Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 149 |
| AccB1I | GGYRCC | 2 cut(s) | 149, 257 |
| AccI | GTMKAC | 1 cut(s) | 7 |
| AciI | CCGC | 1 cut(s) | 590 |
| AclWI | GGATC | 1 cut(s) | 572 |
| AfaI | GTAC | 2 cut(s) | 151, 691 |
| AgsI | TTSAA | 1 cut(s) | 316 |
| AluBI | AGCT | 8 cut(s) | 131, 212, 230, 422, 518, 538, 635, 683 |
| AluI | AGCT | 8 cut(s) | 131, 212, 230, 422, 518, 538, 635, 683 |
| AlwI | GGATC | 1 cut(s) | 572 |
| Ama87I | CYCGRG | 1 cut(s) | 675 |
| AoxI | GGCC | 1 cut(s) | 830 |
| ApeKI | GCWGC | 2 cut(s) | 422, 680 |
| Asp718I | GGTACC | 1 cut(s) | 149 |
| AspS9I | GGNCC | 1 cut(s) | 733 |
| AsuC2I | CCSGG | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 4 cut(s) | 185, 296, 719, 788 |
| AsuNHI | GCTAGC | 1 cut(s) | 67 |
| AvaI | CYCGRG | 1 cut(s) | 675 |
| AvaII | GGWCC | 1 cut(s) | 733 |
| AxyI | CCTNAGG | 1 cut(s) | 324 |
| BaeGI | GKGCMC | 1 cut(s) | 624 |
| BanI | GGYRCC | 2 cut(s) | 149, 257 |
| BbvI | GCAGC | 2 cut(s) | 409, 692 |
| BciVI | GTATCC | 1 cut(s) | 322 |
| BclI | TGATCA | 1 cut(s) | 750 |
| BcnI | CCSGG | 1 cut(s) | 101 |
| BfaI | CTAG | 2 cut(s) | 68, 531 |
| BfmI | CTRYAG | 2 cut(s) | 411, 790 |
| BfuI | GTATCC | 1 cut(s) | 322 |
| BisI | GCNGC | 3 cut(s) | 423, 590, 681 |
| BlsI | GCNGC | 3 cut(s) | 424, 591, 682 |
| BmcAI | AGTACT | 1 cut(s) | 691 |
| Bme1390I | CCNGG | 1 cut(s) | 101 |
| Bme18I | GGWCC | 1 cut(s) | 733 |
| BmeT110I | CYCGRG | 1 cut(s) | 675 |
| BmgT120I | GGNCC | 1 cut(s) | 733 |
| BmiI | GGNNCC | 2 cut(s) | 151, 259 |
| BmrFI | CCNGG | 1 cut(s) | 101 |
| BmrI | ACTGGG | 1 cut(s) | 618 |
| BmtI | GCTAGC | 1 cut(s) | 71 |
| BmuI | ACTGGG | 1 cut(s) | 618 |
| BpmI | CTGGAG | 1 cut(s) | 594 |
| BpuEI | CTTGAG | 1 cut(s) | 102 |
| BpuMI | CCSGG | 1 cut(s) | 101 |
| BsaJI | CCNNGG | 2 cut(s) | 145, 261 |
| Bse1I | ACTGG | 3 cut(s) | 259, 624, 709 |
| Bse21I | CCTNAGG | 1 cut(s) | 324 |
| BseDI | CCNNGG | 2 cut(s) | 145, 261 |
| BseMII | CTCAG | 1 cut(s) | 315 |
| BseNI | ACTGG | 3 cut(s) | 259, 624, 709 |
| BseRI | GAGGAG | 1 cut(s) | 291 |
| BseSI | GKGCMC | 1 cut(s) | 624 |
| BseXI | GCAGC | 2 cut(s) | 409, 692 |
| BshFI | GGCC | 1 cut(s) | 832 |
| BshNI | GGYRCC | 2 cut(s) | 149, 257 |
| BsiHKCI | CYCGRG | 1 cut(s) | 675 |
| BsiSI | CCGG | 2 cut(s) | 101, 829 |
| BsmI | GAATGC | 1 cut(s) | 616 |
| BsnI | GGCC | 1 cut(s) | 832 |
