Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 29 |
| AfaI | GTAC | 2 cut(s) | 169, 259 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 29, 360 |
| AflIII | ACRYGT | 1 cut(s) | 174 |
| AjiI | CACGTC | 1 cut(s) | 177 |
| AluBI | AGCT | 2 cut(s) | 332, 359 |
| AluI | AGCT | 2 cut(s) | 332, 359 |
| Alw26I | GTCTC | 2 cut(s) | 116, 308 |
| AoxI | GGCC | 2 cut(s) | 63, 362 |
| ApeKI | GCWGC | 1 cut(s) | 287 |
| AspA2I | CCTAGG | 1 cut(s) | 365 |
| AsuHPI | GGTGA | 1 cut(s) | 33 |
| AvrII | CCTAGG | 1 cut(s) | 365 |
| BbvCI | CCTCAGC | 1 cut(s) | 54 |
| BbvI | GCAGC | 1 cut(s) | 299 |
| BclI | TGATCA | 1 cut(s) | 153 |
| BcoDI | GTCTC | 2 cut(s) | 116, 308 |
| BfaI | CTAG | 2 cut(s) | 360, 366 |
| BfmI | CTRYAG | 1 cut(s) | 67 |
| BisI | GCNGC | 1 cut(s) | 288 |
| BlnI | CCTAGG | 1 cut(s) | 365 |
| BlsI | GCNGC | 1 cut(s) | 289 |
| BmcAI | AGTACT | 1 cut(s) | 169 |
| BmgBI | CACGTC | 1 cut(s) | 177 |
| BmsI | GCATC | 1 cut(s) | 340 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 113, 145 |
| Bpu10I | CCTNAGC | 2 cut(s) | 54, 355 |
| BsaJI | CCNNGG | 1 cut(s) | 365 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 29, 360 |
| Bse1I | ACTGG | 1 cut(s) | 110 |
| Bse3DI | GCAATG | 2 cut(s) | 23, 84 |
| BseDI | CCNNGG | 1 cut(s) | 365 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 29, 360 |
| BseMI | GCAATG | 2 cut(s) | 23, 84 |
| BseMII | CTCAG | 2 cut(s) | 45, 303 |
| BseNI | ACTGG | 1 cut(s) | 110 |
| BseXI | GCAGC | 1 cut(s) | 299 |
| BshFI | GGCC | 2 cut(s) | 65, 364 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 29, 360 |
| BsmAI | GTCTC | 2 cut(s) | 116, 308 |
| BsnI | GGCC | 2 cut(s) | 65, 364 |
| Bsp143I | GATC | 1 cut(s) | 153 |
| BspANI | GGCC | 2 cut(s) | 65, 364 |
| BspCNI | CTCAG | 2 cut(s) | 46, 304 |
| BsrDI | GCAATG | 2 cut(s) | 23, 84 |
| BsrI | ACTGG | 1 cut(s) | 110 |
| BssECI | CCNNGG | 1 cut(s) | 365 |
| BssMI | GATC | 1 cut(s) | 153 |
| BssT1I | CCWWGG | 1 cut(s) | 365 |
| Bst4CI | ACNGT | 1 cut(s) | 135 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 34 |
| BstC8I | GCNNGC | 3 cut(s) | 35, 51, 75 |
| BstDEI | CTNAG | 4 cut(s) | 54, 312, 355, 372 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 358 |
| BstKTI | GATC | 1 cut(s) | 156 |
| BstMAI | GTCTC | 2 cut(s) | 116, 308 |
| BstMBI | GATC | 1 cut(s) | 153 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 34 |
| BstNSI | RCATGY | 2 cut(s) | 37, 53 |
| BstSFI | CTRYAG | 1 cut(s) | 67 |
| BstV1I | GCAGC | 1 cut(s) | 299 |
| BsuRI | GGCC | 2 cut(s) | 65, 364 |
| BtrI | CACGTC | 1 cut(s) | 177 |
| BtsI | GCAGTG | 1 cut(s) | 96 |
| BtsIMutI | CAGTG | 2 cut(s) | 96, 117 |
| Cac8I | GCNNGC | 3 cut(s) | 35, 51, 75 |
| Csp6I | GTAC | 2 cut(s) | 168, 258 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 252, 287 |
| CviAII | CATG | 3 cut(s) | 29, 34, 50 |
| CviJI | RGCY | 6 cut(s) | 65, 224, 275, 332, 359, 364 |
| CviKI_1 | RGCY | 6 cut(s) | 65, 224, 275, 332, 359, 364 |
| CviQI | GTAC | 2 cut(s) | 168, 258 |
| DdeI | CTNAG | 4 cut(s) | 54, 312, 355, 372 |
| DpnI | GATC | 1 cut(s) | 155 |
| DpnII | GATC | 1 cut(s) | 153 |
