Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 258 |
| AccI | GTMKAC | 1 cut(s) | 346 |
| AciI | CCGC | 1 cut(s) | 296 |
| AfaI | GTAC | 1 cut(s) | 369 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 324 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 285, 317 |
| AluBI | AGCT | 2 cut(s) | 41, 123 |
| AluI | AGCT | 2 cut(s) | 41, 123 |
| Alw26I | GTCTC | 2 cut(s) | 81, 211 |
| AspS9I | GGNCC | 1 cut(s) | 352 |
| AsuHPI | GGTGA | 4 cut(s) | 50, 302, 317, 395 |
| AvaII | GGWCC | 1 cut(s) | 352 |
| BccI | CCATC | 1 cut(s) | 380 |
| BclI | TGATCA | 1 cut(s) | 307 |
| BcoDI | GTCTC | 2 cut(s) | 81, 211 |
| BfaI | CTAG | 1 cut(s) | 191 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 200 |
| Bme18I | GGWCC | 1 cut(s) | 352 |
| BmgT120I | GGNCC | 1 cut(s) | 352 |
| BpmI | CTGGAG | 1 cut(s) | 235 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 324 |
| Bse1I | ACTGG | 2 cut(s) | 354, 367 |
| Bse3DI | GCAATG | 1 cut(s) | 21 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BseMI | GCAATG | 1 cut(s) | 21 |
| BseMII | CTCAG | 1 cut(s) | 407 |
| BseNI | ACTGG | 2 cut(s) | 354, 367 |
| BseYI | CCCAGC | 1 cut(s) | 123 |
| BsgI | GTGCAG | 1 cut(s) | 231 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 324 |
| BsmAI | GTCTC | 2 cut(s) | 81, 211 |
| BsmBI | CGTCTC | 1 cut(s) | 81 |
| BsmI | GAATGC | 1 cut(s) | 333 |
| Bsp1407I | TGTACA | 1 cut(s) | 367 |
| Bsp143I | GATC | 1 cut(s) | 307 |
| BspACI | CCGC | 1 cut(s) | 296 |
| BspCNI | CTCAG | 1 cut(s) | 406 |
| BsrDI | GCAATG | 1 cut(s) | 21 |
| BsrGI | TGTACA | 1 cut(s) | 367 |
| BsrI | ACTGG | 2 cut(s) | 354, 367 |
| BssMI | GATC | 1 cut(s) | 307 |
| BstAUI | TGTACA | 1 cut(s) | 367 |
| BstDEI | CTNAG | 1 cut(s) | 393 |
| BstKTI | GATC | 1 cut(s) | 310 |
| BstMAI | GTCTC | 2 cut(s) | 81, 211 |
| BstMBI | GATC | 1 cut(s) | 307 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 200 |
| BtsI | GCAGTG | 2 cut(s) | 243, 277 |
| BtsIMutI | CAGTG | 2 cut(s) | 243, 277 |
| Cfr13I | GGNCC | 1 cut(s) | 352 |
| Csp6I | GTAC | 1 cut(s) | 368 |
| CviAII | CATG | 1 cut(s) | 196 |
| CviJI | RGCY | 6 cut(s) | 41, 123, 165, 194, 213, 390 |
| CviKI_1 | RGCY | 6 cut(s) | 41, 123, 165, 194, 213, 390 |
| CviQI | GTAC | 1 cut(s) | 368 |
| DdeI | CTNAG | 1 cut(s) | 393 |
| DpnI | GATC | 1 cut(s) | 309 |
| DpnII | GATC | 1 cut(s) | 307 |
| DraI | TTTAAA | 1 cut(s) | 169 |
| Eco47I | GGWCC | 1 cut(s) | 352 |
