Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1282, 1921 |
| Acc36I | ACCTGC | 2 cut(s) | 1282, 1921 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 174, 1171 |
| AccBSI | CCGCTC | 1 cut(s) | 251 |
| AciI | CCGC | 6 cut(s) | 251, 287, 335, 602, 838, 856 |
| AclWI | GGATC | 4 cut(s) | 345, 624, 906, 1433 |
| AcoI | YGGCCR | 2 cut(s) | 936, 1209 |
| AcsI | RAATTY | 7 cut(s) | 316, 443, 500, 568, 1290, 1497, 1940 |
| AcuI | CTGAAG | 1 cut(s) | 642 |
| AfaI | GTAC | 4 cut(s) | 1482, 1494, 1893, 1980 |
| AfeI | AGCGCT | 1 cut(s) | 1831 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 148, 174, 561, 659, 1171, 1239 |
| AflIII | ACRYGT | 1 cut(s) | 190 |
| AjnI | CCWGG | 2 cut(s) | 1185, 1483 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1158, 1190, 1704, 1736 |
| AleI | CACNNNNGTG | 1 cut(s) | 233 |
| Alw26I | GTCTC | 4 cut(s) | 526, 721, 828, 2013 |
| AlwI | GGATC | 4 cut(s) | 345, 624, 906, 1433 |
| Aor51HI | AGCGCT | 1 cut(s) | 1831 |
| AoxI | GGCC | 4 cut(s) | 936, 1076, 1209, 1728 |
| ApeKI | GCWGC | 8 cut(s) | 431, 495, 796, 1250, 1472, 1646, 1930, 1971 |
| ApoI | RAATTY | 7 cut(s) | 316, 443, 500, 568, 1290, 1497, 1940 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1181, 1213 |
| AspLEI | GCGC | 2 cut(s) | 796, 1832 |
| AspS9I | GGNCC | 3 cut(s) | 515, 1450, 1595 |
| AsuC2I | CCSGG | 1 cut(s) | 246 |
| AsuHPI | GGTGA | 4 cut(s) | 642, 1448, 1580, 1902 |
| AvaII | GGWCC | 3 cut(s) | 515, 1450, 1595 |
| AxyI | CCTNAGG | 1 cut(s) | 1992 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 177, 210, 1552, 1585 |
| BauI | CACGAG | 1 cut(s) | 121 |
| BbsI | GAAGAC | 1 cut(s) | 1696 |
| BbvCI | CCTCAGC | 1 cut(s) | 2074 |
| BbvI | GCAGC | 8 cut(s) | 418, 507, 808, 1262, 1484, 1633, 1942, 1983 |
| BccI | CCATC | 5 cut(s) | 358, 899, 1109, 1961, 1990 |
| BciT130I | CCWGG | 2 cut(s) | 1187, 1485 |
| BciVI | GTATCC | 5 cut(s) | 178, 677, 1143, 1553, 1600 |
| BcnI | CCSGG | 1 cut(s) | 246 |
| BcoDI | GTCTC | 4 cut(s) | 526, 721, 828, 2013 |
| BfaI | CTAG | 7 cut(s) | 20, 29, 74, 156, 332, 420, 1652 |
| BfmI | CTRYAG | 2 cut(s) | 1275, 1854 |
| BfoI | RGCGCY | 1 cut(s) | 1833 |
| BfuAI | ACCTGC | 2 cut(s) | 1282, 1921 |
| BfuI | GTATCC | 5 cut(s) | 178, 677, 1143, 1553, 1600 |
| BisI | GCNGC | 9 cut(s) | 288, 432, 496, 797, 1251, 1473, 1647, 1931, 1972 |
| BlpI | GCTNAGC | 1 cut(s) | 987 |
| BlsI | GCNGC | 9 cut(s) | 289, 433, 497, 798, 1252, 1474, 1648, 1932, 1973 |
| Bme1390I | CCNGG | 3 cut(s) | 246, 1187, 1485 |
