Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 2 cut(s) | 31, 97 |
| AciI | CCGC | 2 cut(s) | 270, 342 |
| AcoI | YGGCCR | 2 cut(s) | 274, 343 |
| AcsI | RAATTY | 3 cut(s) | 50, 144, 306 |
| AcuI | CTGAAG | 1 cut(s) | 128 |
| AfaI | GTAC | 1 cut(s) | 177 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 218 |
| AgsI | TTSAA | 3 cut(s) | 8, 42, 87 |
| AoxI | GGCC | 3 cut(s) | 231, 274, 343 |
| ApoI | RAATTY | 3 cut(s) | 50, 144, 306 |
| AseI | ATTAAT | 1 cut(s) | 23 |
| AsuHPI | GGTGA | 1 cut(s) | 175 |
| BalI | TGGCCA | 1 cut(s) | 276 |
| BccI | CCATC | 1 cut(s) | 236 |
| BfaI | CTAG | 1 cut(s) | 327 |
| BisI | GCNGC | 1 cut(s) | 343 |
| BlsI | GCNGC | 1 cut(s) | 344 |
| BmsI | GCATC | 1 cut(s) | 217 |
| BpmI | CTGGAG | 1 cut(s) | 116 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 218 |
| Bse1I | ACTGG | 3 cut(s) | 133, 183, 307 |
| Bse3DI | GCAATG | 1 cut(s) | 67 |
| BseGI | GGATG | 2 cut(s) | 208, 288 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BseMI | GCAATG | 1 cut(s) | 67 |
| BseNI | ACTGG | 3 cut(s) | 133, 183, 307 |
| BshFI | GGCC | 3 cut(s) | 233, 276, 345 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 218 |
| BsnI | GGCC | 3 cut(s) | 233, 276, 345 |
| Bsp143I | GATC | 2 cut(s) | 58, 187 |
| BspACI | CCGC | 2 cut(s) | 270, 342 |
| BspANI | GGCC | 3 cut(s) | 233, 276, 345 |
| BsrDI | GCAATG | 1 cut(s) | 67 |
| BsrI | ACTGG | 3 cut(s) | 133, 183, 307 |
| BssMI | GATC | 2 cut(s) | 58, 187 |
| BssNAI | GTATAC | 1 cut(s) | 98 |
| Bst1107I | GTATAC | 1 cut(s) | 98 |
| Bst6I | CTCTTC | 1 cut(s) | 339 |
| BstDEI | CTNAG | 1 cut(s) | 338 |
| BstF5I | GGATG | 2 cut(s) | 208, 288 |
| BstKTI | GATC | 2 cut(s) | 61, 190 |
| BstMBI | GATC | 2 cut(s) | 58, 187 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 205 |
| BstZ17I | GTATAC | 1 cut(s) | 98 |
| BsuRI | GGCC | 3 cut(s) | 233, 276, 345 |
| BtsCI | GGATG | 2 cut(s) | 208, 288 |
| Csp6I | GTAC | 1 cut(s) | 176 |
| CviJI | RGCY | 5 cut(s) | 199, 233, 276, 326, 345 |
| CviKI_1 | RGCY | 5 cut(s) | 199, 233, 276, 326, 345 |
| CviQI | GTAC | 1 cut(s) | 176 |
| DdeI | CTNAG | 1 cut(s) | 338 |
| DpnI | GATC | 2 cut(s) | 60, 189 |
| DpnII | GATC | 2 cut(s) | 58, 187 |
| EaeI | YGGCCR | 2 cut(s) | 274, 343 |
| Eam1104I | CTCTTC | 1 cut(s) | 339 |
| EarI | CTCTTC | 1 cut(s) | 339 |
| Eco57I | CTGAAG | 1 cut(s) | 128 |
| FaiI | YATR | 6 cut(s) | 98, 123, 139, 141, 314, 353 |
| FblI | GTMKAC | 2 cut(s) | 31, 97 |
| Fnu4HI | GCNGC | 1 cut(s) | 343 |
