ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 251 |
| AcsI | RAATTY | 1 cut(s) | 12 |
| AfaI | GTAC | 3 cut(s) | 5, 69, 84 |
| AgsI | TTSAA | 1 cut(s) | 136 |
| AluBI | AGCT | 6 cut(s) | 29, 64, 156, 260, 274, 293 |
| AluI | AGCT | 6 cut(s) | 29, 64, 156, 260, 274, 293 |
| Alw21I | GWGCWC | 1 cut(s) | 285 |
| Alw26I | GTCTC | 2 cut(s) | 195, 259 |
| ApeKI | GCWGC | 2 cut(s) | 224, 290 |
| ApoI | RAATTY | 1 cut(s) | 12 |
| AsuHPI | GGTGA | 1 cut(s) | 134 |
| Bbv12I | GWGCWC | 1 cut(s) | 285 |
| BbvI | GCAGC | 1 cut(s) | 211 |
| BccI | CCATC | 2 cut(s) | 102, 143 |
| BcoDI | GTCTC | 2 cut(s) | 195, 259 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BfmI | CTRYAG | 3 cut(s) | 7, 78, 240 |
| BisI | GCNGC | 2 cut(s) | 225, 291 |
| BlsI | GCNGC | 2 cut(s) | 226, 292 |
| BmcAI | AGTACT | 1 cut(s) | 84 |
| BmsI | GCATC | 1 cut(s) | 83 |
| BpmI | CTGGAG | 1 cut(s) | 231 |
| BpuEI | CTTGAG | 2 cut(s) | 71, 269 |
| BsaI | GGTCTC | 2 cut(s) | 195, 259 |
| Bse1I | ACTGG | 1 cut(s) | 214 |
| BseGI | GGATG | 1 cut(s) | 194 |
| BseMII | CTCAG | 1 cut(s) | 270 |
| BseNI | ACTGG | 1 cut(s) | 214 |
| BseXI | GCAGC | 1 cut(s) | 211 |
| BsgI | GTGCAG | 1 cut(s) | 122 |
| BsiHKAI | GWGCWC | 1 cut(s) | 285 |
| BsmAI | GTCTC | 2 cut(s) | 195, 259 |
| Bso31I | GGTCTC | 2 cut(s) | 195, 259 |
| Bsp1286I | GDGCHC | 1 cut(s) | 285 |
| BspCNI | CTCAG | 1 cut(s) | 269 |
| BspTNI | GGTCTC | 2 cut(s) | 195, 259 |
| BsrI | ACTGG | 1 cut(s) | 214 |
| Bst4CI | ACNGT | 2 cut(s) | 82, 253 |
| BstDEI | CTNAG | 1 cut(s) | 256 |
| BstF5I | GGATG | 1 cut(s) | 194 |
| BstMAI | GTCTC | 2 cut(s) | 195, 259 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 221, 280 |
| BstSFI | CTRYAG | 3 cut(s) | 7, 78, 240 |
| BstV1I | GCAGC | 1 cut(s) | 211 |
| BtsCI | GGATG | 1 cut(s) | 194 |
| Csp6I | GTAC | 3 cut(s) | 4, 68, 83 |
| CviAII | CATG | 1 cut(s) | 266 |
| CviJI | RGCY | 8 cut(s) | 29, 49, 64, 156, 224, 260, 274, 293 |
| CviKI_1 | RGCY | 8 cut(s) | 29, 49, 64, 156, 224, 260, 274, 293 |
| CviQI | GTAC | 3 cut(s) | 4, 68, 83 |
| DdeI | CTNAG | 1 cut(s) | 256 |
| DraI | TTTAAA | 1 cut(s) | 160 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 251 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 251 |
| Eco31I | GGTCTC | 2 cut(s) | 195, 259 |
| FaeI | CATG | 1 cut(s) | 269 |
