Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 567 |
| Acc65I | GGTACC | 1 cut(s) | 310 |
| AccB1I | GGYRCC | 1 cut(s) | 310 |
| AciI | CCGC | 1 cut(s) | 308 |
| AclI | AACGTT | 1 cut(s) | 157 |
| AcsI | RAATTY | 4 cut(s) | 237, 383, 417, 561 |
| AfaI | GTAC | 3 cut(s) | 212, 312, 666 |
| AgsI | TTSAA | 1 cut(s) | 242 |
| AjnI | CCWGG | 1 cut(s) | 632 |
| AluBI | AGCT | 6 cut(s) | 69, 191, 351, 399, 572, 620 |
| AluI | AGCT | 6 cut(s) | 69, 191, 351, 399, 572, 620 |
| Alw21I | GWGCWC | 1 cut(s) | 71 |
| Alw26I | GTCTC | 1 cut(s) | 194 |
| AoxI | GGCC | 2 cut(s) | 166, 300 |
| ApoI | RAATTY | 4 cut(s) | 237, 383, 417, 561 |
| Asp718I | GGTACC | 1 cut(s) | 310 |
| AspS9I | GGNCC | 1 cut(s) | 301 |
| AsuII | TTCGAA | 1 cut(s) | 653 |
| BanI | GGYRCC | 1 cut(s) | 310 |
| BanII | GRGCYC | 1 cut(s) | 71 |
| BbsI | GAAGAC | 1 cut(s) | 537 |
| Bbv12I | GWGCWC | 1 cut(s) | 71 |
| BccI | CCATC | 2 cut(s) | 594, 748 |
| BciT130I | CCWGG | 1 cut(s) | 634 |
| BciVI | GTATCC | 1 cut(s) | 688 |
| BcoDI | GTCTC | 1 cut(s) | 194 |
| BfaI | CTAG | 1 cut(s) | 686 |
| BfuI | GTATCC | 1 cut(s) | 688 |
| BmcAI | AGTACT | 1 cut(s) | 212 |
| Bme1390I | CCNGG | 1 cut(s) | 634 |
| BmgT120I | GGNCC | 1 cut(s) | 301 |
| BmiI | GGNNCC | 2 cut(s) | 312, 738 |
| BmrFI | CCNGG | 1 cut(s) | 634 |
| BmsI | GCATC | 2 cut(s) | 47, 592 |
| BpiI | GAAGAC | 1 cut(s) | 537 |
| BpmI | CTGGAG | 1 cut(s) | 629 |
| Bpu14I | TTCGAA | 1 cut(s) | 653 |
| BsaJI | CCNNGG | 1 cut(s) | 731 |
| Bse1I | ACTGG | 1 cut(s) | 120 |
| Bse3DI | GCAATG | 1 cut(s) | 330 |
| BseBI | CCWGG | 1 cut(s) | 634 |
| BseDI | CCNNGG | 1 cut(s) | 731 |
| BseGI | GGATG | 1 cut(s) | 607 |
| BseMI | GCAATG | 1 cut(s) | 330 |
| BseNI | ACTGG | 1 cut(s) | 120 |
| BshFI | GGCC | 2 cut(s) | 168, 302 |
| BshNI | GGYRCC | 1 cut(s) | 310 |
| BsiHKAI | GWGCWC | 1 cut(s) | 71 |
| BsmAI | GTCTC | 1 cut(s) | 194 |
| BsmI | GAATGC | 1 cut(s) | 681 |
| BsnI | GGCC | 2 cut(s) | 168, 302 |
| Bsp119I | TTCGAA | 1 cut(s) | 653 |
| Bsp1286I | GDGCHC | 1 cut(s) | 71 |
| Bsp143I | GATC | 2 cut(s) | 112, 718 |
| BspACI | CCGC | 1 cut(s) | 308 |
| BspANI | GGCC | 2 cut(s) | 168, 302 |
| BspHI | TCATGA | 1 cut(s) | 151 |
| BspLI | GGNNCC | 2 cut(s) | 312, 738 |
| BspQI | GCTCTTC | 1 cut(s) | 181 |
| BspT104I | TTCGAA | 1 cut(s) | 653 |
| BspT107I | GGYRCC | 1 cut(s) | 310 |
| BsrDI | GCAATG | 1 cut(s) | 330 |
| BsrI | ACTGG | 1 cut(s) | 120 |
| BssECI | CCNNGG | 1 cut(s) | 731 |
| BssMI | GATC | 2 cut(s) | 112, 718 |
| BssT1I | CCWWGG | 1 cut(s) | 731 |
