Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 358, 602 |
| AcuI | CTGAAG | 1 cut(s) | 76 |
| AfaI | GTAC | 2 cut(s) | 45, 280 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 382, 396, 434 |
| AgsI | TTSAA | 1 cut(s) | 184 |
| AjnI | CCWGG | 1 cut(s) | 427 |
| AleI | CACNNNNGTG | 1 cut(s) | 550 |
| Alw21I | GWGCWC | 1 cut(s) | 17 |
| Alw26I | GTCTC | 1 cut(s) | 88 |
| Alw44I | GTGCAC | 1 cut(s) | 13 |
| ApaLI | GTGCAC | 1 cut(s) | 13 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 118 |
| AsuHPI | GGTGA | 2 cut(s) | 356, 401 |
| BaeGI | GKGCMC | 1 cut(s) | 17 |
| BbsI | GAAGAC | 1 cut(s) | 180 |
| Bbv12I | GWGCWC | 1 cut(s) | 17 |
| BccI | CCATC | 3 cut(s) | 262, 288, 664 |
| BciT130I | CCWGG | 1 cut(s) | 429 |
| BciVI | GTATCC | 1 cut(s) | 354 |
| BcoDI | GTCTC | 1 cut(s) | 88 |
| BfaI | CTAG | 5 cut(s) | 111, 380, 444, 540, 687 |
| BfuI | GTATCC | 1 cut(s) | 354 |
| Bme1390I | CCNGG | 1 cut(s) | 429 |
| BmrFI | CCNGG | 1 cut(s) | 429 |
| BpiI | GAAGAC | 1 cut(s) | 180 |
| BsaJI | CCNNGG | 1 cut(s) | 350 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 256, 286 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 382, 396, 434 |
| Bse1I | ACTGG | 1 cut(s) | 254 |
| BseBI | CCWGG | 1 cut(s) | 429 |
| BseDI | CCNNGG | 1 cut(s) | 350 |
| BseGI | GGATG | 2 cut(s) | 273, 620 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 382, 396, 434 |
| BseNI | ACTGG | 1 cut(s) | 254 |
| BseRI | GAGGAG | 1 cut(s) | 518 |
| BseSI | GKGCMC | 1 cut(s) | 17 |
| BseYI | CCCAGC | 1 cut(s) | 578 |
| BsiHKAI | GWGCWC | 1 cut(s) | 17 |
| BsiSI | CCGG | 1 cut(s) | 390 |
| BslFI | GGGAC | 1 cut(s) | 19 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 382, 396, 434 |
| BsmAI | GTCTC | 1 cut(s) | 88 |
| BsmBI | CGTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 1 cut(s) | 19 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| BspACI | CCGC | 2 cut(s) | 358, 602 |
| BspHI | TCATGA | 1 cut(s) | 630 |
| BsrI | ACTGG | 1 cut(s) | 254 |
| BssECI | CCNNGG | 1 cut(s) | 350 |
| BssT1I | CCWWGG | 1 cut(s) | 350 |
| Bst2UI | CCWGG | 1 cut(s) | 429 |
| Bst4CI | ACNGT | 1 cut(s) | 319 |
| BstDEI | CTNAG | 1 cut(s) | 569 |
| BstF5I | GGATG | 2 cut(s) | 273, 620 |
| BstMAI | GTCTC | 1 cut(s) | 88 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 155 |
| BstNI | CCWGG | 1 cut(s) | 429 |
| BstSCI | CCNGG | 1 cut(s) | 427 |
| BstSLI | GKGCMC | 1 cut(s) | 17 |
| BstV2I | GAAGAC | 1 cut(s) | 180 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 261 |
| BsuI | GTATCC | 1 cut(s) | 354 |
| BtsCI | GGATG | 2 cut(s) | 273, 620 |
| CciI | TCATGA | 1 cut(s) | 630 |
| Csp6I | GTAC | 2 cut(s) | 44, 279 |
| CviAII | CATG | 2 cut(s) | 458, 631 |
| CviJI | RGCY | 5 cut(s) | 132, 475, 509, 539, 686 |
| CviKI_1 | RGCY | 5 cut(s) | 132, 475, 509, 539, 686 |
| CviQI | GTAC | 2 cut(s) | 44, 279 |
| DdeI | CTNAG | 1 cut(s) | 569 |
| EciI | GGCGGA | 1 cut(s) | 373 |
| Eco130I | CCWWGG | 1 cut(s) | 350 |
| Eco57I | CTGAAG | 1 cut(s) | 76 |
| EcoRII | CCWGG | 1 cut(s) | 427 |
| EcoT14I | CCWWGG | 1 cut(s) | 350 |
| ErhI | CCWWGG | 1 cut(s) | 350 |
| Esp3I | CGTCTC | 1 cut(s) | 88 |
| FaeI | CATG | 2 cut(s) | 461, 634 |
| FaiI | YATR | 9 cut(s) | 41, 129, 242, 302, 459, 627, 632, 657, 659 |
| FaqI | GGGAC | 1 cut(s) | 19 |
| FatI | CATG | 2 cut(s) | 457, 630 |
