Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 3 cut(s) | 172, 240, 427 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 462 |
| AgsI | TTSAA | 2 cut(s) | 125, 230 |
| AluBI | AGCT | 2 cut(s) | 392, 480 |
| AluI | AGCT | 2 cut(s) | 392, 480 |
| Alw26I | GTCTC | 1 cut(s) | 326 |
| ApoI | RAATTY | 3 cut(s) | 172, 240, 427 |
| AseI | ATTAAT | 1 cut(s) | 219 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 173 |
| AsuC2I | CCSGG | 1 cut(s) | 457 |
| AsuHPI | GGTGA | 3 cut(s) | 89, 89, 281 |
| BccI | CCATC | 1 cut(s) | 146 |
| BcnI | CCSGG | 1 cut(s) | 457 |
| BcoDI | GTCTC | 1 cut(s) | 326 |
| BfaI | CTAG | 4 cut(s) | 297, 393, 477, 481 |
| BfmI | CTRYAG | 1 cut(s) | 387 |
| BlpI | GCTNAGC | 1 cut(s) | 468 |
| Bme1390I | CCNGG | 1 cut(s) | 457 |
| BmrFI | CCNGG | 1 cut(s) | 457 |
| BmsI | GCATC | 1 cut(s) | 411 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 468 |
| BpuMI | CCSGG | 1 cut(s) | 457 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 462 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseGI | GGATG | 3 cut(s) | 138, 205, 358 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BseMII | CTCAG | 2 cut(s) | 171, 459 |
| BsiSI | CCGG | 1 cut(s) | 456 |
| BslFI | GGGAC | 1 cut(s) | 397 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 462 |
| BsmAI | GTCTC | 1 cut(s) | 326 |
| BsmFI | GGGAC | 1 cut(s) | 397 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 468 |
| BspCNI | CTCAG | 2 cut(s) | 172, 460 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BssT1I | CCWWGG | 1 cut(s) | 100 |
| Bst4CI | ACNGT | 2 cut(s) | 257, 388 |
| BstC8I | GCNNGC | 1 cut(s) | 285 |
| BstDEI | CTNAG | 2 cut(s) | 180, 468 |
| BstF5I | GGATG | 3 cut(s) | 138, 205, 358 |
| BstMAI | GTCTC | 1 cut(s) | 326 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 293 |
| BstNSI | RCATGY | 2 cut(s) | 38, 72 |
| BstSCI | CCNGG | 1 cut(s) | 455 |
| BstSFI | CTRYAG | 1 cut(s) | 387 |
| BtsCI | GGATG | 3 cut(s) | 138, 205, 358 |
| Cac8I | GCNNGC | 1 cut(s) | 285 |
| CviAII | CATG | 2 cut(s) | 35, 69 |
| CviJI | RGCY | 5 cut(s) | 283, 392, 467, 472, 480 |
| CviKI_1 | RGCY | 5 cut(s) | 283, 392, 467, 472, 480 |
| DdeI | CTNAG | 2 cut(s) | 180, 468 |
| Eco130I | CCWWGG | 1 cut(s) | 100 |
| EcoRI | GAATTC | 1 cut(s) | 240 |
| EcoT14I | CCWWGG | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 100 |
| FaeI | CATG | 2 cut(s) | 38, 72 |
| FaqI | GGGAC | 1 cut(s) | 397 |
| FatI | CATG | 2 cut(s) | 34, 68 |
| FokI | GGATG | 3 cut(s) | 125, 212, 365 |
| FspBI | CTAG | 4 cut(s) | 297, 393, 477, 481 |
| HapII | CCGG | 1 cut(s) | 456 |
| Hin1II | CATG | 2 cut(s) | 38, 72 |
| HinfI | GANTC | 2 cut(s) | 59, 131 |
| HpaII | CCGG | 1 cut(s) | 456 |
| HphI | GGTGA | 3 cut(s) | 89, 89, 281 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 142, 350 |
| HpyCH4III | ACNGT | 2 cut(s) | 257, 388 |
| HpyCH4V | TGCA | 2 cut(s) | 38, 424 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 293 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 468 |
| Hsp92II | CATG | 2 cut(s) | 38, 72 |
| LpnPI | CCDG | 3 cut(s) | 155, 335, 469 |
| LweI | GCATC | 1 cut(s) | 411 |
| MaeI | CTAG | 4 cut(s) | 297, 393, 477, 481 |
| MaeIII | GTNAC | 3 cut(s) | 77, 128, 271 |
| MboII | GAAGA | 1 cut(s) | 181 |
| MluCI | AATT | 4 cut(s) | 172, 240, 376, 427 |
| MlyI | GAGTC | 1 cut(s) | 125 |
| MmeI | TCCRAC | 1 cut(s) | 86 |
| MnlI | CCTC | 3 cut(s) | 175, 427, 483 |
| MroXI | GAANNNNTTC | 1 cut(s) | 173 |
| MseI | TTAA | 2 cut(s) | 51, 219 |
| MspI | CCGG | 1 cut(s) | 456 |
| MspR9I | CCNGG | 1 cut(s) | 457 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 293 |
| NciI | CCSGG | 1 cut(s) | 457 |
| NlaIII | CATG | 2 cut(s) | 38, 72 |
| NmuCI | GTSAC | 2 cut(s) | 77, 128 |
| NspI | RCATGY | 2 cut(s) | 38, 72 |
| PdmI | GAANNNNTTC | 1 cut(s) | 173 |
| PfeI | GAWTC | 1 cut(s) | 59 |
| PleI | GAGTC | 1 cut(s) | 125 |
| PpsI | GAGTC | 1 cut(s) | 125 |
| PshBI | ATTAAT | 1 cut(s) | 219 |
| SaqAI | TTAA | 2 cut(s) | 51, 219 |
| SchI | GAGTC | 1 cut(s) | 125 |
| ScrFI | CCNGG | 1 cut(s) | 457 |
| SetI | ASST | 6 cut(s) | 106, 186, 294, 394, 406, 482 |
| SfaNI | GCATC | 1 cut(s) | 411 |
| SfcI | CTRYAG | 1 cut(s) | 387 |
| Sse9I | AATT | 4 cut(s) | 172, 240, 376, 427 |
| SspMI | CTAG | 4 cut(s) | 297, 393, 477, 481 |
| StyD4I | CCNGG | 1 cut(s) | 455 |
| StyI | CCWWGG | 1 cut(s) | 100 |
| TaaI | ACNGT | 2 cut(s) | 257, 388 |
| TaqI | TCGA | 2 cut(s) | 244, 419 |
| TasI | AATT | 4 cut(s) | 172, 240, 376, 427 |
| TfiI | GAWTC | 1 cut(s) | 59 |
| Tru1I | TTAA | 2 cut(s) | 51, 219 |
| Tru9I | TTAA | 2 cut(s) | 51, 219 |
| TseFI | GTSAC | 2 cut(s) | 77, 128 |
| Tsp45I | GTSAC | 2 cut(s) | 77, 128 |
| TspGWI | ACGGA | 1 cut(s) | 290 |
| VspI | ATTAAT | 1 cut(s) | 219 |
| XapI | RAATTY | 3 cut(s) | 172, 240, 427 |
| XceI | RCATGY | 2 cut(s) | 38, 72 |
| XmnI | GAANNNNTTC | 1 cut(s) | 173 |
| XspI | CTAG | 4 cut(s) | 297, 393, 477, 481 |