Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 102 - 177 | 2.6e-13 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 321 |
| Acc16I | TGCGCA | 1 cut(s) | 407 |
| AccII | CGCG | 1 cut(s) | 13 |
| AciI | CCGC | 1 cut(s) | 386 |
| AfaI | GTAC | 1 cut(s) | 31 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 56, 373 |
| AflIII | ACRYGT | 1 cut(s) | 289 |
| AgsI | TTSAA | 1 cut(s) | 298 |
| AluBI | AGCT | 2 cut(s) | 436, 452 |
| AluI | AGCT | 2 cut(s) | 436, 452 |
| Alw21I | GWGCWC | 1 cut(s) | 438 |
| Alw26I | GTCTC | 3 cut(s) | 76, 357, 494 |
| AoxI | GGCC | 1 cut(s) | 58 |
| ApeKI | GCWGC | 1 cut(s) | 452 |
| AspLEI | GCGC | 3 cut(s) | 13, 130, 408 |
| AspS9I | GGNCC | 3 cut(s) | 59, 262, 490 |
| AsuC2I | CCSGG | 2 cut(s) | 249, 428 |
| AsuHPI | GGTGA | 2 cut(s) | 270, 320 |
| AvaII | GGWCC | 2 cut(s) | 262, 490 |
| BanII | GRGCYC | 1 cut(s) | 438 |
| BauI | CACGAG | 1 cut(s) | 518 |
| Bbv12I | GWGCWC | 1 cut(s) | 438 |
| BbvI | GCAGC | 1 cut(s) | 439 |
| BccI | CCATC | 1 cut(s) | 305 |
| BceAI | ACGGC | 1 cut(s) | 24 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 385, 419, 457, 491 |
| BclI | TGATCA | 1 cut(s) | 85 |
| BcnI | CCSGG | 2 cut(s) | 249, 428 |
| BcoDI | GTCTC | 3 cut(s) | 76, 357, 494 |
| BfmI | CTRYAG | 2 cut(s) | 282, 453 |
| BfoI | RGCGCY | 1 cut(s) | 131 |
| BisI | GCNGC | 1 cut(s) | 453 |
| BlsI | GCNGC | 1 cut(s) | 454 |
| Bme1390I | CCNGG | 2 cut(s) | 249, 428 |
| Bme18I | GGWCC | 2 cut(s) | 262, 490 |
| BmgT120I | GGNCC | 3 cut(s) | 59, 262, 490 |
| BmrFI | CCNGG | 2 cut(s) | 249, 428 |
| BmsI | GCATC | 1 cut(s) | 487 |
| BpuMI | CCSGG | 2 cut(s) | 249, 428 |
| BsaI | GGTCTC | 1 cut(s) | 357 |
| BsaJI | CCNNGG | 2 cut(s) | 35, 265 |
| BsaWI | WCCGGW | 1 cut(s) | 330 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 243, 273 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 56, 373 |
| Bse118I | RCCGGY | 1 cut(s) | 178 |
| Bse3DI | GCAATG | 1 cut(s) | 192 |
| BseDI | CCNNGG | 2 cut(s) | 35, 265 |
| BseGI | GGATG | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 56, 373 |
| BseMI | GCAATG | 1 cut(s) | 192 |
| BseXI | GCAGC | 1 cut(s) | 439 |
| Bsh1236I | CGCG | 1 cut(s) | 13 |
| BshFI | GGCC | 1 cut(s) | 60 |
| BsiHKAI | GWGCWC | 1 cut(s) | 438 |
| BsiSI | CCGG | 4 cut(s) | 179, 248, 331, 427 |
| BslFI | GGGAC | 1 cut(s) | 389 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 56, 373 |
| BsmAI | GTCTC | 3 cut(s) | 76, 357, 494 |
| BsmBI | CGTCTC | 1 cut(s) | 494 |
| BsmFI | GGGAC | 1 cut(s) | 389 |
| BsnI | GGCC | 1 cut(s) | 60 |
| Bso31I | GGTCTC | 1 cut(s) | 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 438 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspACI | CCGC | 1 cut(s) | 386 |
| BspANI | GGCC | 1 cut(s) | 60 |
| BspFNI | CGCG | 1 cut(s) | 13 |
| BspHI | TCATGA | 1 cut(s) | 481 |
| BspMAI | CTGCAG | 1 cut(s) | 457 |
| BspTNI | GGTCTC | 1 cut(s) | 357 |
| BsrDI | GCAATG | 1 cut(s) | 192 |
| BsrFI | RCCGGY | 1 cut(s) | 178 |
| BssAI | RCCGGY | 1 cut(s) | 178 |
| BssECI | CCNNGG | 2 cut(s) | 35, 265 |
| BssMI | GATC | 1 cut(s) | 85 |
| BssSI | CACGAG | 1 cut(s) | 518 |
