(s) | 34 |
| HphI | GGTGA | 2 cut(s) | 736, 961 |
| Hpy166II | GTNNAC | 3 cut(s) | 304, 697, 744 |
| Hpy188I | TCNGA | 2 cut(s) | 650, 957 |
| Hpy188III | TCNNGA | 2 cut(s) | 167, 727 |
| Hpy8I | GTNNAC | 3 cut(s) | 304, 697, 744 |
| HpyAV | CCTTC | 3 cut(s) | 112, 493, 768 |
| HpyCH4III | ACNGT | 2 cut(s) | 310, 942 |
| HpyCH4IV | ACGT | 2 cut(s) | 738, 978 |
| HpyCH4V | TGCA | 3 cut(s) | 358, 527, 965 |
| HpyF3I | CTNAG | 4 cut(s) | 248, 432, 804, 993 |
| HpySE526I | ACGT | 2 cut(s) | 738, 978 |
| Hsp92II | CATG | 7 cut(s) | 84, 127, 329, 539, 712, 949, 1009 |
| Ksp22I | TGATCA | 1 cut(s) | 163 |
| Kzo9I | GATC | 3 cut(s) | 76, 154, 163 |
| LmnI | GCTCC | 2 cut(s) | 13, 202 |
| Lsp1109I | GCAGC | 1 cut(s) | 794 |
| LweI | GCATC | 1 cut(s) | 431 |
| MaeI | CTAG | 1 cut(s) | 624 |
| MaeII | ACGT | 2 cut(s) | 738, 978 |
| MaeIII | GTNAC | 2 cut(s) | 320, 974 |
| MalI | GATC | 3 cut(s) | 78, 156, 165 |
| MboI | GATC | 3 cut(s) | 76, 154, 163 |
| MboII | GAAGA | 5 cut(s) | 149, 415, 694, 697, 822 |
| MhlI | GDGCHC | 1 cut(s) | 677 |
| MluCI | AATT | 6 cut(s) | 386, 507, 579, 652, 794, 819 |
| MlyI | GAGTC | 1 cut(s) | 557 |
| MmeI | TCCRAC | 4 cut(s) | 114, 177, 576, 642 |
| MseI | TTAA | 5 cut(s) | 143, 389, 462, 617, 822 |
| MspI | CCGG | 1 cut(s) | 34 |
| NcoI | CCATGG | 1 cut(s) | 80 |
| NdeII | GATC | 3 cut(s) | 76, 154, 163 |
| NlaIII | CATG | 7 cut(s) | 84, 127, 329, 539, 712, 949, 1009 |
| NlaIV | GGNNCC | 3 cut(s) | 56, 87, 758 |
| NspI | RCATGY | 1 cut(s) | 1009 |
| PceI | AGGCCT | 1 cut(s) | 94 |
| PfeI | GAWTC | 2 cut(s) | 848, 952 |
| PkrI | GCNGC | 1 cut(s) | 784 |
| PleI | GAGTC | 1 cut(s) | 556 |
| PpsI | GAGTC | 1 cut(s) | 556 |
| PpuMI | RGGWCCY | 1 cut(s) | 756 |
| PshBI | ATTAAT | 1 cut(s) | 822 |
| Psp5II | RGGWCCY | 1 cut(s) | 756 |
| PspEI | GGTNACC | 1 cut(s) | 320 |
| PspN4I | GGNNCC | 3 cut(s) | 56, 87, 758 |
| PspPI | GGNCC | 3 cut(s) | 55, 712, 756 |
| PspPPI | RGGWCCY | 1 cut(s) | 756 |
| RsaI | GTAC | 2 cut(s) | 49, 944 |
| RsaNI | GTAC | 2 cut(s) | 48, 943 |
| SaqAI | TTAA | 5 cut(s) | 143, 389, 462, 617, 822 |
| SatI | GCNGC | 1 cut(s) | 783 |
| Sau3AI | GATC | 3 cut(s) | 76, 154, 163 |
| Sau96I | GGNCC | 3 cut(s) | 55, 712, 756 |
| SchI | GAGTC | 1 cut(s) | 557 |
| SduI | GDGCHC | 1 cut(s) | 677 |
| SfaNI | GCATC | 1 cut(s) | 431 |
| SfcI | CTRYAG | 1 cut(s) | 938 |
| SinI | GGWCC | 2 cut(s) | 55, 756 |
| Sse9I | AATT | 6 cut(s) | 386, 507, 579, 652, 794, 819 |
| SseBI | AGGCCT | 1 cut(s) | 94 |
| SsiI | CCGC | 2 cut(s) | 718, 778 |
| SspI | AATATT | 2 cut(s) | 469, 826 |
| SspMI | CTAG | 1 cut(s) | 624 |
| StuI | AGGCCT | 1 cut(s) | 94 |
| StyI | CCWWGG | 2 cut(s) | 80, 89 |
| TaaI | ACNGT | 2 cut(s) | 310, 942 |
| TaiI | ACGT | 2 cut(s) | 741, 981 |
| TaqI | TCGA | 2 cut(s) | 914, 982 |
| TasI | AATT | 6 cut(s) | 386, 507, 579, 652, 794, 819 |
| TatI | WGTACW | 1 cut(s) | 942 |
| TfiI | GAWTC | 2 cut(s) | 848, 952 |
| Tru1I | TTAA | 5 cut(s) | 143, 389, 462, 617, 822 |
| Tru9I | TTAA | 5 cut(s) | 143, 389, 462, 617, 822 |
| TscAI | CASTG | 2 cut(s) | 72, 379 |
| TseI | GCWGC | 1 cut(s) | 782 |
| TspDTI | ATGAA | 4 cut(s) | 105, 436, 697, 910 |
| TspGWI | ACGGA | 1 cut(s) | 281 |
| TspRI | CASTG | 2 cut(s) | 72, 379 |
| VpaK11BI | GGWCC | 2 cut(s) | 55, 756 |
| VspI | ATTAAT | 1 cut(s) | 822 |
| XapI | RAATTY | 1 cut(s) | 794 |
| XceI | RCATGY | 1 cut(s) | 1009 |
| XmiI | GTMKAC | 1 cut(s) | 303 |
| XspI | CTAG | 1 cut(s) | 624 |