| BsoBI | CYCGRG | 1 cut(s) | 675 |
| Bsp1286I | GDGCHC | 1 cut(s) | 624 |
| Bsp143I | GATC | 4 cut(s) | 466, 577, 709, 750 |
| Bsp19I | CCATGG | 1 cut(s) | 145 |
| BspACI | CCGC | 1 cut(s) | 590 |
| BspANI | GGCC | 1 cut(s) | 832 |
| BspCNI | CTCAG | 1 cut(s) | 316 |
| BspLI | GGNNCC | 2 cut(s) | 151, 259 |
| BspMAI | CTGCAG | 1 cut(s) | 415 |
| BspOI | GCTAGC | 1 cut(s) | 71 |
| BspPI | GGATC | 1 cut(s) | 572 |
| BspT107I | GGYRCC | 2 cut(s) | 149, 257 |
| BsrI | ACTGG | 3 cut(s) | 259, 624, 709 |
| BssECI | CCNNGG | 2 cut(s) | 145, 261 |
| BssMI | GATC | 4 cut(s) | 466, 577, 709, 750 |
| BssT1I | CCWWGG | 2 cut(s) | 145, 261 |
| Bst4CI | ACNGT | 2 cut(s) | 554, 794 |
| Bst6I | CTCTTC | 1 cut(s) | 574 |
| BstC8I | GCNNGC | 2 cut(s) | 69, 655 |
| BstDEI | CTNAG | 2 cut(s) | 324, 446 |
| BstDSI | CCRYGG | 1 cut(s) | 145 |
| BstKTI | GATC | 4 cut(s) | 469, 580, 712, 753 |
| BstMBI | GATC | 4 cut(s) | 466, 577, 709, 750 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 73, 419 |
| BstNSI | RCATGY | 1 cut(s) | 50 |
| BstSCI | CCNGG | 1 cut(s) | 99 |
| BstSFI | CTRYAG | 2 cut(s) | 411, 790 |
| BstSLI | GKGCMC | 1 cut(s) | 624 |
| BstV1I | GCAGC | 2 cut(s) | 409, 692 |
| BstX2I | RGATCY | 1 cut(s) | 577 |
| BstYI | RGATCY | 1 cut(s) | 577 |
| Bsu36I | CCTNAGG | 1 cut(s) | 324 |
| BsuI | GTATCC | 1 cut(s) | 322 |
| BsuRI | GGCC | 1 cut(s) | 832 |
| BtgI | CCRYGG | 1 cut(s) | 145 |
| BtsI | GCAGTG | 1 cut(s) | 159 |
| BtsIMutI | CAGTG | 3 cut(s) | 159, 462, 702 |
| Cac8I | GCNNGC | 2 cut(s) | 69, 655 |
| Cfr13I | GGNCC | 1 cut(s) | 733 |
| Csp6I | GTAC | 2 cut(s) | 150, 690 |
| CviAII | CATG | 6 cut(s) | 47, 64, 146, 372, 477, 754 |
| CviQI | GTAC | 2 cut(s) | 150, 690 |
| DdeI | CTNAG | 2 cut(s) | 324, 446 |
| DpnI | GATC | 4 cut(s) | 468, 579, 711, 752 |
| DpnII | GATC | 4 cut(s) | 466, 577, 709, 750 |
| Eam1104I | CTCTTC | 1 cut(s) | 574 |
| EarI | CTCTTC | 1 cut(s) | 574 |
| Eco130I | CCWWGG | 2 cut(s) | 145, 261 |
| Eco32I | GATATC | 1 cut(s) | 93 |
| Eco47I | GGWCC | 1 cut(s) | 733 |
| Eco81I | CCTNAGG | 1 cut(s) | 324 |
| Eco88I | CYCGRG | 1 cut(s) | 675 |
| EcoRV | GATATC | 1 cut(s) | 93 |
| EcoT14I | CCWWGG | 2 cut(s) | 145, 261 |
| ErhI | CCWWGG | 2 cut(s) | 145, 261 |
| FaeI | CATG | 6 cut(s) | 50, 67, 149, 375, 480, 757 |
| FatI | CATG | 6 cut(s) | 46, 63, 145, 371, 476, 753 |
