Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 218 |
| AclWI | GGATC | 3 cut(s) | 161, 174, 421 |
| AfaI | GTAC | 4 cut(s) | 274, 290, 299, 350 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 94, 95, 218, 307 |
| AgsI | TTSAA | 1 cut(s) | 196 |
| AjnI | CCWGG | 2 cut(s) | 89, 429 |
| AluBI | AGCT | 4 cut(s) | 35, 192, 455, 491 |
| AluI | AGCT | 4 cut(s) | 35, 192, 455, 491 |
| Alw26I | GTCTC | 2 cut(s) | 96, 316 |
| AlwI | GGATC | 3 cut(s) | 161, 174, 421 |
| ApeKI | GCWGC | 1 cut(s) | 455 |
| AsuHPI | GGTGA | 5 cut(s) | 385, 410, 425, 436, 455 |
| BamHI | GGATCC | 1 cut(s) | 166 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 68, 100 |
| BbsI | GAAGAC | 1 cut(s) | 370 |
| BbvI | GCAGC | 1 cut(s) | 442 |
| BccI | CCATC | 5 cut(s) | 20, 212, 248, 343, 377 |
| BciT130I | CCWGG | 2 cut(s) | 91, 431 |
| BcoDI | GTCTC | 2 cut(s) | 96, 316 |
| BfaI | CTAG | 3 cut(s) | 114, 357, 529 |
| BisI | GCNGC | 1 cut(s) | 456 |
| BlsI | GCNGC | 1 cut(s) | 457 |
| Bme1390I | CCNGG | 2 cut(s) | 91, 431 |
| BmiI | GGNNCC | 2 cut(s) | 168, 210 |
| BmrFI | CCNGG | 2 cut(s) | 91, 431 |
| BmsI | GCATC | 1 cut(s) | 159 |
| BpiI | GAAGAC | 1 cut(s) | 370 |
| BpmI | CTGGAG | 1 cut(s) | 181 |
| BpuEI | CTTGAG | 1 cut(s) | 353 |
| Bsa29I | ATCGAT | 1 cut(s) | 252 |
| BsaI | GGTCTC | 1 cut(s) | 316 |
| BsaJI | CCNNGG | 5 cut(s) | 89, 90, 170, 394, 459 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 94, 95, 218, 307 |
| BseBI | CCWGG | 2 cut(s) | 91, 431 |
| BseCI | ATCGAT | 1 cut(s) | 252 |
| BseDI | CCNNGG | 5 cut(s) | 89, 90, 170, 394, 459 |
| BseGI | GGATG | 2 cut(s) | 223, 335 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 94, 95, 218, 307 |
| BseRI | GAGGAG | 1 cut(s) | 299 |
| BseXI | GCAGC | 1 cut(s) | 442 |
| BsgI | GTGCAG | 1 cut(s) | 469 |
| BshVI | ATCGAT | 1 cut(s) | 252 |
| BslFI | GGGAC | 1 cut(s) | 158 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 94, 95, 218, 307 |
| BsmAI | GTCTC | 2 cut(s) | 96, 316 |
| BsmFI | GGGAC | 1 cut(s) | 158 |
| Bso31I | GGTCTC | 1 cut(s) | 316 |
| Bsp1407I | TGTACA | 1 cut(s) | 272 |
| Bsp143I | GATC | 3 cut(s) | 166, 244, 426 |
| Bsp19I | CCATGG | 2 cut(s) | 170, 394 |
| BspDI | ATCGAT | 1 cut(s) | 252 |
| BspLI | GGNNCC | 2 cut(s) | 168, 210 |
| BspPI | GGATC | 3 cut(s) | 161, 174, 421 |
| BspTNI | GGTCTC | 1 cut(s) | 316 |
| BsrGI | TGTACA | 1 cut(s) | 272 |
| BssECI | CCNNGG | 5 cut(s) | 89, 90, 170, 394, 459 |
| BssMI | GATC | 3 cut(s) | 166, 244, 426 |