| FaiI | YATR | 8 cut(s) | 9, 26, 165, 173, 207, 242, 248, 267 |
| FatI | CATG | 1 cut(s) | 265 |
| Fnu4HI | GCNGC | 2 cut(s) | 225, 291 |
| FokI | GGATG | 1 cut(s) | 201 |
| Fsp4HI | GCNGC | 2 cut(s) | 225, 291 |
| FspBI | CTAG | 1 cut(s) | 86 |
| GluI | GCNGC | 2 cut(s) | 225, 291 |
| GsuI | CTGGAG | 1 cut(s) | 231 |
| Hin1II | CATG | 1 cut(s) | 269 |
| HindIII | AAGCTT | 1 cut(s) | 154 |
| HphI | GGTGA | 1 cut(s) | 134 |
| Hpy188I | TCNGA | 1 cut(s) | 200 |
| Hpy188III | TCNNGA | 1 cut(s) | 234 |
| HpyCH4III | ACNGT | 2 cut(s) | 82, 253 |
| HpyCH4V | TGCA | 1 cut(s) | 103 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 221, 280 |
| HpyF3I | CTNAG | 1 cut(s) | 256 |
| Hsp92II | CATG | 1 cut(s) | 269 |
| LmnI | GCTCC | 1 cut(s) | 212 |
| LpnPI | CCDG | 5 cut(s) | 50, 104, 195, 206, 263 |
| Lsp1109I | GCAGC | 1 cut(s) | 211 |
| LweI | GCATC | 1 cut(s) | 83 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MboII | GAAGA | 1 cut(s) | 68 |
| MhlI | GDGCHC | 1 cut(s) | 285 |
| MluCI | AATT | 1 cut(s) | 12 |
| MnlI | CCTC | 1 cut(s) | 46 |
| MseI | TTAA | 1 cut(s) | 159 |
| MslI | CAYNNNNRTG | 1 cut(s) | 43 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 221, 280 |
| NlaIII | CATG | 1 cut(s) | 269 |
| PkrI | GCNGC | 2 cut(s) | 226, 292 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 75, 107 |
| RsaI | GTAC | 3 cut(s) | 5, 69, 84 |
| RsaNI | GTAC | 3 cut(s) | 4, 68, 83 |
| RseI | CAYNNNNRTG | 1 cut(s) | 43 |
| SaqAI | TTAA | 1 cut(s) | 159 |
| SatI | GCNGC | 2 cut(s) | 225, 291 |
| ScaI | AGTACT | 1 cut(s) | 84 |
| SduI | GDGCHC | 1 cut(s) | 285 |
| SetI | ASST | 8 cut(s) | 31, 66, 158, 181, 241, 262, 276, 295 |
| SfaNI | GCATC | 1 cut(s) | 83 |
| SfcI | CTRYAG | 3 cut(s) | 7, 78, 240 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 43 |
| SmlI | CTYRAG | 2 cut(s) | 50, 284 |
| SmoI | CTYRAG | 2 cut(s) | 50, 284 |
| Sse9I | AATT | 1 cut(s) | 12 |
| SspI | AATATT | 1 cut(s) | 145 |
| SspMI | CTAG | 1 cut(s) | 86 |
| TaaI | ACNGT | 2 cut(s) | 82, 253 |
| TaqI | TCGA | 1 cut(s) | 235 |
| TasI | AATT | 1 cut(s) | 12 |
| TatI | WGTACW | 2 cut(s) | 3, 82 |
| Tru1I | TTAA | 1 cut(s) | 159 |
| Tru9I | TTAA | 1 cut(s) | 159 |
| TseI | GCWGC | 2 cut(s) | 224, 290 |
| TspDTI | ATGAA | 2 cut(s) | 180, 188 |
| XapI | RAATTY | 1 cut(s) | 12 |
| XspI | CTAG | 1 cut(s) | 86 |
| ZrmI | AGTACT | 1 cut(s) | 84 |