| FokI | GGATG | 2 cut(s) | 195, 275 |
| Fsp4HI | GCNGC | 1 cut(s) | 343 |
| FspBI | CTAG | 1 cut(s) | 327 |
| GluI | GCNGC | 1 cut(s) | 343 |
| GsuI | CTGGAG | 1 cut(s) | 116 |
| HaeIII | GGCC | 3 cut(s) | 233, 276, 345 |
| HinfI | GANTC | 2 cut(s) | 103, 296 |
| HphI | GGTGA | 1 cut(s) | 175 |
| Hpy166II | GTNNAC | 3 cut(s) | 32, 98, 176 |
| Hpy188I | TCNGA | 3 cut(s) | 108, 259, 293 |
| Hpy8I | GTNNAC | 3 cut(s) | 32, 98, 176 |
| HpyAV | CCTTC | 2 cut(s) | 103, 160 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 205 |
| HpyF3I | CTNAG | 1 cut(s) | 338 |
| Kzo9I | GATC | 2 cut(s) | 58, 187 |
| LmnI | GCTCC | 1 cut(s) | 205 |
| LpnPI | CCDG | 4 cut(s) | 134, 146, 164, 288 |
| LweI | GCATC | 1 cut(s) | 217 |
| MaeI | CTAG | 1 cut(s) | 327 |
| MalI | GATC | 2 cut(s) | 60, 189 |
| MboI | GATC | 2 cut(s) | 58, 187 |
| MboII | GAAGA | 2 cut(s) | 326, 352 |
| MlsI | TGGCCA | 1 cut(s) | 276 |
| MluCI | AATT | 5 cut(s) | 8, 50, 118, 144, 306 |
| MluNI | TGGCCA | 1 cut(s) | 276 |
| MlyI | GAGTC | 1 cut(s) | 97 |
| MmeI | TCCRAC | 1 cut(s) | 298 |
| MnlI | CCTC | 5 cut(s) | 107, 140, 222, 314, 342 |
| Mox20I | TGGCCA | 1 cut(s) | 276 |
| MscI | TGGCCA | 1 cut(s) | 276 |
| MseI | TTAA | 3 cut(s) | 23, 48, 367 |
| Msp20I | TGGCCA | 1 cut(s) | 276 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 205 |
| NdeII | GATC | 2 cut(s) | 58, 187 |
| PfeI | GAWTC | 1 cut(s) | 296 |
| PkrI | GCNGC | 1 cut(s) | 344 |
| PleI | GAGTC | 1 cut(s) | 97 |
| PpsI | GAGTC | 1 cut(s) | 97 |
| PshBI | ATTAAT | 1 cut(s) | 23 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 22, 54 |
| RsaI | GTAC | 1 cut(s) | 177 |
| RsaNI | GTAC | 1 cut(s) | 176 |
| SaqAI | TTAA | 3 cut(s) | 23, 48, 367 |
| SatI | GCNGC | 1 cut(s) | 343 |
| Sau3AI | GATC | 2 cut(s) | 58, 187 |
| SchI | GAGTC | 1 cut(s) | 97 |
| SetI | ASST | 2 cut(s) | 40, 334 |
| SfaNI | GCATC | 1 cut(s) | 217 |
| Sse9I | AATT | 5 cut(s) | 8, 50, 118, 144, 306 |
| SsiI | CCGC | 2 cut(s) | 270, 342 |
| SspI | AATATT | 2 cut(s) | 21, 46 |
| SspMI | CTAG | 1 cut(s) | 327 |
| TasI | AATT | 5 cut(s) | 8, 50, 118, 144, 306 |
| TatI | WGTACW | 1 cut(s) | 175 |
| TauI | GCSGC | 1 cut(s) | 345 |
| TfiI | GAWTC | 1 cut(s) | 296 |
| Tru1I | TTAA | 3 cut(s) | 23, 48, 367 |
| Tru9I | TTAA | 3 cut(s) | 23, 48, 367 |
| TspDTI | ATGAA | 3 cut(s) | 56, 237, 301 |
| VspI | ATTAAT | 1 cut(s) | 23 |
| XapI | RAATTY | 3 cut(s) | 50, 144, 306 |
| XmiI | GTMKAC | 2 cut(s) | 31, 97 |
| XspI | CTAG | 1 cut(s) | 327 |