| Bme18I | GGWCC | 3 cut(s) | 515, 1450, 1595 |
| BmgT120I | GGNCC | 3 cut(s) | 515, 1450, 1595 |
| BmrFI | CCNGG | 3 cut(s) | 246, 1187, 1485 |
| BmsI | GCATC | 6 cut(s) | 60, 434, 656, 792, 1308, 1792 |
| BpiI | GAAGAC | 1 cut(s) | 1696 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2074 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 987 |
| BpuEI | CTTGAG | 1 cut(s) | 753 |
| BpuMI | CCSGG | 1 cut(s) | 246 |
| Bsa29I | ATCGAT | 1 cut(s) | 1221 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1119 |
| BsaI | GGTCTC | 1 cut(s) | 828 |
| BsaJI | CCNNGG | 4 cut(s) | 356, 525, 1185, 1484 |
| BsaWI | WCCGGW | 1 cut(s) | 1433 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 148, 174, 561, 659, 1171, 1239 |
| Bse118I | RCCGGY | 2 cut(s) | 934, 1078 |
| Bse1I | ACTGG | 1 cut(s) | 1931 |
| Bse21I | CCTNAGG | 1 cut(s) | 1992 |
| Bse3DI | GCAATG | 3 cut(s) | 441, 462, 1253 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1119 |
| BseBI | CCWGG | 2 cut(s) | 1187, 1485 |
| BseCI | ATCGAT | 1 cut(s) | 1221 |
| BseDI | CCNNGG | 4 cut(s) | 356, 525, 1185, 1484 |
| BseGI | GGATG | 6 cut(s) | 783, 1120, 1299, 1617, 1722, 1982 |
| BseJI | GATNNNNATC | 1 cut(s) | 1119 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 148, 174, 561, 659, 1171, 1239 |
| BseMI | GCAATG | 3 cut(s) | 441, 462, 1253 |
| BseMII | CTCAG | 4 cut(s) | 744, 858, 978, 2006 |
| BseNI | ACTGG | 1 cut(s) | 1931 |
| BseRI | GAGGAG | 1 cut(s) | 309 |
| BseX3I | CGGCCG | 1 cut(s) | 936 |
| BseXI | GCAGC | 8 cut(s) | 418, 507, 808, 1262, 1484, 1633, 1942, 1983 |
| BseYI | CCCAGC | 3 cut(s) | 368, 679, 778 |
| BsgI | GTGCAG | 2 cut(s) | 1596, 1632 |
| Bsh1285I | CGRYCG | 2 cut(s) | 541, 939 |
| BshFI | GGCC | 4 cut(s) | 938, 1078, 1211, 1730 |
| BshVI | ATCGAT | 1 cut(s) | 1221 |
| BsiEI | CGRYCG | 2 cut(s) | 541, 939 |
| BsiSI | CCGG | 4 cut(s) | 245, 935, 1079, 1434 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 148, 174, 561, 659, 1171, 1239 |
| BsmAI | GTCTC | 4 cut(s) | 526, 721, 828, 2013 |
| BsnI | GGCC | 4 cut(s) | 938, 1078, 1211, 1730 |
| Bso31I | GGTCTC | 1 cut(s) | 828 |
| Bsp143I | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 987 |
| BspACI | CCGC | 6 cut(s) | 251, 287, 335, 602, 838, 856 |
| BspANI | GGCC | 4 cut(s) | 938, 1078, 1211, 1730 |
| BspCNI | CTCAG | 4 cut(s) | 745, 857, 979, 2005 |
| BspDI | ATCGAT | 1 cut(s) | 1221 |
| BspMAI | CTGCAG | 1 cut(s) | 1279 |
| BspMI | ACCTGC | 2 cut(s) | 1282, 1921 |
| BspPI | GGATC | 4 cut(s) | 345, 624, 906, 1433 |
