Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 172 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 83 |
| AflIII | ACRYGT | 1 cut(s) | 103 |
| AluBI | AGCT | 1 cut(s) | 213 |
| AluI | AGCT | 1 cut(s) | 213 |
| Alw26I | GTCTC | 2 cut(s) | 170, 182 |
| ApeKI | GCWGC | 1 cut(s) | 73 |
| AseI | ATTAAT | 1 cut(s) | 225 |
| BbvI | GCAGC | 1 cut(s) | 85 |
| BccI | CCATC | 1 cut(s) | 121 |
| BcoDI | GTCTC | 2 cut(s) | 170, 182 |
| BfuAI | ACCTGC | 1 cut(s) | 172 |
| BglII | AGATCT | 1 cut(s) | 256 |
| BisI | GCNGC | 1 cut(s) | 74 |
| BlsI | GCNGC | 1 cut(s) | 75 |
| BmsI | GCATC | 1 cut(s) | 284 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 83 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 83 |
| BseMII | CTCAG | 2 cut(s) | 177, 251 |
| BseXI | GCAGC | 1 cut(s) | 85 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 83 |
| BsmAI | GTCTC | 2 cut(s) | 170, 182 |
| Bsp143I | GATC | 1 cut(s) | 256 |
| BspCNI | CTCAG | 2 cut(s) | 178, 252 |
| BspMI | ACCTGC | 1 cut(s) | 172 |
| BssMI | GATC | 1 cut(s) | 256 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| BstC8I | GCNNGC | 1 cut(s) | 121 |
| BstDEI | CTNAG | 3 cut(s) | 145, 186, 260 |
| BstKTI | GATC | 1 cut(s) | 259 |
| BstMAI | GTCTC | 2 cut(s) | 170, 182 |
| BstMBI | GATC | 1 cut(s) | 256 |
| BstNSI | RCATGY | 2 cut(s) | 107, 123 |
| BstV1I | GCAGC | 1 cut(s) | 85 |
| BstX2I | RGATCY | 1 cut(s) | 256 |
| BstYI | RGATCY | 1 cut(s) | 256 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| BveI | ACCTGC | 1 cut(s) | 172 |
| Cac8I | GCNNGC | 1 cut(s) | 121 |
| CviAII | CATG | 2 cut(s) | 104, 120 |
| CviJI | RGCY | 2 cut(s) | 76, 213 |
| CviKI_1 | RGCY | 2 cut(s) | 76, 213 |
| DdeI | CTNAG | 3 cut(s) | 145, 186, 260 |
| DpnI | GATC | 1 cut(s) | 258 |
| DpnII | GATC | 1 cut(s) | 256 |
| FaeI | CATG | 2 cut(s) | 107, 123 |
| FaiI | YATR | 7 cut(s) | 48, 56, 105, 121, 170, 252, 269 |
| FatI | CATG | 2 cut(s) | 103, 119 |
| Fnu4HI | GCNGC | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 1 cut(s) | 74 |
| GluI | GCNGC | 1 cut(s) | 74 |
| Hin1II | CATG | 2 cut(s) | 107, 123 |
| HinfI | GANTC | 1 cut(s) | 182 |
| Hpy188I | TCNGA | 3 cut(s) | 187, 217, 261 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 2 cut(s) | 123, 196 |
| HpyF3I | CTNAG | 3 cut(s) | 145, 186, 260 |
| Hsp92II | CATG | 2 cut(s) | 107, 123 |
| Kzo9I | GATC | 1 cut(s) | 256 |
| LpnPI | CCDG | 4 cut(s) | 48, 111, 164, 177 |
| Lsp1109I | GCAGC | 1 cut(s) | 85 |
| LweI | GCATC | 1 cut(s) | 284 |
| MalI | GATC | 1 cut(s) | 258 |
| MboI | GATC | 1 cut(s) | 256 |
| MboII | GAAGA | 1 cut(s) | 266 |
| MfeI | CAATTG | 1 cut(s) | 132 |
| MflI | RGATCY | 1 cut(s) | 256 |
| MluCI | AATT | 5 cut(s) | 27, 90, 132, 203, 286 |
| MnlI | CCTC | 1 cut(s) | 62 |
| MseI | TTAA | 2 cut(s) | 89, 225 |
| MunI | CAATTG | 1 cut(s) | 132 |
| NdeII | GATC | 1 cut(s) | 256 |
| NlaIII | CATG | 2 cut(s) | 107, 123 |
| NspI | RCATGY | 2 cut(s) | 107, 123 |
| PaeI | GCATGC | 1 cut(s) | 123 |
| PciI | ACATGT | 1 cut(s) | 103 |
| PfeI | GAWTC | 1 cut(s) | 182 |
| PkrI | GCNGC | 1 cut(s) | 75 |
| PscI | ACATGT | 1 cut(s) | 103 |
| PshBI | ATTAAT | 1 cut(s) | 225 |
| PsuI | RGATCY | 1 cut(s) | 256 |
| SaqAI | TTAA | 2 cut(s) | 89, 225 |
| SatI | GCNGC | 1 cut(s) | 74 |
| Sau3AI | GATC | 1 cut(s) | 256 |
| SetI | ASST | 2 cut(s) | 166, 215 |
| SfaNI | GCATC | 1 cut(s) | 284 |
| SgeI | CNNG | 7 cut(s) | 75, 110, 116, 132, 136, 163, 176 |
| SphI | GCATGC | 1 cut(s) | 123 |
| Sse9I | AATT | 5 cut(s) | 27, 90, 132, 203, 286 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TasI | AATT | 5 cut(s) | 27, 90, 132, 203, 286 |
| TfiI | GAWTC | 1 cut(s) | 182 |
| Tru1I | TTAA | 2 cut(s) | 89, 225 |
| Tru9I | TTAA | 2 cut(s) | 89, 225 |
| TscAI | CASTG | 1 cut(s) | 198 |
| TseI | GCWGC | 1 cut(s) | 73 |
| TspDTI | ATGAA | 2 cut(s) | 57, 267 |
| TspRI | CASTG | 1 cut(s) | 198 |
| VspI | ATTAAT | 1 cut(s) | 225 |
| XceI | RCATGY | 2 cut(s) | 107, 123 |