ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 443 |
| AciI | CCGC | 1 cut(s) | 311 |
| AcoI | YGGCCR | 2 cut(s) | 75, 263 |
| AfaI | GTAC | 2 cut(s) | 176, 373 |
| AgsI | TTSAA | 2 cut(s) | 236, 320 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 203, 235 |
| AluBI | AGCT | 4 cut(s) | 40, 201, 345, 355 |
| AluI | AGCT | 4 cut(s) | 40, 201, 345, 355 |
| Alw26I | GTCTC | 1 cut(s) | 114 |
| Ama87I | CYCGRG | 1 cut(s) | 111 |
| AoxI | GGCC | 2 cut(s) | 75, 263 |
| ApeKI | GCWGC | 2 cut(s) | 37, 355 |
| AsuHPI | GGTGA | 1 cut(s) | 31 |
| AsuII | TTCGAA | 1 cut(s) | 206 |
| AvaI | CYCGRG | 1 cut(s) | 111 |
| BalI | TGGCCA | 2 cut(s) | 77, 265 |
| BbvI | GCAGC | 2 cut(s) | 49, 342 |
| BcoDI | GTCTC | 1 cut(s) | 114 |
| BisI | GCNGC | 2 cut(s) | 38, 356 |
| BlsI | GCNGC | 2 cut(s) | 39, 357 |
| BmeT110I | CYCGRG | 1 cut(s) | 111 |
| BmsI | GCATC | 2 cut(s) | 369, 391 |
| Bpu14I | TTCGAA | 1 cut(s) | 206 |
| BpuEI | CTTGAG | 1 cut(s) | 240 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 203, 233, 443, 473 |
| Bse3DI | GCAATG | 1 cut(s) | 141 |
| BseGI | GGATG | 1 cut(s) | 130 |
| BseMI | GCAATG | 1 cut(s) | 141 |
| BseMII | CTCAG | 2 cut(s) | 193, 366 |
| BseXI | GCAGC | 2 cut(s) | 49, 342 |
| BshFI | GGCC | 2 cut(s) | 77, 265 |
| BsiHKCI | CYCGRG | 1 cut(s) | 111 |
| BsmAI | GTCTC | 1 cut(s) | 114 |
| BsnI | GGCC | 2 cut(s) | 77, 265 |
| BsoBI | CYCGRG | 1 cut(s) | 111 |
| Bsp119I | TTCGAA | 1 cut(s) | 206 |
| BspACI | CCGC | 1 cut(s) | 311 |
| BspANI | GGCC | 2 cut(s) | 77, 265 |
| BspCNI | CTCAG | 2 cut(s) | 192, 367 |
| BspT104I | TTCGAA | 1 cut(s) | 206 |
| BsrDI | GCAATG | 1 cut(s) | 141 |
| BstBI | TTCGAA | 1 cut(s) | 206 |
| BstDEI | CTNAG | 3 cut(s) | 179, 278, 375 |
| BstF5I | GGATG | 1 cut(s) | 130 |
| BstMAI | GTCTC | 1 cut(s) | 114 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 361, 476 |
| BstV1I | GCAGC | 2 cut(s) | 49, 342 |
| BsuRI | GGCC | 2 cut(s) | 77, 265 |
| BtsCI | GGATG | 1 cut(s) | 130 |
| Csp6I | GTAC | 2 cut(s) | 175, 372 |
| CviAII | CATG | 3 cut(s) | 167, 331, 447 |
| CviQI | GTAC | 2 cut(s) | 175, 372 |
| DdeI | CTNAG | 3 cut(s) | 179, 278, 375 |
| EaeI | YGGCCR | 2 cut(s) | 75, 263 |
| Eco88I | CYCGRG | 1 cut(s) | 111 |
| EcoT22I | ATGCAT | 1 cut(s) | 384 |
| FaeI | CATG | 3 cut(s) | 170, 334, 450 |
| FatI | CATG | 3 cut(s) | 166, 330, 446 |
| FblI | GTMKAC | 1 cut(s) | 443 |
| Fnu4HI | GCNGC | 2 cut(s) | 38, 356 |
| FokI | GGATG | 1 cut(s) | 137 |
| Fsp4HI | GCNGC | 2 cut(s) | 38, 356 |