| BspQI | GCTCTTC | 1 cut(s) | 445 |
| BspTNI | GGTCTC | 1 cut(s) | 828 |
| BsrBI | CCGCTC | 1 cut(s) | 251 |
| BsrDI | GCAATG | 3 cut(s) | 441, 462, 1253 |
| BsrFI | RCCGGY | 2 cut(s) | 934, 1078 |
| BsrI | ACTGG | 1 cut(s) | 1931 |
| BssAI | RCCGGY | 2 cut(s) | 934, 1078 |
| BssECI | CCNNGG | 4 cut(s) | 356, 525, 1185, 1484 |
| BssMI | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| BssSI | CACGAG | 1 cut(s) | 121 |
| BssT1I | CCWWGG | 2 cut(s) | 356, 525 |
| Bst2BI | CACGAG | 1 cut(s) | 121 |
| Bst2UI | CCWGG | 2 cut(s) | 1187, 1485 |
| Bst4CI | ACNGT | 2 cut(s) | 1193, 1369 |
| Bst6I | CTCTTC | 3 cut(s) | 445, 633, 1346 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 431 |
| BstC8I | GCNNGC | 4 cut(s) | 36, 1129, 1260, 1516 |
| BstDEI | CTNAG | 7 cut(s) | 753, 844, 987, 1307, 1554, 1992, 2074 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 657 |
| BstF5I | GGATG | 6 cut(s) | 783, 1120, 1299, 1617, 1722, 1982 |
| BstH2I | RGCGCY | 1 cut(s) | 1833 |
| BstHHI | GCGC | 2 cut(s) | 796, 1832 |
| BstKTI | GATC | 7 cut(s) | 340, 352, 541, 619, 775, 901, 1441 |
| BstMAI | GTCTC | 4 cut(s) | 526, 721, 828, 2013 |
| BstMBI | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| BstMCI | CGRYCG | 2 cut(s) | 541, 939 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 431, 1259, 1268, 1646, 1652 |
| BstNI | CCWGG | 2 cut(s) | 1187, 1485 |
| BstNSI | RCATGY | 2 cut(s) | 194, 995 |
| BstSCI | CCNGG | 3 cut(s) | 244, 1185, 1483 |
| BstSFI | CTRYAG | 2 cut(s) | 1275, 1854 |
| BstV1I | GCAGC | 8 cut(s) | 418, 507, 808, 1262, 1484, 1633, 1942, 1983 |
| BstV2I | GAAGAC | 1 cut(s) | 1696 |
| BstX2I | RGATCY | 1 cut(s) | 898 |
| BstYI | RGATCY | 1 cut(s) | 898 |
| BstZI | CGGCCG | 1 cut(s) | 936 |
| Bsu15I | ATCGAT | 1 cut(s) | 1221 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1992 |
| BsuI | GTATCC | 5 cut(s) | 178, 677, 1143, 1553, 1600 |
| BsuRI | GGCC | 4 cut(s) | 938, 1078, 1211, 1730 |
| BsuTUI | ATCGAT | 1 cut(s) | 1221 |
| BtsCI | GGATG | 6 cut(s) | 783, 1120, 1299, 1617, 1722, 1982 |
| BtsI | GCAGTG | 1 cut(s) | 2005 |
| BtsIMutI | CAGTG | 3 cut(s) | 1301, 1924, 2005 |
| BveI | ACCTGC | 2 cut(s) | 1282, 1921 |
| Cac8I | GCNNGC | 4 cut(s) | 36, 1129, 1260, 1516 |
| CfoI | GCGC | 2 cut(s) | 796, 1832 |
| Cfr10I | RCCGGY | 2 cut(s) | 934, 1078 |
| Cfr13I | GGNCC | 3 cut(s) | 515, 1450, 1595 |
| ClaI | ATCGAT | 1 cut(s) | 1221 |
| Csp6I | GTAC | 4 cut(s) | 1481, 1493, 1892, 1979 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 902, 937 |
