Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 27 |
| Acc36I | ACCTGC | 1 cut(s) | 549 |
| Acc65I | GGTACC | 1 cut(s) | 496 |
| AccB1I | GGYRCC | 1 cut(s) | 496 |
| AciI | CCGC | 2 cut(s) | 137, 447 |
| AclWI | GGATC | 3 cut(s) | 147, 310, 449 |
| AcsI | RAATTY | 2 cut(s) | 513, 711 |
| AfaI | GTAC | 2 cut(s) | 110, 498 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 165 |
| AflIII | ACRYGT | 1 cut(s) | 415 |
| AgsI | TTSAA | 4 cut(s) | 199, 620, 692, 721 |
| AjnI | CCWGG | 1 cut(s) | 499 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 405, 437 |
| AluBI | AGCT | 6 cut(s) | 44, 89, 491, 677, 743, 775 |
| AluI | AGCT | 6 cut(s) | 44, 89, 491, 677, 743, 775 |
| Alw21I | GWGCWC | 1 cut(s) | 493 |
| Alw26I | GTCTC | 2 cut(s) | 52, 755 |
| AlwI | GGATC | 3 cut(s) | 147, 310, 449 |
| AoxI | GGCC | 1 cut(s) | 528 |
| ApeKI | GCWGC | 2 cut(s) | 534, 544 |
| ApoI | RAATTY | 2 cut(s) | 513, 711 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 747, 779 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 417 |
| Asp718I | GGTACC | 1 cut(s) | 496 |
| AspS9I | GGNCC | 1 cut(s) | 528 |
| AsuHPI | GGTGA | 2 cut(s) | 464, 602 |
| BanI | GGYRCC | 1 cut(s) | 496 |
| BanII | GRGCYC | 1 cut(s) | 493 |
| BbsI | GAAGAC | 1 cut(s) | 627 |
| Bbv12I | GWGCWC | 1 cut(s) | 493 |
| BbvI | GCAGC | 2 cut(s) | 521, 531 |
| BccI | CCATC | 4 cut(s) | 207, 221, 304, 575 |
| BciT130I | CCWGG | 1 cut(s) | 501 |
| BclI | TGATCA | 2 cut(s) | 253, 607 |
| BcoDI | GTCTC | 2 cut(s) | 52, 755 |
| BfaI | CTAG | 2 cut(s) | 408, 787 |
| BfmI | CTRYAG | 1 cut(s) | 321 |
| BfuAI | ACCTGC | 1 cut(s) | 549 |
| BisI | GCNGC | 2 cut(s) | 535, 545 |
| BlsI | GCNGC | 2 cut(s) | 536, 546 |
| BmcAI | AGTACT | 1 cut(s) | 110 |
| Bme1390I | CCNGG | 1 cut(s) | 501 |
| BmgT120I | GGNCC | 1 cut(s) | 528 |
| BmiI | GGNNCC | 2 cut(s) | 264, 498 |
| BmrFI | CCNGG | 1 cut(s) | 501 |
| BmsI | GCATC | 2 cut(s) | 139, 446 |
| BpiI | GAAGAC | 1 cut(s) | 627 |
| Bpu10I | CCTNAGC | 1 cut(s) | 492 |
| BsaJI | CCNNGG | 1 cut(s) | 759 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 216, 246, 684, 714 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 165 |
| Bse118I | RCCGGY | 1 cut(s) | 449 |
| Bse1I | ACTGG | 1 cut(s) | 191 |
| Bse3DI | GCAATG | 1 cut(s) | 433 |
| BseBI | CCWGG | 1 cut(s) | 501 |
| BseDI | CCNNGG | 1 cut(s) | 759 |
| BseGI | GGATG | 2 cut(s) | 285, 735 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BseMI | GCAATG | 1 cut(s) | 433 |
| BseMII | CTCAG | 2 cut(s) | 157, 506 |
| BseNI | ACTGG | 1 cut(s) | 191 |
| BseXI | GCAGC | 2 cut(s) | 521, 531 |
| BshFI | GGCC | 1 cut(s) | 530 |
| BshNI | GGYRCC | 1 cut(s) | 496 |
| BsiHKAI | GWGCWC | 1 cut(s) | 493 |
| BsiSI | CCGG | 1 cut(s) | 450 |
| BslFI | GGGAC | 2 cut(s) | 633, 655 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 165 |
| BsmAI | GTCTC | 2 cut(s) | 52, 755 |
| BsmFI | GGGAC | 2 cut(s) | 633, 655 |
| BsmI | GAATGC | 1 cut(s) | 315 |
| BsnI | GGCC | 1 cut(s) | 530 |
| Bsp1286I | GDGCHC | 1 cut(s) | 493 |
| Bsp143I | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| BspACI | CCGC | 2 cut(s) | 137, 447 |
