Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 47 |
| AcsI | RAATTY | 1 cut(s) | 66 |
| AfaI | GTAC | 2 cut(s) | 342, 361 |
| AgsI | TTSAA | 2 cut(s) | 110, 289 |
| AhlI | ACTAGT | 1 cut(s) | 281 |
| AluBI | AGCT | 1 cut(s) | 272 |
| AluI | AGCT | 1 cut(s) | 272 |
| Alw26I | GTCTC | 1 cut(s) | 324 |
| ApoI | RAATTY | 1 cut(s) | 66 |
| AspLEI | GCGC | 1 cut(s) | 177 |
| AsuC2I | CCSGG | 1 cut(s) | 335 |
| AsuHPI | GGTGA | 2 cut(s) | 74, 266 |
| BcnI | CCSGG | 1 cut(s) | 335 |
| BcoDI | GTCTC | 1 cut(s) | 324 |
| BcuI | ACTAGT | 1 cut(s) | 281 |
| BfaI | CTAG | 3 cut(s) | 282, 296, 369 |
| Bme1390I | CCNGG | 1 cut(s) | 335 |
| BmrFI | CCNGG | 1 cut(s) | 335 |
| BpuMI | CCSGG | 1 cut(s) | 335 |
| Bsa29I | ATCGAT | 3 cut(s) | 160, 183, 265 |
| Bse3DI | GCAATG | 1 cut(s) | 137 |
| BseCI | ATCGAT | 3 cut(s) | 160, 183, 265 |
| BseGI | GGATG | 1 cut(s) | 343 |
| BseMI | GCAATG | 1 cut(s) | 137 |
| BseMII | CTCAG | 1 cut(s) | 156 |
| BseRI | GAGGAG | 1 cut(s) | 329 |
| BshVI | ATCGAT | 3 cut(s) | 160, 183, 265 |
| BsiSI | CCGG | 1 cut(s) | 334 |
| BsmAI | GTCTC | 1 cut(s) | 324 |
| BsmI | GAATGC | 1 cut(s) | 100 |
| Bsp143I | GATC | 2 cut(s) | 157, 161 |
| BspACI | CCGC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 157 |
| BspDI | ATCGAT | 3 cut(s) | 160, 183, 265 |
| BsrDI | GCAATG | 1 cut(s) | 137 |
| BssMI | GATC | 2 cut(s) | 157, 161 |
| BstDEI | CTNAG | 1 cut(s) | 165 |
| BstF5I | GGATG | 1 cut(s) | 343 |
| BstHHI | GCGC | 1 cut(s) | 177 |
| BstKTI | GATC | 2 cut(s) | 160, 164 |
| BstMAI | GTCTC | 1 cut(s) | 324 |
| BstMBI | GATC | 2 cut(s) | 157, 161 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| BstSCI | CCNGG | 1 cut(s) | 333 |
| Bsu15I | ATCGAT | 3 cut(s) | 160, 183, 265 |
| BsuTUI | ATCGAT | 3 cut(s) | 160, 183, 265 |
| BtsCI | GGATG | 1 cut(s) | 343 |
| CfoI | GCGC | 1 cut(s) | 177 |
| ClaI | ATCGAT | 3 cut(s) | 160, 183, 265 |
| Csp6I | GTAC | 2 cut(s) | 341, 360 |
| CviAII | CATG | 2 cut(s) | 20, 40 |
| CviJI | RGCY | 4 cut(s) | 53, 62, 77, 272 |
| CviKI_1 | RGCY | 4 cut(s) | 53, 62, 77, 272 |
| CviQI | GTAC | 2 cut(s) | 341, 360 |
| DdeI | CTNAG | 1 cut(s) | 165 |
| DpnI | GATC | 2 cut(s) | 159, 163 |
| DpnII | GATC | 2 cut(s) | 157, 161 |
| EcoRI | GAATTC | 1 cut(s) | 66 |
| FaeI | CATG | 2 cut(s) | 23, 43 |
| FaiI | YATR | 5 cut(s) | 21, 41, 199, 234, 348 |
| FatI | CATG | 2 cut(s) | 19, 39 |
| FokI | GGATG | 1 cut(s) | 350 |
