Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 63 |
| AccB1I | GGYRCC | 1 cut(s) | 63 |
| AccI | GTMKAC | 1 cut(s) | 73 |
| AcsI | RAATTY | 3 cut(s) | 162, 186, 321 |
| AfaI | GTAC | 1 cut(s) | 65 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 294 |
| AgsI | TTSAA | 3 cut(s) | 113, 382, 441 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 310, 342 |
| AluBI | AGCT | 3 cut(s) | 171, 336, 407 |
| AluI | AGCT | 3 cut(s) | 171, 336, 407 |
| Alw26I | GTCTC | 1 cut(s) | 303 |
| AoxI | GGCC | 2 cut(s) | 21, 156 |
| ApoI | RAATTY | 3 cut(s) | 162, 186, 321 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 436 |
| Asp718I | GGTACC | 1 cut(s) | 63 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 55, 88 |
| BanI | GGYRCC | 1 cut(s) | 63 |
| BccI | CCATC | 1 cut(s) | 35 |
| BcoDI | GTCTC | 1 cut(s) | 303 |
| BfaI | CTAG | 1 cut(s) | 404 |
| BmiI | GGNNCC | 1 cut(s) | 65 |
| BmsI | GCATC | 1 cut(s) | 293 |
| BpmI | CTGGAG | 1 cut(s) | 448 |
| BsaBI | GATNNNNATC | 1 cut(s) | 270 |
| BsaJI | CCNNGG | 1 cut(s) | 67 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 294 |
| Bse8I | GATNNNNATC | 1 cut(s) | 270 |
| BseDI | CCNNGG | 1 cut(s) | 67 |
| BseGI | GGATG | 2 cut(s) | 27, 284 |
| BseJI | GATNNNNATC | 1 cut(s) | 270 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BseRI | GAGGAG | 1 cut(s) | 346 |
| BseYI | CCCAGC | 1 cut(s) | 336 |
| BsgI | GTGCAG | 2 cut(s) | 59, 195 |
| BshFI | GGCC | 2 cut(s) | 23, 158 |
| BshNI | GGYRCC | 1 cut(s) | 63 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 294 |
| BsmAI | GTCTC | 1 cut(s) | 303 |
| BsnI | GGCC | 2 cut(s) | 23, 158 |
| BspANI | GGCC | 2 cut(s) | 23, 158 |
| BspLI | GGNNCC | 1 cut(s) | 65 |
| BspT107I | GGYRCC | 1 cut(s) | 63 |
| BssECI | CCNNGG | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 1 cut(s) | 414 |
| BstDEI | CTNAG | 2 cut(s) | 167, 447 |
| BstF5I | GGATG | 2 cut(s) | 27, 284 |
| BstMAI | GTCTC | 1 cut(s) | 303 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 413, 418 |
| BsuRI | GGCC | 2 cut(s) | 23, 158 |
| BtgZI | GCGATG | 1 cut(s) | 242 |
| BtsCI | GGATG | 2 cut(s) | 27, 284 |
| Cac8I | GCNNGC | 1 cut(s) | 414 |
| Csp6I | GTAC | 1 cut(s) | 64 |
| CviAII | CATG | 3 cut(s) | 56, 83, 214 |
| CviJI | RGCY | 9 cut(s) | 23, 158, 171, 200, 256, 336, 378, 407, 426 |
| CviKI_1 | RGCY | 9 cut(s) | 23, 158, 171, 200, 256, 336, 378, 407, 426 |
| CviQI | GTAC | 1 cut(s) | 64 |
| DdeI | CTNAG | 2 cut(s) | 167, 447 |
| FaeI | CATG | 3 cut(s) | 59, 86, 217 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 114, 146 |
| FatI | CATG | 3 cut(s) | 55, 82, 213 |
| FblI | GTMKAC | 1 cut(s) | 73 |
| FokI | GGATG | 2 cut(s) | 14, 271 |
| FspBI | CTAG | 1 cut(s) | 404 |
| GsaI | CCCAGC | 1 cut(s) | 340 |
| GsuI | CTGGAG | 1 cut(s) | 448 |
| HaeIII | GGCC | 2 cut(s) | 23, 158 |
| Hin1II | CATG | 3 cut(s) | 59, 86, 217 |
| Hpy166II | GTNNAC | 1 cut(s) | 74 |
| Hpy8I | GTNNAC | 1 cut(s) | 74 |
| HpyAV | CCTTC | 2 cut(s) | 148, 298 |
| HpyCH4V | TGCA | 4 cut(s) | 40, 104, 176, 284 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 413, 418 |
| HpyF3I | CTNAG | 2 cut(s) | 167, 447 |
| Hsp92II | CATG | 3 cut(s) | 59, 86, 217 |
| KpnI | GGTACC | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 333 |
| LpnPI | CCDG | 6 cut(s) | 46, 162, 280, 291, 322, 412 |
| LweI | GCATC | 1 cut(s) | 293 |
| MaeI | CTAG | 1 cut(s) | 404 |
| MboII | GAAGA | 2 cut(s) | 233, 283 |
| MluCI | AATT | 7 cut(s) | 140, 148, 162, 186, 275, 321, 435 |
| MnlI | CCTC | 6 cut(s) | 34, 36, 77, 324, 358, 362 |
| MroXI | GAANNNNTTC | 1 cut(s) | 436 |
| MseI | TTAA | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 413, 418 |
| NlaIII | CATG | 3 cut(s) | 59, 86, 217 |
| NlaIV | GGNNCC | 1 cut(s) | 65 |
| PdmI | GAANNNNTTC | 1 cut(s) | 436 |
| PspFI | CCCAGC | 1 cut(s) | 336 |
| PspN4I | GGNNCC | 1 cut(s) | 65 |
| RsaI | GTAC | 1 cut(s) | 65 |
| RsaNI | GTAC | 1 cut(s) | 64 |
| SaqAI | TTAA | 1 cut(s) | 147 |
| SetI | ASST | 6 cut(s) | 65, 69, 173, 338, 373, 409 |
| SfaNI | GCATC | 1 cut(s) | 293 |
| Sse9I | AATT | 7 cut(s) | 140, 148, 162, 186, 275, 321, 435 |
| SspMI | CTAG | 1 cut(s) | 404 |
| TaqII | GACCGA | 1 cut(s) | 59 |
| TasI | AATT | 7 cut(s) | 140, 148, 162, 186, 275, 321, 435 |
| Tru1I | TTAA | 1 cut(s) | 147 |
| Tru9I | TTAA | 1 cut(s) | 147 |
| TspDTI | ATGAA | 4 cut(s) | 71, 245, 260, 314 |
| XapI | RAATTY | 3 cut(s) | 162, 186, 321 |
| XmiI | GTMKAC | 1 cut(s) | 73 |
| XmnI | GAANNNNTTC | 1 cut(s) | 436 |
| XspI | CTAG | 1 cut(s) | 404 |