ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 3 - 97 | 6.4e-12 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 106, 283 |
| AfaI | GTAC | 1 cut(s) | 357 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 32, 33, 106, 159, 283 |
| AflII | CTTAAG | 1 cut(s) | 217 |
| AgsI | TTSAA | 1 cut(s) | 200 |
| AjnI | CCWGG | 1 cut(s) | 348 |
| Alw26I | GTCTC | 3 cut(s) | 119, 307, 326 |
| ApeKI | GCWGC | 2 cut(s) | 11, 137 |
| AsuHPI | GGTGA | 1 cut(s) | 89 |
| BbvI | GCAGC | 2 cut(s) | 23, 124 |
| BciT130I | CCWGG | 1 cut(s) | 350 |
| BcoDI | GTCTC | 3 cut(s) | 119, 307, 326 |
| BfaI | CTAG | 3 cut(s) | 8, 297, 311 |
| BfmI | CTRYAG | 1 cut(s) | 138 |
| BfrI | CTTAAG | 1 cut(s) | 217 |
| BglII | AGATCT | 1 cut(s) | 41 |
| BisI | GCNGC | 2 cut(s) | 12, 138 |
| BlsI | GCNGC | 2 cut(s) | 13, 139 |
| Bme1390I | CCNGG | 1 cut(s) | 350 |
| BmrFI | CCNGG | 1 cut(s) | 350 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 66, 98, 161, 193 |
| BsaJI | CCNNGG | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 32, 33, 106, 159, 283 |
| BseBI | CCWGG | 1 cut(s) | 350 |
| BseDI | CCNNGG | 1 cut(s) | 100 |
| BseGI | GGATG | 1 cut(s) | 358 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 32, 33, 106, 159, 283 |
| BseMII | CTCAG | 1 cut(s) | 171 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseXI | GCAGC | 2 cut(s) | 23, 124 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 32, 33, 106, 159, 283 |
| BsmAI | GTCTC | 3 cut(s) | 119, 307, 326 |
| BsmI | GAATGC | 1 cut(s) | 47 |
| Bsp143I | GATC | 1 cut(s) | 41 |
| BspCNI | CTCAG | 1 cut(s) | 172 |
| BspMAI | CTGCAG | 1 cut(s) | 142 |
| BspTI | CTTAAG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 100 |
| BssMI | GATC | 1 cut(s) | 41 |
| BssT1I | CCWWGG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 1 cut(s) | 350 |
| BstAFI | CTTAAG | 1 cut(s) | 217 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 17, 293 |
| BstC8I | GCNNGC | 1 cut(s) | 22 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstF5I | GGATG | 1 cut(s) | 358 |
| BstKTI | GATC | 1 cut(s) | 44 |
| BstMAI | GTCTC | 3 cut(s) | 119, 307, 326 |
| BstMBI | GATC | 1 cut(s) | 41 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 17, 74, 293 |
| BstNI | CCWGG | 1 cut(s) | 350 |
| BstSCI | CCNGG | 1 cut(s) | 348 |
| BstSFI | CTRYAG | 1 cut(s) | 138 |
| BstV1I | GCAGC | 2 cut(s) | 23, 124 |
| BstX2I | RGATCY | 1 cut(s) | 41 |
| BstYI | RGATCY | 1 cut(s) | 41 |
| BtsCI | GGATG | 1 cut(s) | 358 |
| BtsI | GCAGTG | 1 cut(s) | 147 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 1 cut(s) | 22 |
| Csp6I | GTAC | 1 cut(s) | 356 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 1 cut(s) | 68 |
| CviKI_1 | RGCY | 1 cut(s) | 68 |
| CviQI | GTAC | 1 cut(s) | 356 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| DpnI | GATC | 1 cut(s) | 43 |
| DpnII | GATC | 1 cut(s) | 41 |
| Eco130I | CCWWGG | 1 cut(s) | 100 |
| EcoRII | CCWGG | 1 cut(s) | 348 |
| EcoT14I | CCWWGG | 1 cut(s) | 100 |
| ErhI | CCWWGG | 1 cut(s) | 100 |
| FaeI | CATG | 1 cut(s) | 169 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 200, 232 |