| BssT1I | CCWWGG | 3 cut(s) | 170, 394, 459 |
| Bst2UI | CCWGG | 2 cut(s) | 91, 431 |
| Bst4CI | ACNGT | 1 cut(s) | 40 |
| BstAUI | TGTACA | 1 cut(s) | 272 |
| BstDSI | CCRYGG | 2 cut(s) | 170, 394 |
| BstF5I | GGATG | 2 cut(s) | 223, 335 |
| BstKTI | GATC | 3 cut(s) | 169, 247, 429 |
| BstMAI | GTCTC | 2 cut(s) | 96, 316 |
| BstMBI | GATC | 3 cut(s) | 166, 244, 426 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 181, 461, 517 |
| BstNI | CCWGG | 2 cut(s) | 91, 431 |
| BstSCI | CCNGG | 2 cut(s) | 89, 429 |
| BstV1I | GCAGC | 1 cut(s) | 442 |
| BstV2I | GAAGAC | 1 cut(s) | 370 |
| BstX2I | RGATCY | 1 cut(s) | 166 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 342 |
| BstYI | RGATCY | 1 cut(s) | 166 |
| Bsu15I | ATCGAT | 1 cut(s) | 252 |
| BsuTUI | ATCGAT | 1 cut(s) | 252 |
| BtgI | CCRYGG | 2 cut(s) | 170, 394 |
| BtsCI | GGATG | 2 cut(s) | 223, 335 |
| BtsI | GCAGTG | 1 cut(s) | 470 |
| BtsIMutI | CAGTG | 2 cut(s) | 222, 470 |
| ClaI | ATCGAT | 1 cut(s) | 252 |
| Csp6I | GTAC | 4 cut(s) | 273, 289, 298, 349 |
| CviAII | CATG | 5 cut(s) | 68, 171, 232, 302, 395 |
| CviQI | GTAC | 4 cut(s) | 273, 289, 298, 349 |
| DpnI | GATC | 3 cut(s) | 168, 246, 428 |
| DpnII | GATC | 3 cut(s) | 166, 244, 426 |
| Eco130I | CCWWGG | 3 cut(s) | 170, 394, 459 |
| Eco31I | GGTCTC | 1 cut(s) | 316 |
| EcoRII | CCWGG | 2 cut(s) | 89, 429 |
| EcoT14I | CCWWGG | 3 cut(s) | 170, 394, 459 |
| ErhI | CCWWGG | 3 cut(s) | 170, 394, 459 |
| FaeI | CATG | 5 cut(s) | 71, 174, 235, 305, 398 |
| FaiI | YATR | 9 cut(s) | 69, 172, 182, 189, 233, 303, 396, 480, 482 |
| FaqI | GGGAC | 1 cut(s) | 158 |
| FatI | CATG | 5 cut(s) | 67, 170, 231, 301, 394 |
| Fnu4HI | GCNGC | 1 cut(s) | 456 |
| FokI | GGATG | 2 cut(s) | 230, 322 |
| Fsp4HI | GCNGC | 1 cut(s) | 456 |
| FspBI | CTAG | 3 cut(s) | 114, 357, 529 |
| GluI | GCNGC | 1 cut(s) | 456 |
| GsuI | CTGGAG | 1 cut(s) | 181 |
| Hin1II | CATG | 5 cut(s) | 71, 174, 235, 305, 398 |
| HinfI | GANTC | 1 cut(s) | 366 |
| HphI | GGTGA | 5 cut(s) | 385, 410, 425, 436, 455 |
| Hpy166II | GTNNAC | 3 cut(s) | 273, 275, 470 |
| Hpy188III | TCNNGA | 1 cut(s) | 160 |
| Hpy8I | GTNNAC | 3 cut(s) | 273, 275, 470 |
| HpyCH4III | ACNGT | 1 cut(s) | 40 |
| HpyCH4V | TGCA | 1 cut(s) | 450 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 181, 461, 517 |
| Hsp92II | CATG | 5 cut(s) | 71, 174, 235, 305, 398 |
| Kzo9I | GATC | 3 cut(s) | 166, 244, 426 |