| CviAII | CATG | 6 cut(s) | 191, 312, 790, 992, 1768, 2027 |
| CviQI | GTAC | 4 cut(s) | 1481, 1493, 1892, 1979 |
| DdeI | CTNAG | 7 cut(s) | 753, 844, 987, 1307, 1554, 1992, 2074 |
| DpnI | GATC | 7 cut(s) | 339, 351, 540, 618, 774, 900, 1440 |
| DpnII | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| DraI | TTTAAA | 1 cut(s) | 2038 |
| EaeI | YGGCCR | 2 cut(s) | 936, 1209 |
| EagI | CGGCCG | 1 cut(s) | 936 |
| Eam1104I | CTCTTC | 3 cut(s) | 445, 633, 1346 |
| EarI | CTCTTC | 3 cut(s) | 445, 633, 1346 |
| EclXI | CGGCCG | 1 cut(s) | 936 |
| Eco130I | CCWWGG | 2 cut(s) | 356, 525 |
| Eco31I | GGTCTC | 1 cut(s) | 828 |
| Eco47I | GGWCC | 3 cut(s) | 515, 1450, 1595 |
| Eco47III | AGCGCT | 1 cut(s) | 1831 |
| Eco52I | CGGCCG | 1 cut(s) | 936 |
| Eco57I | CTGAAG | 1 cut(s) | 642 |
| Eco81I | CCTNAGG | 1 cut(s) | 1992 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 657 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1450, 1595 |
| EcoRII | CCWGG | 2 cut(s) | 1185, 1483 |
| EcoT14I | CCWWGG | 2 cut(s) | 356, 525 |
| ErhI | CCWWGG | 2 cut(s) | 356, 525 |
| FaeI | CATG | 6 cut(s) | 194, 315, 793, 995, 1771, 2030 |
| FatI | CATG | 6 cut(s) | 190, 311, 789, 991, 1767, 2026 |
| FauNDI | CATATG | 1 cut(s) | 1505 |
| Fnu4HI | GCNGC | 9 cut(s) | 288, 432, 496, 797, 1251, 1473, 1647, 1931, 1972 |
| FokI | GGATG | 6 cut(s) | 770, 1127, 1286, 1604, 1729, 1969 |
| Fsp4HI | GCNGC | 9 cut(s) | 288, 432, 496, 797, 1251, 1473, 1647, 1931, 1972 |
| FspBI | CTAG | 7 cut(s) | 20, 29, 74, 156, 332, 420, 1652 |
| GlaI | GCGC | 2 cut(s) | 795, 1831 |
| GluI | GCNGC | 9 cut(s) | 288, 432, 496, 797, 1251, 1473, 1647, 1931, 1972 |
| GsaI | CCCAGC | 3 cut(s) | 372, 683, 782 |
| HaeII | RGCGCY | 1 cut(s) | 1833 |
| HaeIII | GGCC | 4 cut(s) | 938, 1078, 1211, 1730 |
| HapII | CCGG | 4 cut(s) | 245, 935, 1079, 1434 |
| HhaI | GCGC | 2 cut(s) | 796, 1832 |
| Hin1II | CATG | 6 cut(s) | 194, 315, 793, 995, 1771, 2030 |
| Hin6I | GCGC | 2 cut(s) | 794, 1830 |
| HinP1I | GCGC | 2 cut(s) | 794, 1830 |
| HincII | GTYRAC | 2 cut(s) | 25, 139 |
| HindII | GTYRAC | 2 cut(s) | 25, 139 |
| HindIII | AAGCTT | 2 cut(s) | 743, 1512 |
| HinfI | GANTC | 7 cut(s) | 117, 273, 404, 534, 611, 951, 1342 |
| HpaI | GTTAAC | 1 cut(s) | 25 |
| HpaII | CCGG | 4 cut(s) | 245, 935, 1079, 1434 |
| HphI | GGTGA | 4 cut(s) | 642, 1448, 1580, 1902 |
| Hpy166II | GTNNAC | 4 cut(s) | 25, 139, 267, 626 |
| Hpy188I | TCNGA | 6 cut(s) | 67, 449, 610, 616, 754, 1242 |