| FatI | CATG | 1 cut(s) | 165 |
| FauNDI | CATATG | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 2 cut(s) | 12, 138 |
| Fsp4HI | GCNGC | 2 cut(s) | 12, 138 |
| FspBI | CTAG | 3 cut(s) | 8, 297, 311 |
| GluI | GCNGC | 2 cut(s) | 12, 138 |
| Hin1II | CATG | 1 cut(s) | 169 |
| HincII | GTYRAC | 1 cut(s) | 118 |
| HindII | GTYRAC | 1 cut(s) | 118 |
| HinfI | GANTC | 2 cut(s) | 81, 334 |
| HphI | GGTGA | 1 cut(s) | 89 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy188III | TCNNGA | 2 cut(s) | 124, 257 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyCH4V | TGCA | 4 cut(s) | 20, 47, 140, 207 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 17, 74, 293 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| Kzo9I | GATC | 1 cut(s) | 41 |
| LmnI | GCTCC | 1 cut(s) | 162 |
| LpnPI | CCDG | 5 cut(s) | 18, 40, 63, 335, 362 |
| Lsp1109I | GCAGC | 2 cut(s) | 23, 124 |
| MaeI | CTAG | 3 cut(s) | 8, 297, 311 |
| MaeIII | GTNAC | 1 cut(s) | 271 |
| MalI | GATC | 1 cut(s) | 43 |
| MboI | GATC | 1 cut(s) | 41 |
| MboII | GAAGA | 1 cut(s) | 212 |
| MfeI | CAATTG | 1 cut(s) | 15 |
| MflI | RGATCY | 1 cut(s) | 41 |
| MluCI | AATT | 1 cut(s) | 15 |
| MlyI | GAGTC | 2 cut(s) | 75, 328 |
| MnlI | CCTC | 4 cut(s) | 58, 95, 163, 175 |
| MseI | TTAA | 1 cut(s) | 218 |
| MspCI | CTTAAG | 1 cut(s) | 217 |
| MspR9I | CCNGG | 1 cut(s) | 350 |
| MunI | CAATTG | 1 cut(s) | 15 |
| Mva1269I | GAATGC | 1 cut(s) | 47 |
| MvaI | CCWGG | 1 cut(s) | 350 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 17, 74, 293 |
| NdeI | CATATG | 1 cut(s) | 54 |
| NdeII | GATC | 1 cut(s) | 41 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NmuCI | GTSAC | 1 cut(s) | 271 |
| PctI | GAATGC | 1 cut(s) | 47 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 106, 283 |
| PfoI | TCCNGGA | 1 cut(s) | 348 |
| PkrI | GCNGC | 2 cut(s) | 13, 139 |
| PleI | GAGTC | 2 cut(s) | 75, 328 |
| PpsI | GAGTC | 2 cut(s) | 75, 328 |
| Psp6I | CCWGG | 1 cut(s) | 348 |
| PspGI | CCWGG | 1 cut(s) | 348 |
| PstI | CTGCAG | 1 cut(s) | 142 |
| PsuI | RGATCY | 1 cut(s) | 41 |
| RsaI | GTAC | 1 cut(s) | 357 |
| RsaNI | GTAC | 1 cut(s) | 356 |
| SaqAI | TTAA | 1 cut(s) | 218 |
| SatI | GCNGC | 2 cut(s) | 12, 138 |
| Sau3AI | GATC | 1 cut(s) | 41 |
| SchI | GAGTC | 2 cut(s) | 75, 328 |
| ScrFI | CCNGG | 1 cut(s) | 350 |
| SetI | ASST | 4 cut(s) | 106, 186, 250, 312 |
| SfcI | CTRYAG | 1 cut(s) | 138 |
| SmlI | CTYRAG | 1 cut(s) | 217 |
| SmoI | CTYRAG | 1 cut(s) | 217 |
| Sse9I | AATT | 1 cut(s) | 15 |
| SspMI | CTAG | 3 cut(s) | 8, 297, 311 |
| StyD4I | CCNGG | 1 cut(s) | 348 |
| StyI | CCWWGG | 1 cut(s) | 100 |
| TaqI | TCGA | 1 cut(s) | 123 |
| TasI | AATT | 1 cut(s) | 15 |
| TatI | WGTACW | 1 cut(s) | 355 |
| Tru1I | TTAA | 1 cut(s) | 218 |
| Tru9I | TTAA | 1 cut(s) | 218 |
| TscAI | CASTG | 1 cut(s) | 147 |
| TseFI | GTSAC | 1 cut(s) | 271 |
| TseI | GCWGC | 2 cut(s) | 11, 137 |
| Tsp45I | GTSAC | 1 cut(s) | 271 |
| TspRI | CASTG | 1 cut(s) | 147 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 106, 283 |
| Vha464I | CTTAAG | 1 cut(s) | 217 |
| XspI | CTAG | 3 cut(s) | 8, 297, 311 |