| Bst2UI | CCWGG | 1 cut(s) | 634 |
| Bst6I | CTCTTC | 2 cut(s) | 181, 754 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 103 |
| BstBI | TTCGAA | 1 cut(s) | 653 |
| BstDEI | CTNAG | 2 cut(s) | 127, 263 |
| BstF5I | GGATG | 1 cut(s) | 607 |
| BstKTI | GATC | 2 cut(s) | 115, 721 |
| BstMAI | GTCTC | 1 cut(s) | 194 |
| BstMBI | GATC | 2 cut(s) | 112, 718 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 103, 509, 523 |
| BstNI | CCWGG | 1 cut(s) | 634 |
| BstSCI | CCNGG | 1 cut(s) | 632 |
| BstV2I | GAAGAC | 1 cut(s) | 537 |
| BsuI | GTATCC | 1 cut(s) | 688 |
| BsuRI | GGCC | 2 cut(s) | 168, 302 |
| BtsCI | GGATG | 1 cut(s) | 607 |
| CciI | TCATGA | 1 cut(s) | 151 |
| Cfr13I | GGNCC | 1 cut(s) | 301 |
| Csp6I | GTAC | 3 cut(s) | 211, 311, 665 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 162, 197 |
| CviAII | CATG | 1 cut(s) | 152 |
| CviQI | GTAC | 3 cut(s) | 211, 311, 665 |
| DdeI | CTNAG | 2 cut(s) | 127, 263 |
| DpnI | GATC | 2 cut(s) | 114, 720 |
| DpnII | GATC | 2 cut(s) | 112, 718 |
| Eam1104I | CTCTTC | 2 cut(s) | 181, 754 |
| EarI | CTCTTC | 2 cut(s) | 181, 754 |
| Ecl136II | GAGCTC | 1 cut(s) | 69 |
| Eco130I | CCWWGG | 1 cut(s) | 731 |
| Eco147I | AGGCCT | 1 cut(s) | 168 |
| Eco24I | GRGCYC | 1 cut(s) | 71 |
| Eco53kI | GAGCTC | 1 cut(s) | 69 |
| EcoICRI | GAGCTC | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 632 |
| EcoT14I | CCWWGG | 1 cut(s) | 731 |
| EcoT38I | GRGCYC | 1 cut(s) | 71 |
| ErhI | CCWWGG | 1 cut(s) | 731 |
| FaeI | CATG | 1 cut(s) | 155 |
| FatI | CATG | 1 cut(s) | 151 |
| FokI | GGATG | 1 cut(s) | 614 |
| FriOI | GRGCYC | 1 cut(s) | 71 |
| FspBI | CTAG | 1 cut(s) | 686 |
| GsuI | CTGGAG | 1 cut(s) | 629 |
| HaeIII | GGCC | 2 cut(s) | 168, 302 |
| Hin1II | CATG | 1 cut(s) | 155 |
| HinfI | GANTC | 4 cut(s) | 7, 611, 727, 782 |
| Hpy166II | GTNNAC | 1 cut(s) | 449 |
| Hpy188I | TCNGA | 1 cut(s) | 439 |
| Hpy188III | TCNNGA | 4 cut(s) | 11, 152, 608, 752 |
| Hpy8I | GTNNAC | 1 cut(s) | 449 |
| HpyAV | CCTTC | 4 cut(s) | 156, 633, 649, 819 |
| HpyCH4IV | ACGT | 1 cut(s) | 157 |
| HpyCH4V | TGCA | 4 cut(s) | 4, 106, 323, 491 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 103, 509, 523 |
| HpyF3I | CTNAG | 2 cut(s) | 127, 263 |
| HpySE526I | ACGT | 1 cut(s) | 157 |
| Hsp92II | CATG | 1 cut(s) | 155 |
| KpnI | GGTACC | 1 cut(s) | 314 |
| Kzo9I | GATC | 2 cut(s) | 112, 718 |
| LguI | GCTCTTC | 1 cut(s) | 181 |
| LmnI | GCTCC | 3 cut(s) | 94, 269, 625 |
| LpnPI | CCDG | 7 cut(s) | 27, 133, 258, 593, 619, 646, 765 |
| LweI | GCATC | 2 cut(s) | 47, 592 |