| LmnI | GCTCC | 2 cut(s) | 214, 257 |
| LpnPI | CCDG | 6 cut(s) | 76, 103, 145, 416, 443, 506 |
| Lsp1109I | GCAGC | 1 cut(s) | 442 |
| LweI | GCATC | 1 cut(s) | 159 |
| MaeI | CTAG | 3 cut(s) | 114, 357, 529 |
| MalI | GATC | 3 cut(s) | 168, 246, 428 |
| MboI | GATC | 3 cut(s) | 166, 244, 426 |
| MboII | GAAGA | 4 cut(s) | 331, 334, 372, 375 |
| MflI | RGATCY | 1 cut(s) | 166 |
| MlyI | GAGTC | 1 cut(s) | 360 |
| MnlI | CCTC | 5 cut(s) | 88, 110, 156, 277, 523 |
| MseI | TTAA | 1 cut(s) | 51 |
| MslI | CAYNNNNRTG | 2 cut(s) | 236, 340 |
| MspR9I | CCNGG | 2 cut(s) | 91, 431 |
| MvaI | CCWGG | 2 cut(s) | 91, 431 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 181, 461, 517 |
| NcoI | CCATGG | 2 cut(s) | 170, 394 |
| NdeII | GATC | 3 cut(s) | 166, 244, 426 |
| NlaIII | CATG | 5 cut(s) | 71, 174, 235, 305, 398 |
| NlaIV | GGNNCC | 2 cut(s) | 168, 210 |
| PasI | CCCWGGG | 1 cut(s) | 90 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 218 |
| PfoI | TCCNGGA | 1 cut(s) | 429 |
| PkrI | GCNGC | 1 cut(s) | 457 |
| PleI | GAGTC | 1 cut(s) | 360 |
| PpsI | GAGTC | 1 cut(s) | 360 |
| Psp6I | CCWGG | 2 cut(s) | 89, 429 |
| PspGI | CCWGG | 2 cut(s) | 89, 429 |
| PspN4I | GGNNCC | 2 cut(s) | 168, 210 |
| PsuI | RGATCY | 1 cut(s) | 166 |
| RsaI | GTAC | 4 cut(s) | 274, 290, 299, 350 |
| RsaNI | GTAC | 4 cut(s) | 273, 289, 298, 349 |
| RseI | CAYNNNNRTG | 2 cut(s) | 236, 340 |
| SaqAI | TTAA | 1 cut(s) | 51 |
| SatI | GCNGC | 1 cut(s) | 456 |
| Sau3AI | GATC | 3 cut(s) | 166, 244, 426 |
| SchI | GAGTC | 1 cut(s) | 360 |
| ScrFI | CCNGG | 2 cut(s) | 91, 431 |
| SetI | ASST | 7 cut(s) | 37, 121, 194, 358, 375, 457, 493 |
| SfaNI | GCATC | 1 cut(s) | 159 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 236, 340 |
| SmlI | CTYRAG | 1 cut(s) | 368 |
| SmoI | CTYRAG | 1 cut(s) | 368 |
| SspI | AATATT | 1 cut(s) | 379 |
| SspMI | CTAG | 3 cut(s) | 114, 357, 529 |
| StyD4I | CCNGG | 2 cut(s) | 89, 429 |
| StyI | CCWWGG | 3 cut(s) | 170, 394, 459 |
| TaaI | ACNGT | 1 cut(s) | 40 |
| TaqI | TCGA | 1 cut(s) | 252 |
| TatI | WGTACW | 2 cut(s) | 272, 288 |
| Tru1I | TTAA | 1 cut(s) | 51 |
| Tru9I | TTAA | 1 cut(s) | 51 |
| TscAI | CASTG | 2 cut(s) | 229, 477 |
| TseI | GCWGC | 1 cut(s) | 455 |
| TspGWI | ACGGA | 1 cut(s) | 505 |
| TspRI | CASTG | 2 cut(s) | 229, 477 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 218 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 437 |
| XspI | CTAG | 3 cut(s) | 114, 357, 529 |