| Hpy188III | TCNNGA | 8 cut(s) | 121, 156, 408, 660, 770, 1046, 1346, 1877 |
| Hpy8I | GTNNAC | 4 cut(s) | 25, 139, 267, 626 |
| HpyAV | CCTTC | 2 cut(s) | 1483, 1881 |
| HpyCH4III | ACNGT | 2 cut(s) | 1193, 1369 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 431, 1259, 1268, 1646, 1652 |
| HpyF3I | CTNAG | 7 cut(s) | 753, 844, 987, 1307, 1554, 1992, 2074 |
| Hsp92II | CATG | 6 cut(s) | 194, 315, 793, 995, 1771, 2030 |
| HspAI | GCGC | 2 cut(s) | 794, 1830 |
| KspAI | GTTAAC | 1 cut(s) | 25 |
| Kzo9I | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| LguI | GCTCTTC | 1 cut(s) | 445 |
| LmnI | GCTCC | 3 cut(s) | 248, 304, 1104 |
| Lsp1109I | GCAGC | 8 cut(s) | 418, 507, 808, 1262, 1484, 1633, 1942, 1983 |
| LweI | GCATC | 6 cut(s) | 60, 434, 656, 792, 1308, 1792 |
| MaeI | CTAG | 7 cut(s) | 20, 29, 74, 156, 332, 420, 1652 |
| MaeIII | GTNAC | 2 cut(s) | 808, 1668 |
| MalI | GATC | 7 cut(s) | 339, 351, 540, 618, 774, 900, 1440 |
| MbiI | CCGCTC | 1 cut(s) | 251 |
| MboI | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| MboII | GAAGA | 8 cut(s) | 462, 650, 888, 1326, 1363, 1422, 1696, 1801 |
| MfeI | CAATTG | 1 cut(s) | 2067 |
| MflI | RGATCY | 1 cut(s) | 898 |
| MlyI | GAGTC | 4 cut(s) | 413, 528, 945, 1351 |
| MseI | TTAA | 5 cut(s) | 24, 815, 1371, 1583, 2037 |
| MslI | CAYNNNNRTG | 3 cut(s) | 233, 788, 1019 |
| MspA1I | CMGCKG | 4 cut(s) | 431, 679, 778, 986 |
| MspI | CCGG | 4 cut(s) | 245, 935, 1079, 1434 |
| MspR9I | CCNGG | 3 cut(s) | 246, 1187, 1485 |
| MunI | CAATTG | 1 cut(s) | 2067 |
| MvaI | CCWGG | 2 cut(s) | 1187, 1485 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 431, 1259, 1268, 1646, 1652 |
| NciI | CCSGG | 1 cut(s) | 246 |
| NdeI | CATATG | 1 cut(s) | 1505 |
| NdeII | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| NlaIII | CATG | 6 cut(s) | 194, 315, 793, 995, 1771, 2030 |
| NmuCI | GTSAC | 1 cut(s) | 1668 |
| NspI | RCATGY | 2 cut(s) | 194, 995 |
| OliI | CACNNNNGTG | 1 cut(s) | 233 |
| PaqCI | CACCTGC | 2 cut(s) | 1282, 1921 |
| PciI | ACATGT | 1 cut(s) | 190 |
| PciSI | GCTCTTC | 1 cut(s) | 445 |
| PfeI | GAWTC | 3 cut(s) | 117, 273, 611 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 174, 1171 |
| PkrI | GCNGC | 9 cut(s) | 289, 433, 497, 798, 1252, 1474, 1648, 1932, 1973 |
| Ple19I | CGATCG | 1 cut(s) | 541 |
| PleI | GAGTC | 4 cut(s) | 412, 528, 945, 1350 |
| PpsI | GAGTC | 4 cut(s) | 412, 528, 945, 1350 |
| PpuMI | RGGWCCY | 2 cut(s) | 1450, 1595 |