| Esp3I | CGTCTC | 1 cut(s) | 81 |
| FaeI | CATG | 1 cut(s) | 199 |
| FaiI | YATR | 6 cut(s) | 10, 12, 46, 180, 197, 258 |
| FatI | CATG | 1 cut(s) | 195 |
| FbaI | TGATCA | 1 cut(s) | 307 |
| FblI | GTMKAC | 1 cut(s) | 346 |
| FspBI | CTAG | 1 cut(s) | 191 |
| GsaI | CCCAGC | 1 cut(s) | 127 |
| GsuI | CTGGAG | 1 cut(s) | 235 |
| Hin1II | CATG | 1 cut(s) | 199 |
| HphI | GGTGA | 4 cut(s) | 50, 302, 317, 395 |
| Hpy166II | GTNNAC | 2 cut(s) | 347, 368 |
| Hpy188I | TCNGA | 1 cut(s) | 407 |
| Hpy8I | GTNNAC | 2 cut(s) | 347, 368 |
| HpyAV | CCTTC | 1 cut(s) | 328 |
| HpyCH4V | TGCA | 2 cut(s) | 14, 248 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 200 |
| HpyF3I | CTNAG | 1 cut(s) | 393 |
| Hsp92II | CATG | 1 cut(s) | 199 |
| Ksp22I | TGATCA | 1 cut(s) | 307 |
| Kzo9I | GATC | 1 cut(s) | 307 |
| LpnPI | CCDG | 6 cut(s) | 109, 134, 199, 335, 348, 380 |
| MaeI | CTAG | 1 cut(s) | 191 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 309 |
| MboI | GATC | 1 cut(s) | 307 |
| MboII | GAAGA | 1 cut(s) | 115 |
| MluCI | AATT | 1 cut(s) | 19 |
| MnlI | CCTC | 6 cut(s) | 145, 149, 243, 251, 285, 325 |
| MseI | TTAA | 4 cut(s) | 140, 168, 225, 339 |
| Mva1269I | GAATGC | 1 cut(s) | 333 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 200 |
| NdeII | GATC | 1 cut(s) | 307 |
| NlaIII | CATG | 1 cut(s) | 199 |
| NmuCI | GTSAC | 1 cut(s) | 47 |
| PctI | GAATGC | 1 cut(s) | 333 |
| PsiI | TTATAA | 1 cut(s) | 258 |
| PspFI | CCCAGC | 1 cut(s) | 123 |
| PspPI | GGNCC | 1 cut(s) | 352 |
| RsaI | GTAC | 1 cut(s) | 369 |
| RsaNI | GTAC | 1 cut(s) | 368 |
| SaqAI | TTAA | 4 cut(s) | 140, 168, 225, 339 |
| Sau3AI | GATC | 1 cut(s) | 307 |
| Sau96I | GGNCC | 1 cut(s) | 352 |
| SetI | ASST | 4 cut(s) | 43, 125, 264, 399 |
| SinI | GGWCC | 1 cut(s) | 352 |
| Sse9I | AATT | 1 cut(s) | 19 |
| SsiI | CCGC | 1 cut(s) | 296 |
| SspI | AATATT | 1 cut(s) | 379 |
| SspMI | CTAG | 1 cut(s) | 191 |
| TasI | AATT | 1 cut(s) | 19 |
| TatI | WGTACW | 1 cut(s) | 367 |
| Tru1I | TTAA | 4 cut(s) | 140, 168, 225, 339 |
| Tru9I | TTAA | 4 cut(s) | 140, 168, 225, 339 |
| TscAI | CASTG | 2 cut(s) | 250, 284 |
| TseFI | GTSAC | 1 cut(s) | 47 |
| Tsp45I | GTSAC | 1 cut(s) | 47 |
| TspDTI | ATGAA | 1 cut(s) | 32 |
| TspRI | CASTG | 2 cut(s) | 250, 284 |
| VpaK11BI | GGWCC | 1 cut(s) | 352 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 68 |
| XmiI | GTMKAC | 1 cut(s) | 346 |
| XspI | CTAG | 1 cut(s) | 191 |