| BspANI | GGCC | 1 cut(s) | 530 |
| BspCNI | CTCAG | 2 cut(s) | 156, 505 |
| BspLI | GGNNCC | 2 cut(s) | 264, 498 |
| BspMI | ACCTGC | 1 cut(s) | 549 |
| BspPI | GGATC | 3 cut(s) | 147, 310, 449 |
| BspT107I | GGYRCC | 1 cut(s) | 496 |
| BsrDI | GCAATG | 1 cut(s) | 433 |
| BsrFI | RCCGGY | 1 cut(s) | 449 |
| BsrI | ACTGG | 1 cut(s) | 191 |
| BssAI | RCCGGY | 1 cut(s) | 449 |
| BssECI | CCNNGG | 1 cut(s) | 759 |
| BssMI | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| Bst2UI | CCWGG | 1 cut(s) | 501 |
| Bst4CI | ACNGT | 2 cut(s) | 385, 471 |
| BstC8I | GCNNGC | 2 cut(s) | 135, 532 |
| BstDEI | CTNAG | 2 cut(s) | 143, 492 |
| BstF5I | GGATG | 2 cut(s) | 285, 735 |
| BstKTI | GATC | 6 cut(s) | 142, 256, 305, 457, 610, 786 |
| BstMAI | GTCTC | 2 cut(s) | 52, 755 |
| BstMBI | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 41, 355 |
| BstNI | CCWGG | 1 cut(s) | 501 |
| BstNSI | RCATGY | 1 cut(s) | 419 |
| BstSCI | CCNGG | 1 cut(s) | 499 |
| BstSFI | CTRYAG | 1 cut(s) | 321 |
| BstV1I | GCAGC | 2 cut(s) | 521, 531 |
| BstV2I | GAAGAC | 1 cut(s) | 627 |
| BstX2I | RGATCY | 2 cut(s) | 139, 302 |
| BstYI | RGATCY | 2 cut(s) | 139, 302 |
| BsuRI | GGCC | 1 cut(s) | 530 |
| BtsCI | GGATG | 2 cut(s) | 285, 735 |
| BtsIMutI | CAGTG | 1 cut(s) | 263 |
| BveI | ACCTGC | 1 cut(s) | 549 |
| Cac8I | GCNNGC | 2 cut(s) | 135, 532 |
| Cfr10I | RCCGGY | 1 cut(s) | 449 |
| Cfr13I | GGNCC | 1 cut(s) | 528 |
| Csp6I | GTAC | 2 cut(s) | 109, 497 |
| CviAII | CATG | 2 cut(s) | 251, 416 |
| CviQI | GTAC | 2 cut(s) | 109, 497 |
| DdeI | CTNAG | 2 cut(s) | 143, 492 |
| DpnI | GATC | 6 cut(s) | 141, 255, 304, 456, 609, 785 |
| DpnII | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| DraI | TTTAAA | 1 cut(s) | 10 |
| EciI | GGCGGA | 1 cut(s) | 436 |
| Ecl136II | GAGCTC | 1 cut(s) | 491 |
| Eco24I | GRGCYC | 1 cut(s) | 493 |
| Eco53kI | GAGCTC | 1 cut(s) | 491 |
| EcoICRI | GAGCTC | 1 cut(s) | 491 |
| EcoO109I | RGGNCCY | 1 cut(s) | 528 |
| EcoRII | CCWGG | 1 cut(s) | 499 |
| EcoT38I | GRGCYC | 1 cut(s) | 493 |
| FaeI | CATG | 2 cut(s) | 254, 419 |
| FaqI | GGGAC | 2 cut(s) | 633, 655 |
| FatI | CATG | 2 cut(s) | 250, 415 |
| FbaI | TGATCA | 2 cut(s) | 253, 607 |
| Fnu4HI | GCNGC | 2 cut(s) | 535, 545 |
| FokI | GGATG | 2 cut(s) | 272, 742 |
| FriOI | GRGCYC | 1 cut(s) | 493 |
| Fsp4HI | GCNGC | 2 cut(s) | 535, 545 |
| FspBI | CTAG | 2 cut(s) | 408, 787 |
| GluI | GCNGC | 2 cut(s) | 535, 545 |
| HaeIII | GGCC | 1 cut(s) | 530 |
| HapII | CCGG | 1 cut(s) | 450 |
| Hin1II | CATG | 2 cut(s) | 254, 419 |
| HinfI | GANTC | 1 cut(s) | 748 |
| HpaII | CCGG | 1 cut(s) | 450 |
| HphI | GGTGA | 2 cut(s) | 464, 602 |
| Hpy166II | GTNNAC | 1 cut(s) | 381 |
| Hpy188I | TCNGA | 1 cut(s) | 146 |
| Hpy188III | TCNNGA | 3 cut(s) | 289, 300, 341 |
| Hpy8I | GTNNAC | 1 cut(s) | 381 |
| HpyAV | CCTTC | 6 cut(s) | 84, 169, 193, 646, 698, 713 |
| HpyCH4III | ACNGT | 2 cut(s) | 385, 471 |
| HpyCH4V | TGCA | 3 cut(s) | 152, 437, 537 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 41, 355 |
| HpyF3I | CTNAG | 2 cut(s) | 143, 492 |
| Hsp92II | CATG | 2 cut(s) | 254, 419 |