| FauNDI | CATATG | 1 cut(s) | 657 |
| FokI | GGATG | 2 cut(s) | 280, 607 |
| FspBI | CTAG | 5 cut(s) | 111, 380, 444, 540, 687 |
| GsaI | CCCAGC | 1 cut(s) | 582 |
| HapII | CCGG | 1 cut(s) | 390 |
| Hin1II | CATG | 2 cut(s) | 461, 634 |
| HinfI | GANTC | 4 cut(s) | 214, 386, 400, 646 |
| HpaII | CCGG | 1 cut(s) | 390 |
| HphI | GGTGA | 2 cut(s) | 356, 401 |
| Hpy166II | GTNNAC | 3 cut(s) | 15, 76, 347 |
| Hpy188I | TCNGA | 4 cut(s) | 95, 172, 219, 293 |
| Hpy188III | TCNNGA | 6 cut(s) | 66, 101, 111, 184, 380, 631 |
| Hpy8I | GTNNAC | 3 cut(s) | 15, 76, 347 |
| Hpy99I | CGWCG | 1 cut(s) | 83 |
| HpyAV | CCTTC | 7 cut(s) | 13, 100, 136, 340, 382, 523, 577 |
| HpyCH4III | ACNGT | 1 cut(s) | 319 |
| HpyCH4IV | ACGT | 1 cut(s) | 78 |
| HpyCH4V | TGCA | 2 cut(s) | 15, 608 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 155 |
| HpyF3I | CTNAG | 1 cut(s) | 569 |
| HpySE526I | ACGT | 1 cut(s) | 78 |
| Hsp92II | CATG | 2 cut(s) | 461, 634 |
| LpnPI | CCDG | 9 cut(s) | 51, 114, 163, 221, 267, 403, 414, 441, 564 |
| MaeI | CTAG | 5 cut(s) | 111, 380, 444, 540, 687 |
| MaeII | ACGT | 1 cut(s) | 78 |
| MaeIII | GTNAC | 2 cut(s) | 57, 491 |
| MboII | GAAGA | 2 cut(s) | 61, 185 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MluCI | AATT | 3 cut(s) | 118, 248, 615 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| MmeI | TCCRAC | 2 cut(s) | 12, 503 |
| MnlI | CCTC | 8 cut(s) | 28, 139, 258, 376, 379, 387, 496, 499 |
| MroXI | GAANNNNTTC | 1 cut(s) | 118 |
| MseI | TTAA | 6 cut(s) | 192, 225, 522, 597, 680, 706 |
| MslI | CAYNNNNRTG | 1 cut(s) | 550 |
| MspI | CCGG | 1 cut(s) | 390 |
| MspR9I | CCNGG | 1 cut(s) | 429 |
| MvaI | CCWGG | 1 cut(s) | 429 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 155 |
| NdeI | CATATG | 1 cut(s) | 657 |
| NlaIII | CATG | 2 cut(s) | 461, 634 |
| OliI | CACNNNNGTG | 1 cut(s) | 550 |
| PagI | TCATGA | 1 cut(s) | 630 |
| PdmI | GAANNNNTTC | 1 cut(s) | 118 |
| PfeI | GAWTC | 3 cut(s) | 214, 400, 646 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| Psp6I | CCWGG | 1 cut(s) | 427 |
| PspFI | CCCAGC | 1 cut(s) | 578 |
| PspGI | CCWGG | 1 cut(s) | 427 |
| RsaI | GTAC | 2 cut(s) | 45, 280 |
| RsaNI | GTAC | 2 cut(s) | 44, 279 |
| RseI | CAYNNNNRTG | 1 cut(s) | 550 |
| SaqAI | TTAA | 6 cut(s) | 192, 225, 522, 597, 680, 706 |
| SchI | GAGTC | 1 cut(s) | 380 |
| ScrFI | CCNGG | 1 cut(s) | 429 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 7 cut(s) | 81, 92, 182, 203, 352, 419, 534 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 550 |
| Sse9I | AATT | 3 cut(s) | 118, 248, 615 |
| SsiI | CCGC | 2 cut(s) | 358, 602 |
| SspI | AATATT | 1 cut(s) | 107 |
| SspMI | CTAG | 5 cut(s) | 111, 380, 444, 540, 687 |
| StyD4I | CCNGG | 1 cut(s) | 427 |
| StyI | CCWWGG | 1 cut(s) | 350 |
| TaaI | ACNGT | 1 cut(s) | 319 |
| TaiI | ACGT | 1 cut(s) | 81 |
| TasI | AATT | 3 cut(s) | 118, 248, 615 |
| TatI | WGTACW | 2 cut(s) | 43, 278 |
| TfiI | GAWTC | 3 cut(s) | 214, 400, 646 |
| Tru1I | TTAA | 6 cut(s) | 192, 225, 522, 597, 680, 706 |
| Tru9I | TTAA | 6 cut(s) | 192, 225, 522, 597, 680, 706 |
| TspDTI | ATGAA | 3 cut(s) | 151, 322, 609 |
| VneI | GTGCAC | 1 cut(s) | 13 |
| XbaI | TCTAGA | 2 cut(s) | 110, 379 |
| XmnI | GAANNNNTTC | 1 cut(s) | 118 |
| XspI | CTAG | 5 cut(s) | 111, 380, 444, 540, 687 |