| Eco130I | CCWWGG | 1 cut(s) | 365 |
| Eco147I | AGGCCT | 1 cut(s) | 364 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 358 |
| EcoT14I | CCWWGG | 1 cut(s) | 365 |
| ErhI | CCWWGG | 1 cut(s) | 365 |
| FaeI | CATG | 3 cut(s) | 32, 37, 53 |
| FaiI | YATR | 6 cut(s) | 30, 35, 51, 198, 249, 284 |
| FatI | CATG | 3 cut(s) | 28, 33, 49 |
| FbaI | TGATCA | 1 cut(s) | 153 |
| Fnu4HI | GCNGC | 1 cut(s) | 288 |
| Fsp4HI | GCNGC | 1 cut(s) | 288 |
| FspBI | CTAG | 2 cut(s) | 360, 366 |
| GluI | GCNGC | 1 cut(s) | 288 |
| HaeIII | GGCC | 2 cut(s) | 65, 364 |
| Hin1II | CATG | 3 cut(s) | 32, 37, 53 |
| HinfI | GANTC | 1 cut(s) | 128 |
| HphI | GGTGA | 1 cut(s) | 33 |
| Hpy188I | TCNGA | 1 cut(s) | 313 |
| HpyAV | CCTTC | 1 cut(s) | 346 |
| HpyCH4III | ACNGT | 1 cut(s) | 135 |
| HpyCH4IV | ACGT | 2 cut(s) | 176, 256 |
| HpyCH4V | TGCA | 3 cut(s) | 28, 89, 263 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 34 |
| HpyF3I | CTNAG | 4 cut(s) | 54, 312, 355, 372 |
| HpySE526I | ACGT | 2 cut(s) | 176, 256 |
| Hsp92II | CATG | 3 cut(s) | 32, 37, 53 |
| Ksp22I | TGATCA | 1 cut(s) | 153 |
| Kzo9I | GATC | 1 cut(s) | 153 |
| LmnI | GCTCC | 1 cut(s) | 337 |
| LpnPI | CCDG | 4 cut(s) | 57, 59, 79, 123 |
| Lsp1109I | GCAGC | 1 cut(s) | 299 |
| LweI | GCATC | 1 cut(s) | 340 |
| MaeI | CTAG | 2 cut(s) | 360, 366 |
| MaeII | ACGT | 2 cut(s) | 176, 256 |
| MalI | GATC | 1 cut(s) | 155 |
| MboI | GATC | 1 cut(s) | 153 |
| MboII | GAAGA | 1 cut(s) | 212 |
| MlyI | GAGTC | 1 cut(s) | 122 |
| MnlI | CCTC | 3 cut(s) | 49, 138, 214 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 34 |
| NdeII | GATC | 1 cut(s) | 153 |
| NlaIII | CATG | 3 cut(s) | 32, 37, 53 |
| NspI | RCATGY | 2 cut(s) | 37, 53 |
| PaeI | GCATGC | 2 cut(s) | 37, 53 |
| PceI | AGGCCT | 1 cut(s) | 364 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 29 |
| PkrI | GCNGC | 1 cut(s) | 289 |
| PleI | GAGTC | 1 cut(s) | 122 |
| PpsI | GAGTC | 1 cut(s) | 122 |
| RsaI | GTAC | 2 cut(s) | 169, 259 |
| RsaNI | GTAC | 2 cut(s) | 168, 258 |
| SatI | GCNGC | 1 cut(s) | 288 |
| Sau3AI | GATC | 1 cut(s) | 153 |
| ScaI | AGTACT | 1 cut(s) | 169 |
| SchI | GAGTC | 1 cut(s) | 122 |
| SetI | ASST | 5 cut(s) | 60, 179, 259, 334, 361 |
| SfaNI | GCATC | 1 cut(s) | 340 |
| SfcI | CTRYAG | 1 cut(s) | 67 |
| SphI | GCATGC | 2 cut(s) | 37, 53 |
| SseBI | AGGCCT | 1 cut(s) | 364 |
| SspI | AATATT | 1 cut(s) | 235 |
| SspMI | CTAG | 2 cut(s) | 360, 366 |
| StuI | AGGCCT | 1 cut(s) | 364 |
| StyI | CCWWGG | 1 cut(s) | 365 |
| TaaI | ACNGT | 1 cut(s) | 135 |
| TaiI | ACGT | 2 cut(s) | 179, 259 |
| TatI | WGTACW | 1 cut(s) | 167 |
| TscAI | CASTG | 2 cut(s) | 96, 117 |
| TseI | GCWGC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 3 cut(s) | 213, 236, 291 |
| TspRI | CASTG | 2 cut(s) | 96, 117 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 29 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 358 |
| XceI | RCATGY | 2 cut(s) | 37, 53 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 238 |
| XmaJI | CCTAGG | 1 cut(s) | 365 |
| XspI | CTAG | 2 cut(s) | 360, 366 |
| ZrmI | AGTACT | 1 cut(s) | 169 |