| KpnI | GGTACC | 1 cut(s) | 500 |
| Ksp22I | TGATCA | 2 cut(s) | 253, 607 |
| Kzo9I | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| LmnI | GCTCC | 1 cut(s) | 682 |
| Lsp1109I | GCAGC | 2 cut(s) | 521, 531 |
| LweI | GCATC | 2 cut(s) | 139, 446 |
| MaeI | CTAG | 2 cut(s) | 408, 787 |
| MaeIII | GTNAC | 1 cut(s) | 64 |
| MalI | GATC | 6 cut(s) | 141, 255, 304, 456, 609, 785 |
| MboI | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| MboII | GAAGA | 1 cut(s) | 632 |
| MflI | RGATCY | 2 cut(s) | 139, 302 |
| MhlI | GDGCHC | 1 cut(s) | 493 |
| MluCI | AATT | 3 cut(s) | 118, 513, 711 |
| MlyI | GAGTC | 1 cut(s) | 757 |
| MnlI | CCTC | 6 cut(s) | 166, 293, 519, 609, 717, 754 |
| MroXI | GAANNNNTTC | 1 cut(s) | 417 |
| MseI | TTAA | 3 cut(s) | 9, 462, 510 |
| MspI | CCGG | 1 cut(s) | 450 |
| MspR9I | CCNGG | 1 cut(s) | 501 |
| Mva1269I | GAATGC | 1 cut(s) | 315 |
| MvaI | CCWGG | 1 cut(s) | 501 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 41, 355 |
| NdeII | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| NlaIII | CATG | 2 cut(s) | 254, 419 |
| NlaIV | GGNNCC | 2 cut(s) | 264, 498 |
| NmeAIII | GCCGAG | 1 cut(s) | 784 |
| NspI | RCATGY | 1 cut(s) | 419 |
| PciI | ACATGT | 1 cut(s) | 415 |
| PctI | GAATGC | 1 cut(s) | 315 |
| PdmI | GAANNNNTTC | 1 cut(s) | 417 |
| PkrI | GCNGC | 2 cut(s) | 536, 546 |
| PleI | GAGTC | 1 cut(s) | 756 |
| PpsI | GAGTC | 1 cut(s) | 756 |
| PscI | ACATGT | 1 cut(s) | 415 |
| PsiI | TTATAA | 1 cut(s) | 27 |
| Psp124BI | GAGCTC | 1 cut(s) | 493 |
| Psp6I | CCWGG | 1 cut(s) | 499 |
| PspGI | CCWGG | 1 cut(s) | 499 |
| PspN4I | GGNNCC | 2 cut(s) | 264, 498 |
| PspPI | GGNCC | 1 cut(s) | 528 |
| PsuI | RGATCY | 2 cut(s) | 139, 302 |
| RsaI | GTAC | 2 cut(s) | 110, 498 |
| RsaNI | GTAC | 2 cut(s) | 109, 497 |
| SacI | GAGCTC | 1 cut(s) | 493 |
| SaqAI | TTAA | 3 cut(s) | 9, 462, 510 |
| SatI | GCNGC | 2 cut(s) | 535, 545 |
| Sau3AI | GATC | 6 cut(s) | 139, 253, 302, 454, 607, 783 |
| Sau96I | GGNCC | 1 cut(s) | 528 |
| ScaI | AGTACT | 1 cut(s) | 110 |
| SchI | GAGTC | 1 cut(s) | 757 |
| ScrFI | CCNGG | 1 cut(s) | 501 |
| SduI | GDGCHC | 1 cut(s) | 493 |
| SfaNI | GCATC | 2 cut(s) | 139, 446 |
| SfcI | CTRYAG | 1 cut(s) | 321 |
| SgrAI | CRCCGGYG | 1 cut(s) | 449 |
| Sse9I | AATT | 3 cut(s) | 118, 513, 711 |
| SsiI | CCGC | 2 cut(s) | 137, 447 |
| SspI | AATATT | 3 cut(s) | 16, 238, 353 |
| SspMI | CTAG | 2 cut(s) | 408, 787 |
| SstI | GAGCTC | 1 cut(s) | 493 |
| StyD4I | CCNGG | 1 cut(s) | 499 |
| TaaI | ACNGT | 2 cut(s) | 385, 471 |
| TaqI | TCGA | 5 cut(s) | 91, 211, 241, 328, 440 |
| TasI | AATT | 3 cut(s) | 118, 513, 711 |
| TatI | WGTACW | 1 cut(s) | 108 |
| Tru1I | TTAA | 3 cut(s) | 9, 462, 510 |
| Tru9I | TTAA | 3 cut(s) | 9, 462, 510 |
| TscAI | CASTG | 1 cut(s) | 263 |
| TseI | GCWGC | 2 cut(s) | 534, 544 |
| TspDTI | ATGAA | 1 cut(s) | 66 |
| TspRI | CASTG | 1 cut(s) | 263 |
| XapI | RAATTY | 2 cut(s) | 513, 711 |
| XceI | RCATGY | 1 cut(s) | 419 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 296 |
| XmnI | GAANNNNTTC | 1 cut(s) | 417 |
| XspI | CTAG | 2 cut(s) | 408, 787 |
| ZrmI | AGTACT | 1 cut(s) | 110 |