| FbaI | TGATCA | 1 cut(s) | 750 |
| FblI | GTMKAC | 1 cut(s) | 7 |
| Fnu4HI | GCNGC | 3 cut(s) | 423, 590, 681 |
| Fsp4HI | GCNGC | 3 cut(s) | 423, 590, 681 |
| FspBI | CTAG | 2 cut(s) | 68, 531 |
| GluI | GCNGC | 3 cut(s) | 423, 590, 681 |
| GsuI | CTGGAG | 1 cut(s) | 594 |
| HaeIII | GGCC | 1 cut(s) | 832 |
| HapII | CCGG | 2 cut(s) | 101, 829 |
| Hin1II | CATG | 6 cut(s) | 50, 67, 149, 375, 480, 757 |
| HinfI | GANTC | 4 cut(s) | 104, 289, 673, 742 |
| HpaII | CCGG | 2 cut(s) | 101, 829 |
| HphI | GGTGA | 4 cut(s) | 185, 296, 719, 788 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 136 |
| Hpy188I | TCNGA | 1 cut(s) | 672 |
| Hpy188III | TCNNGA | 1 cut(s) | 573 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 136 |
| HpyAV | CCTTC | 2 cut(s) | 14, 592 |
| HpyCH4III | ACNGT | 2 cut(s) | 554, 794 |
| HpyCH4IV | ACGT | 1 cut(s) | 454 |
| HpyCH4V | TGCA | 4 cut(s) | 375, 413, 476, 715 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 73, 419 |
| HpyF3I | CTNAG | 2 cut(s) | 324, 446 |
| HpySE526I | ACGT | 1 cut(s) | 454 |
| Hsp92II | CATG | 6 cut(s) | 50, 67, 149, 375, 480, 757 |
| KpnI | GGTACC | 1 cut(s) | 153 |
| Ksp22I | TGATCA | 1 cut(s) | 750 |
| Kzo9I | GATC | 4 cut(s) | 466, 577, 709, 750 |
| LmnI | GCTCC | 1 cut(s) | 535 |
| LpnPI | CCDG | 9 cut(s) | 62, 114, 216, 240, 336, 423, 558, 637, 690 |
| Lsp1109I | GCAGC | 2 cut(s) | 409, 692 |
| MaeI | CTAG | 2 cut(s) | 68, 531 |
| MaeII | ACGT | 1 cut(s) | 454 |
| MaeIII | GTNAC | 3 cut(s) | 173, 698, 794 |
| MalI | GATC | 4 cut(s) | 468, 579, 711, 752 |
| MboI | GATC | 4 cut(s) | 466, 577, 709, 750 |
| MboII | GAAGA | 2 cut(s) | 29, 561 |
| MfeI | CAATTG | 1 cut(s) | 376 |
| MflI | RGATCY | 1 cut(s) | 577 |
| MhlI | GDGCHC | 1 cut(s) | 624 |
| MluCI | AATT | 5 cut(s) | 246, 283, 367, 376, 809 |
| MlyI | GAGTC | 3 cut(s) | 98, 667, 751 |
| MmeI | TCCRAC | 4 cut(s) | 62, 120, 626, 695 |
| MseI | TTAA | 3 cut(s) | 36, 459, 686 |
| MslI | CAYNNNNRTG | 1 cut(s) | 45 |
| MspI | CCGG | 2 cut(s) | 101, 829 |
| MspR9I | CCNGG | 1 cut(s) | 101 |
| MunI | CAATTG | 1 cut(s) | 376 |
| Mva1269I | GAATGC | 1 cut(s) | 616 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 73, 419 |
| NciI | CCSGG | 1 cut(s) | 101 |
| NcoI | CCATGG | 1 cut(s) | 145 |
| NdeII | GATC | 4 cut(s) | 466, 577, 709, 750 |
| NheI | GCTAGC | 1 cut(s) | 67 |