| GluI | GCNGC | 2 cut(s) | 38, 356 |
| HaeIII | GGCC | 2 cut(s) | 77, 265 |
| Hin1II | CATG | 3 cut(s) | 170, 334, 450 |
| HincII | GTYRAC | 2 cut(s) | 62, 151 |
| HindII | GTYRAC | 2 cut(s) | 62, 151 |
| HinfI | GANTC | 2 cut(s) | 274, 433 |
| HpaI | GTTAAC | 1 cut(s) | 151 |
| HphI | GGTGA | 1 cut(s) | 31 |
| Hpy166II | GTNNAC | 5 cut(s) | 62, 151, 301, 372, 444 |
| Hpy188I | TCNGA | 1 cut(s) | 182 |
| Hpy8I | GTNNAC | 5 cut(s) | 62, 151, 301, 372, 444 |
| HpyAV | CCTTC | 2 cut(s) | 202, 286 |
| HpyCH4V | TGCA | 3 cut(s) | 37, 134, 382 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 361, 476 |
| HpyF3I | CTNAG | 3 cut(s) | 179, 278, 375 |
| Hsp92II | CATG | 3 cut(s) | 170, 334, 450 |
| KspAI | GTTAAC | 1 cut(s) | 151 |
| LpnPI | CCDG | 6 cut(s) | 59, 107, 273, 279, 388, 412 |
| Lsp1109I | GCAGC | 2 cut(s) | 49, 342 |
| LweI | GCATC | 2 cut(s) | 369, 391 |
| MboII | GAAGA | 1 cut(s) | 442 |
| MlsI | TGGCCA | 2 cut(s) | 77, 265 |
| MluNI | TGGCCA | 2 cut(s) | 77, 265 |
| MlyI | GAGTC | 1 cut(s) | 268 |
| MnlI | CCTC | 2 cut(s) | 188, 205 |
| Mox20I | TGGCCA | 2 cut(s) | 77, 265 |
| Mph1103I | ATGCAT | 1 cut(s) | 384 |
| MscI | TGGCCA | 2 cut(s) | 77, 265 |
| MseI | TTAA | 2 cut(s) | 150, 389 |
| MslI | CAYNNNNRTG | 1 cut(s) | 335 |
| Msp20I | TGGCCA | 2 cut(s) | 77, 265 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 361, 476 |
| NlaIII | CATG | 3 cut(s) | 170, 334, 450 |
| NsiI | ATGCAT | 1 cut(s) | 384 |
| NspV | TTCGAA | 1 cut(s) | 206 |
| PfeI | GAWTC | 1 cut(s) | 433 |
| PkrI | GCNGC | 2 cut(s) | 39, 357 |
| PleI | GAGTC | 1 cut(s) | 268 |
| PpsI | GAGTC | 1 cut(s) | 268 |
| RsaI | GTAC | 2 cut(s) | 176, 373 |
| RsaNI | GTAC | 2 cut(s) | 175, 372 |
| RseI | CAYNNNNRTG | 1 cut(s) | 335 |
| SaqAI | TTAA | 2 cut(s) | 150, 389 |
| SatI | GCNGC | 2 cut(s) | 38, 356 |
| SchI | GAGTC | 1 cut(s) | 268 |
| SetI | ASST | 7 cut(s) | 42, 180, 203, 243, 262, 347, 357 |
| SfaNI | GCATC | 2 cut(s) | 369, 391 |
| SfuI | TTCGAA | 1 cut(s) | 206 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 335 |
| SmlI | CTYRAG | 1 cut(s) | 255 |
| SmoI | CTYRAG | 1 cut(s) | 255 |
| SsiI | CCGC | 1 cut(s) | 311 |
| TaqI | TCGA | 1 cut(s) | 206 |
| TatI | WGTACW | 1 cut(s) | 371 |
| TfiI | GAWTC | 1 cut(s) | 433 |
| Tru1I | TTAA | 2 cut(s) | 150, 389 |
| Tru9I | TTAA | 2 cut(s) | 150, 389 |
| TseI | GCWGC | 2 cut(s) | 37, 355 |
| TspDTI | ATGAA | 3 cut(s) | 17, 60, 425 |
| XmiI | GTMKAC | 1 cut(s) | 443 |
| Zsp2I | ATGCAT | 1 cut(s) | 384 |