| BssT1I | CCWWGG | 1 cut(s) | 35 |
| Bst2BI | CACGAG | 1 cut(s) | 518 |
| BstC8I | GCNNGC | 3 cut(s) | 180, 234, 450 |
| BstDSI | CCRYGG | 1 cut(s) | 265 |
| BstF5I | GGATG | 1 cut(s) | 339 |
| BstFNI | CGCG | 1 cut(s) | 13 |
| BstH2I | RGCGCY | 1 cut(s) | 131 |
| BstHHI | GCGC | 3 cut(s) | 13, 130, 408 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMAI | GTCTC | 3 cut(s) | 76, 357, 494 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 52, 175, 188, 419, 449 |
| BstNSI | RCATGY | 2 cut(s) | 236, 293 |
| BstSCI | CCNGG | 2 cut(s) | 247, 426 |
| BstSFI | CTRYAG | 2 cut(s) | 282, 453 |
| BstUI | CGCG | 1 cut(s) | 13 |
| BstV1I | GCAGC | 1 cut(s) | 439 |
| BsuRI | GGCC | 1 cut(s) | 60 |
| BtgI | CCRYGG | 1 cut(s) | 265 |
| BtsCI | GGATG | 1 cut(s) | 339 |
| BtsI | GCAGTG | 1 cut(s) | 408 |
| BtsIMutI | CAGTG | 1 cut(s) | 408 |
| Cac8I | GCNNGC | 3 cut(s) | 180, 234, 450 |
| CciI | TCATGA | 1 cut(s) | 481 |
| CfoI | GCGC | 3 cut(s) | 13, 130, 408 |
| Cfr10I | RCCGGY | 1 cut(s) | 178 |
| Cfr13I | GGNCC | 3 cut(s) | 59, 262, 490 |
| Csp6I | GTAC | 1 cut(s) | 30 |
| CviAII | CATG | 7 cut(s) | 56, 112, 142, 233, 290, 482, 533 |
| CviJI | RGCY | 8 cut(s) | 5, 46, 60, 169, 191, 274, 436, 452 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 46, 60, 169, 191, 274, 436, 452 |
| CviQI | GTAC | 1 cut(s) | 30 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| Ecl136II | GAGCTC | 1 cut(s) | 436 |
| Eco130I | CCWWGG | 1 cut(s) | 35 |
| Eco24I | GRGCYC | 1 cut(s) | 438 |
| Eco31I | GGTCTC | 1 cut(s) | 357 |
| Eco32I | GATATC | 1 cut(s) | 471 |
| Eco47I | GGWCC | 2 cut(s) | 262, 490 |
| Eco53kI | GAGCTC | 1 cut(s) | 436 |
| EcoICRI | GAGCTC | 1 cut(s) | 436 |
| EcoRV | GATATC | 1 cut(s) | 471 |
| EcoT14I | CCWWGG | 1 cut(s) | 35 |
| EcoT38I | GRGCYC | 1 cut(s) | 438 |
| ErhI | CCWWGG | 1 cut(s) | 35 |
| Esp3I | CGTCTC | 1 cut(s) | 494 |
| FaeI | CATG | 7 cut(s) | 59, 115, 145, 236, 293, 485, 536 |
| FaqI | GGGAC | 1 cut(s) | 389 |
| FatI | CATG | 7 cut(s) | 55, 111, 141, 232, 289, 481, 532 |
| FauI | CCCGC | 1 cut(s) | 379 |
| FbaI | TGATCA | 1 cut(s) | 85 |
| Fnu4HI | GCNGC | 1 cut(s) | 453 |
| FokI | GGATG | 1 cut(s) | 346 |
| FriOI | GRGCYC | 1 cut(s) | 438 |
| Fsp4HI | GCNGC | 1 cut(s) | 453 |
| FspAI | RTGCGCAY | 1 cut(s) | 407 |
| FspI | TGCGCA | 1 cut(s) | 407 |
| GlaI | GCGC | 3 cut(s) | 12, 129, 407 |
| GluI | GCNGC | 1 cut(s) | 453 |
| HaeII | RGCGCY | 1 cut(s) | 131 |
| HaeIII | GGCC | 1 cut(s) | 60 |
| HapII | CCGG | 4 cut(s) | 179, 248, 331, 427 |
| HhaI | GCGC | 3 cut(s) | 13, 130, 408 |
| Hin1II | CATG | 7 cut(s) | 59, 115, 145, 236, 293, 485, 536 |
| Hin6I | GCGC | 3 cut(s) | 11, 128, 406 |
| HinP1I | GCGC | 3 cut(s) | 11, 128, 406 |
| HinfI | GANTC | 1 cut(s) | 416 |
| HpaII | CCGG | 4 cut(s) | 179, 248, 331, 427 |
| HphI | GGTGA | 2 cut(s) | 270, 320 |
| Hpy166II | GTNNAC | 2 cut(s) | 32, 265 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy188III | TCNNGA | 1 cut(s) | 482 |
| Hpy8I | GTNNAC | 2 cut(s) | 32, 265 |
| HpyAV | CCTTC | 2 cut(s) | 250, 481 |