| NlaIII | CATG | 6 cut(s) | 50, 67, 149, 375, 480, 757 |
| NlaIV | GGNNCC | 2 cut(s) | 151, 259 |
| NmuCI | GTSAC | 2 cut(s) | 173, 794 |
| NspI | RCATGY | 1 cut(s) | 50 |
| PaeR7I | CTCGAG | 1 cut(s) | 675 |
| PctI | GAATGC | 1 cut(s) | 616 |
| PfeI | GAWTC | 1 cut(s) | 289 |
| PkrI | GCNGC | 3 cut(s) | 424, 591, 682 |
| PleI | GAGTC | 3 cut(s) | 98, 667, 750 |
| PpsI | GAGTC | 3 cut(s) | 98, 667, 750 |
| PspN4I | GGNNCC | 2 cut(s) | 151, 259 |
| PspPI | GGNCC | 1 cut(s) | 733 |
| PspXI | VCTCGAGB | 1 cut(s) | 675 |
| PstI | CTGCAG | 1 cut(s) | 415 |
| PsuI | RGATCY | 1 cut(s) | 577 |
| RsaI | GTAC | 2 cut(s) | 151, 691 |
| RsaNI | GTAC | 2 cut(s) | 150, 690 |
| RseI | CAYNNNNRTG | 1 cut(s) | 45 |
| SaqAI | TTAA | 3 cut(s) | 36, 459, 686 |
| SatI | GCNGC | 3 cut(s) | 423, 590, 681 |
| Sau3AI | GATC | 4 cut(s) | 466, 577, 709, 750 |
| Sau96I | GGNCC | 1 cut(s) | 733 |
| ScaI | AGTACT | 1 cut(s) | 691 |
| SchI | GAGTC | 3 cut(s) | 98, 667, 751 |
| ScrFI | CCNGG | 1 cut(s) | 101 |
| SduI | GDGCHC | 1 cut(s) | 624 |
| SfcI | CTRYAG | 2 cut(s) | 411, 790 |
| Sfr274I | CTCGAG | 1 cut(s) | 675 |
| SinI | GGWCC | 1 cut(s) | 733 |
| SlaI | CTCGAG | 1 cut(s) | 675 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 45 |
| SmlI | CTYRAG | 2 cut(s) | 117, 675 |
| SmoI | CTYRAG | 2 cut(s) | 117, 675 |
| Sse9I | AATT | 5 cut(s) | 246, 283, 367, 376, 809 |
| SsiI | CCGC | 1 cut(s) | 590 |
| SspMI | CTAG | 2 cut(s) | 68, 531 |
| StyD4I | CCNGG | 1 cut(s) | 99 |
| StyI | CCWWGG | 2 cut(s) | 145, 261 |
| TaaI | ACNGT | 2 cut(s) | 554, 794 |
| TaiI | ACGT | 1 cut(s) | 457 |
| TaqI | TCGA | 2 cut(s) | 360, 676 |
| TaqII | GACCGA | 1 cut(s) | 721 |
| TasI | AATT | 5 cut(s) | 246, 283, 367, 376, 809 |
| TatI | WGTACW | 1 cut(s) | 689 |
| TauI | GCSGC | 1 cut(s) | 592 |
| TfiI | GAWTC | 1 cut(s) | 289 |
| Tru1I | TTAA | 3 cut(s) | 36, 459, 686 |
| Tru9I | TTAA | 3 cut(s) | 36, 459, 686 |
| TscAI | CASTG | 3 cut(s) | 166, 469, 709 |
| TseFI | GTSAC | 2 cut(s) | 173, 794 |
| TseI | GCWGC | 2 cut(s) | 422, 680 |
| Tsp45I | GTSAC | 2 cut(s) | 173, 794 |
| TspDTI | ATGAA | 3 cut(s) | 44, 360, 386 |
| TspRI | CASTG | 3 cut(s) | 166, 469, 709 |
| VpaK11BI | GGWCC | 1 cut(s) | 733 |
| XceI | RCATGY | 1 cut(s) | 50 |
| XhoI | CTCGAG | 1 cut(s) | 675 |
| XmiI | GTMKAC | 1 cut(s) | 7 |
| XspI | CTAG | 2 cut(s) | 68, 531 |
| ZrmI | AGTACT | 1 cut(s) | 691 |