| PscI | ACATGT | 1 cut(s) | 190 |
| Psp5II | RGGWCCY | 2 cut(s) | 1450, 1595 |
| Psp6I | CCWGG | 2 cut(s) | 1185, 1483 |
| PspFI | CCCAGC | 3 cut(s) | 368, 679, 778 |
| PspGI | CCWGG | 2 cut(s) | 1185, 1483 |
| PspPI | GGNCC | 3 cut(s) | 515, 1450, 1595 |
| PspPPI | RGGWCCY | 2 cut(s) | 1450, 1595 |
| PstI | CTGCAG | 1 cut(s) | 1279 |
| PsuI | RGATCY | 1 cut(s) | 898 |
| PvuI | CGATCG | 1 cut(s) | 541 |
| PvuII | CAGCTG | 4 cut(s) | 431, 679, 778, 986 |
| RsaI | GTAC | 4 cut(s) | 1482, 1494, 1893, 1980 |
| RsaNI | GTAC | 4 cut(s) | 1481, 1493, 1892, 1979 |
| RseI | CAYNNNNRTG | 3 cut(s) | 233, 788, 1019 |
| SapI | GCTCTTC | 1 cut(s) | 445 |
| SaqAI | TTAA | 5 cut(s) | 24, 815, 1371, 1583, 2037 |
| SatI | GCNGC | 9 cut(s) | 288, 432, 496, 797, 1251, 1473, 1647, 1931, 1972 |
| Sau3AI | GATC | 7 cut(s) | 337, 349, 538, 616, 772, 898, 1438 |
| Sau96I | GGNCC | 3 cut(s) | 515, 1450, 1595 |
| SchI | GAGTC | 4 cut(s) | 413, 528, 945, 1351 |
| ScrFI | CCNGG | 3 cut(s) | 246, 1187, 1485 |
| SfaNI | GCATC | 6 cut(s) | 60, 434, 656, 792, 1308, 1792 |
| SfcI | CTRYAG | 2 cut(s) | 1275, 1854 |
| SinI | GGWCC | 3 cut(s) | 515, 1450, 1595 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 233, 788, 1019 |
| SmlI | CTYRAG | 1 cut(s) | 768 |
| SmoI | CTYRAG | 1 cut(s) | 768 |
| SsiI | CCGC | 6 cut(s) | 251, 287, 335, 602, 838, 856 |
| SspMI | CTAG | 7 cut(s) | 20, 29, 74, 156, 332, 420, 1652 |
| StyD4I | CCNGG | 3 cut(s) | 244, 1185, 1483 |
| StyI | CCWWGG | 2 cut(s) | 356, 525 |
| TaaI | ACNGT | 2 cut(s) | 1193, 1369 |
| TaqI | TCGA | 5 cut(s) | 537, 586, 709, 1011, 1221 |
| TaqII | GACCGA | 1 cut(s) | 746 |
| TauI | GCSGC | 1 cut(s) | 290 |
| TfiI | GAWTC | 3 cut(s) | 117, 273, 611 |
| Tru1I | TTAA | 5 cut(s) | 24, 815, 1371, 1583, 2037 |
| Tru9I | TTAA | 5 cut(s) | 24, 815, 1371, 1583, 2037 |
| TscAI | CASTG | 3 cut(s) | 1301, 1931, 2005 |
| TseFI | GTSAC | 1 cut(s) | 1668 |
| TseI | GCWGC | 8 cut(s) | 431, 495, 796, 1250, 1472, 1646, 1930, 1971 |
| Tsp45I | GTSAC | 1 cut(s) | 1668 |
| TspDTI | ATGAA | 5 cut(s) | 396, 728, 773, 924, 1421 |
| TspRI | CASTG | 3 cut(s) | 1301, 1931, 2005 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 174, 1171 |
| VpaK11BI | GGWCC | 3 cut(s) | 515, 1450, 1595 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 657 |
| XapI | RAATTY | 7 cut(s) | 316, 443, 500, 568, 1290, 1497, 1940 |
| XbaI | TCTAGA | 1 cut(s) | 155 |
| XceI | RCATGY | 2 cut(s) | 194, 995 |
| XspI | CTAG | 7 cut(s) | 20, 29, 74, 156, 332, 420, 1652 |