| MaeI | CTAG | 1 cut(s) | 686 |
| MaeII | ACGT | 1 cut(s) | 157 |
| MalI | GATC | 2 cut(s) | 114, 720 |
| MboI | GATC | 2 cut(s) | 112, 718 |
| MboII | GAAGA | 6 cut(s) | 198, 329, 424, 537, 740, 771 |
| MfeI | CAATTG | 1 cut(s) | 518 |
| MhlI | GDGCHC | 1 cut(s) | 71 |
| MlyI | GAGTC | 1 cut(s) | 620 |
| MmeI | TCCRAC | 1 cut(s) | 513 |
| MnlI | CCTC | 3 cut(s) | 124, 179, 755 |
| MseI | TTAA | 5 cut(s) | 54, 215, 669, 767, 816 |
| MspR9I | CCNGG | 1 cut(s) | 634 |
| MunI | CAATTG | 1 cut(s) | 518 |
| Mva1269I | GAATGC | 1 cut(s) | 681 |
| MvaI | CCWGG | 1 cut(s) | 634 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 103, 509, 523 |
| NdeII | GATC | 2 cut(s) | 112, 718 |
| NlaIII | CATG | 1 cut(s) | 155 |
| NlaIV | GGNNCC | 2 cut(s) | 312, 738 |
| NspV | TTCGAA | 1 cut(s) | 653 |
| PagI | TCATGA | 1 cut(s) | 151 |
| PceI | AGGCCT | 1 cut(s) | 168 |
| PciSI | GCTCTTC | 1 cut(s) | 181 |
| PctI | GAATGC | 1 cut(s) | 681 |
| PfeI | GAWTC | 3 cut(s) | 7, 727, 782 |
| PleI | GAGTC | 1 cut(s) | 619 |
| PpsI | GAGTC | 1 cut(s) | 619 |
| PsiI | TTATAA | 1 cut(s) | 567 |
| Psp124BI | GAGCTC | 1 cut(s) | 71 |
| Psp1406I | AACGTT | 1 cut(s) | 157 |
| Psp6I | CCWGG | 1 cut(s) | 632 |
| PspGI | CCWGG | 1 cut(s) | 632 |
| PspN4I | GGNNCC | 2 cut(s) | 312, 738 |
| PspPI | GGNCC | 1 cut(s) | 301 |
| RsaI | GTAC | 3 cut(s) | 212, 312, 666 |
| RsaNI | GTAC | 3 cut(s) | 211, 311, 665 |
| SacI | GAGCTC | 1 cut(s) | 71 |
| SapI | GCTCTTC | 1 cut(s) | 181 |
| SaqAI | TTAA | 5 cut(s) | 54, 215, 669, 767, 816 |
| Sau3AI | GATC | 2 cut(s) | 112, 718 |
| Sau96I | GGNCC | 1 cut(s) | 301 |
| ScaI | AGTACT | 1 cut(s) | 212 |
| SchI | GAGTC | 1 cut(s) | 620 |
| ScrFI | CCNGG | 1 cut(s) | 634 |
| SduI | GDGCHC | 1 cut(s) | 71 |
| SfaNI | GCATC | 2 cut(s) | 47, 592 |
| SfuI | TTCGAA | 1 cut(s) | 653 |
| SseBI | AGGCCT | 1 cut(s) | 168 |
| SsiI | CCGC | 1 cut(s) | 308 |
| SspMI | CTAG | 1 cut(s) | 686 |
| SstI | GAGCTC | 1 cut(s) | 71 |
| StuI | AGGCCT | 1 cut(s) | 168 |
| StyD4I | CCNGG | 1 cut(s) | 632 |
| StyI | CCWWGG | 1 cut(s) | 731 |
| TaiI | ACGT | 1 cut(s) | 160 |
| TaqI | TCGA | 2 cut(s) | 574, 653 |
| TatI | WGTACW | 1 cut(s) | 210 |
| TfiI | GAWTC | 3 cut(s) | 7, 727, 782 |
| Tru1I | TTAA | 5 cut(s) | 54, 215, 669, 767, 816 |
| Tru9I | TTAA | 5 cut(s) | 54, 215, 669, 767, 816 |
| TspDTI | ATGAA | 4 cut(s) | 168, 410, 615, 790 |
| TspGWI | ACGGA | 1 cut(s) | 531 |
| XapI | RAATTY | 4 cut(s) | 237, 383, 417, 561 |
| XspI | CTAG | 1 cut(s) | 686 |
| ZrmI | AGTACT | 1 cut(s) | 212 |