| HpyCH4V | TGCA | 6 cut(s) | 55, 232, 448, 455, 478, 523 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 52, 175, 188, 419, 449 |
| Hsp92II | CATG | 7 cut(s) | 59, 115, 145, 236, 293, 485, 536 |
| HspAI | GCGC | 3 cut(s) | 11, 128, 406 |
| KroI | GCCGGC | 1 cut(s) | 178 |
| KroNI | GCCGGC | 1 cut(s) | 180 |
| Ksp22I | TGATCA | 1 cut(s) | 85 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| LmnI | GCTCC | 1 cut(s) | 441 |
| LpnPI | CCDG | 5 cut(s) | 75, 192, 261, 344, 440 |
| Lsp1109I | GCAGC | 1 cut(s) | 439 |
| LweI | GCATC | 1 cut(s) | 487 |
| MaeIII | GTNAC | 1 cut(s) | 39 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MboII | GAAGA | 1 cut(s) | 231 |
| MhlI | GDGCHC | 1 cut(s) | 438 |
| MluCI | AATT | 3 cut(s) | 91, 98, 494 |
| MmeI | TCCRAC | 1 cut(s) | 538 |
| MnlI | CCTC | 5 cut(s) | 12, 57, 154, 390, 521 |
| MroNI | GCCGGC | 1 cut(s) | 178 |
| MseI | TTAA | 1 cut(s) | 213 |
| MspI | CCGG | 4 cut(s) | 179, 248, 331, 427 |
| MspR9I | CCNGG | 2 cut(s) | 249, 428 |
| MvnI | CGCG | 1 cut(s) | 13 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 52, 175, 188, 419, 449 |
| NaeI | GCCGGC | 1 cut(s) | 180 |
| NciI | CCSGG | 2 cut(s) | 249, 428 |
| NdeII | GATC | 1 cut(s) | 85 |
| NgoMIV | GCCGGC | 1 cut(s) | 178 |
| NlaIII | CATG | 7 cut(s) | 59, 115, 145, 236, 293, 485, 536 |
| NmuCI | GTSAC | 1 cut(s) | 39 |
| NsbI | TGCGCA | 1 cut(s) | 407 |
| NspI | RCATGY | 2 cut(s) | 236, 293 |
| PaeI | GCATGC | 1 cut(s) | 236 |
| PagI | TCATGA | 1 cut(s) | 481 |
| PciI | ACATGT | 1 cut(s) | 289 |
| PdiI | GCCGGC | 1 cut(s) | 180 |
| PfeI | GAWTC | 1 cut(s) | 416 |
| PfoI | TCCNGGA | 1 cut(s) | 247 |
| PkrI | GCNGC | 1 cut(s) | 454 |
| PscI | ACATGT | 1 cut(s) | 289 |
| PsiI | TTATAA | 1 cut(s) | 321 |
| Psp124BI | GAGCTC | 1 cut(s) | 438 |
| PspPI | GGNCC | 3 cut(s) | 59, 262, 490 |
| PstI | CTGCAG | 1 cut(s) | 457 |
| RsaI | GTAC | 1 cut(s) | 31 |
| RsaNI | GTAC | 1 cut(s) | 30 |
| SacI | GAGCTC | 1 cut(s) | 438 |
| SaqAI | TTAA | 1 cut(s) | 213 |
| SatI | GCNGC | 1 cut(s) | 453 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| Sau96I | GGNCC | 3 cut(s) | 59, 262, 490 |
| ScrFI | CCNGG | 2 cut(s) | 249, 428 |
| SduI | GDGCHC | 1 cut(s) | 438 |
| SetI | ASST | 8 cut(s) | 23, 37, 261, 283, 343, 438, 454, 492 |
| SfaNI | GCATC | 1 cut(s) | 487 |
| SfcI | CTRYAG | 2 cut(s) | 282, 453 |
| SinI | GGWCC | 2 cut(s) | 262, 490 |
| SphI | GCATGC | 1 cut(s) | 236 |
| Sse9I | AATT | 3 cut(s) | 91, 98, 494 |
| SsiI | CCGC | 1 cut(s) | 386 |
| SspI | AATATT | 1 cut(s) | 307 |
| SstI | GAGCTC | 1 cut(s) | 438 |
| StyD4I | CCNGG | 2 cut(s) | 247, 426 |
| StyI | CCWWGG | 1 cut(s) | 35 |
| TaqI | TCGA | 1 cut(s) | 460 |
| TasI | AATT | 3 cut(s) | 91, 98, 494 |
| TfiI | GAWTC | 1 cut(s) | 416 |
| Tru1I | TTAA | 1 cut(s) | 213 |
| Tru9I | TTAA | 1 cut(s) | 213 |
| TscAI | CASTG | 1 cut(s) | 415 |
| TseFI | GTSAC | 1 cut(s) | 39 |
| TseI | GCWGC | 1 cut(s) | 452 |
| Tsp45I | GTSAC | 1 cut(s) | 39 |
| TspDTI | ATGAA | 5 cut(s) | 100, 158, 231, 350, 521 |
| TspGWI | ACGGA | 1 cut(s) | 518 |
| TspRI | CASTG | 1 cut(s) | 415 |
| VpaK11BI | GGWCC | 2 cut(s) | 262, 490 |
| XceI | RCATGY | 2 cut(s) | 236, 293 |