| FspBI | CTAG | 3 cut(s) | 282, 296, 369 |
| GlaI | GCGC | 1 cut(s) | 176 |
| HapII | CCGG | 1 cut(s) | 334 |
| HhaI | GCGC | 1 cut(s) | 177 |
| Hin1II | CATG | 2 cut(s) | 23, 43 |
| Hin6I | GCGC | 1 cut(s) | 175 |
| HinP1I | GCGC | 1 cut(s) | 175 |
| HinfI | GANTC | 2 cut(s) | 317, 353 |
| HpaII | CCGG | 1 cut(s) | 334 |
| HphI | GGTGA | 2 cut(s) | 74, 266 |
| Hpy166II | GTNNAC | 1 cut(s) | 360 |
| Hpy188I | TCNGA | 2 cut(s) | 166, 225 |
| Hpy188III | TCNNGA | 1 cut(s) | 296 |
| Hpy8I | GTNNAC | 1 cut(s) | 360 |
| HpyCH4IV | ACGT | 1 cut(s) | 7 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 142 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| HpyF3I | CTNAG | 1 cut(s) | 165 |
| HpySE526I | ACGT | 1 cut(s) | 7 |
| Hsp92II | CATG | 2 cut(s) | 23, 43 |
| HspAI | GCGC | 1 cut(s) | 175 |
| Kzo9I | GATC | 2 cut(s) | 157, 161 |
| LpnPI | CCDG | 3 cut(s) | 48, 336, 347 |
| MaeI | CTAG | 3 cut(s) | 282, 296, 369 |
| MaeII | ACGT | 1 cut(s) | 7 |
| MalI | GATC | 2 cut(s) | 159, 163 |
| MboI | GATC | 2 cut(s) | 157, 161 |
| MboII | GAAGA | 2 cut(s) | 167, 229 |
| MluCI | AATT | 1 cut(s) | 66 |
| MlyI | GAGTC | 1 cut(s) | 326 |
| MnlI | CCTC | 5 cut(s) | 27, 43, 160, 307, 365 |
| MspI | CCGG | 1 cut(s) | 334 |
| MspR9I | CCNGG | 1 cut(s) | 335 |
| Mva1269I | GAATGC | 1 cut(s) | 100 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NciI | CCSGG | 1 cut(s) | 335 |
| NdeII | GATC | 2 cut(s) | 157, 161 |
| NlaIII | CATG | 2 cut(s) | 23, 43 |
| PctI | GAATGC | 1 cut(s) | 100 |
| PfeI | GAWTC | 1 cut(s) | 353 |
| PfoI | TCCNGGA | 1 cut(s) | 333 |
| PleI | GAGTC | 1 cut(s) | 325 |
| PpsI | GAGTC | 1 cut(s) | 325 |
| RsaI | GTAC | 2 cut(s) | 342, 361 |
| RsaNI | GTAC | 2 cut(s) | 341, 360 |
| Sau3AI | GATC | 2 cut(s) | 157, 161 |
| SchI | GAGTC | 1 cut(s) | 326 |
| ScrFI | CCNGG | 1 cut(s) | 335 |
| SetI | ASST | 6 cut(s) | 10, 108, 171, 274, 279, 376 |
| SpeI | ACTAGT | 1 cut(s) | 281 |
| Sse9I | AATT | 1 cut(s) | 66 |
| SsiI | CCGC | 1 cut(s) | 47 |
| SspI | AATATT | 1 cut(s) | 89 |
| SspMI | CTAG | 3 cut(s) | 282, 296, 369 |
| StyD4I | CCNGG | 1 cut(s) | 333 |
| TaiI | ACGT | 1 cut(s) | 10 |
| TaqI | TCGA | 3 cut(s) | 160, 183, 265 |
| TasI | AATT | 1 cut(s) | 66 |
| TatI | WGTACW | 2 cut(s) | 340, 359 |
| TfiI | GAWTC | 1 cut(s) | 353 |
| XapI | RAATTY | 1 cut(s) | 66 |
| XbaI | TCTAGA | 1 cut(s) | 295 |
| XspI | CTAG | 3 cut(s) | 282, 296, 369 |