Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 2 - 112 | 4.3e-22 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 389 |
| Acc36I | ACCTGC | 1 cut(s) | 145 |
| AclWI | GGATC | 1 cut(s) | 345 |
| AcsI | RAATTY | 1 cut(s) | 394 |
| AfaI | GTAC | 2 cut(s) | 24, 159 |
| AgsI | TTSAA | 4 cut(s) | 167, 191, 222, 410 |
| AjnI | CCWGG | 1 cut(s) | 362 |
| AluBI | AGCT | 5 cut(s) | 56, 103, 119, 317, 352 |
| AluI | AGCT | 5 cut(s) | 56, 103, 119, 317, 352 |
| AlwI | GGATC | 1 cut(s) | 345 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 86 |
| Ama87I | CYCGRG | 1 cut(s) | 380 |
| ApeKI | GCWGC | 5 cut(s) | 53, 80, 119, 142, 203 |
| ApoI | RAATTY | 1 cut(s) | 394 |
| AvaI | CYCGRG | 1 cut(s) | 380 |
| BbvI | GCAGC | 5 cut(s) | 65, 92, 106, 129, 190 |
| BccI | CCATC | 2 cut(s) | 292, 328 |
| BciT130I | CCWGG | 1 cut(s) | 364 |
| BfmI | CTRYAG | 1 cut(s) | 120 |
| BfuAI | ACCTGC | 1 cut(s) | 145 |
| BisI | GCNGC | 5 cut(s) | 54, 81, 120, 143, 204 |
| BlsI | GCNGC | 5 cut(s) | 55, 82, 121, 144, 205 |
| Bme1390I | CCNGG | 1 cut(s) | 364 |
| BmeT110I | CYCGRG | 1 cut(s) | 380 |
| BmrFI | CCNGG | 1 cut(s) | 364 |
| BmsI | GCATC | 2 cut(s) | 154, 205 |
| BseBI | CCWGG | 1 cut(s) | 364 |
| BseGI | GGATG | 2 cut(s) | 23, 247 |
| BseMII | CTCAG | 2 cut(s) | 339, 344 |
| BseXI | GCAGC | 5 cut(s) | 65, 92, 106, 129, 190 |
| BsiHKCI | CYCGRG | 1 cut(s) | 380 |
| BslFI | GGGAC | 1 cut(s) | 56 |
| BsmFI | GGGAC | 1 cut(s) | 56 |
| BsoBI | CYCGRG | 1 cut(s) | 380 |
| Bsp143I | GATC | 3 cut(s) | 31, 105, 337 |
| BspCNI | CTCAG | 2 cut(s) | 340, 343 |
| BspHI | TCATGA | 1 cut(s) | 148 |
| BspMAI | CTGCAG | 1 cut(s) | 124 |
| BspMI | ACCTGC | 1 cut(s) | 145 |
| BspPI | GGATC | 1 cut(s) | 345 |
| BssMI | GATC | 3 cut(s) | 31, 105, 337 |
| Bst2UI | CCWGG | 1 cut(s) | 364 |
| Bst4CI | ACNGT | 1 cut(s) | 162 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 86 |
| BstC8I | GCNNGC | 1 cut(s) | 117 |
| BstDEI | CTNAG | 2 cut(s) | 330, 348 |
| BstF5I | GGATG | 2 cut(s) | 23, 247 |
| BstKTI | GATC | 3 cut(s) | 34, 108, 340 |
| BstMBI | GATC | 3 cut(s) | 31, 105, 337 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 86, 116, 151 |
| BstNI | CCWGG | 1 cut(s) | 364 |
| BstSCI | CCNGG | 1 cut(s) | 362 |
| BstSFI | CTRYAG | 1 cut(s) | 120 |
| BstV1I | GCAGC | 5 cut(s) | 65, 92, 106, 129, 190 |
| BstX2I | RGATCY | 1 cut(s) | 337 |
| BstYI | RGATCY | 1 cut(s) | 337 |
| BtgZI | GCGATG | 1 cut(s) | 384 |
| BtsCI | GGATG | 2 cut(s) | 23, 247 |
| BtsI | GCAGTG | 1 cut(s) | 198 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| BveI | ACCTGC | 1 cut(s) | 145 |
| Cac8I | GCNNGC | 1 cut(s) | 117 |
| CaiI | CAGNNNCTG | 1 cut(s) | 86 |
| CciI | TCATGA | 1 cut(s) | 148 |
| Csp6I | GTAC | 2 cut(s) | 23, 158 |
| CviAII | CATG | 2 cut(s) | 149, 290 |
| CviJI | RGCY | 6 cut(s) | 56, 83, 103, 119, 317, 352 |
| CviKI_1 | RGCY | 6 cut(s) | 56, 83, 103, 119, 317, 352 |
| CviQI | GTAC | 2 cut(s) | 23, 158 |
| DdeI | CTNAG | 2 cut(s) | 330, 348 |
| DpnI | GATC | 3 cut(s) | 33, 107, 339 |
| DpnII | GATC | 3 cut(s) | 31, 105, 337 |
| Eco88I | CYCGRG | 1 cut(s) | 380 |
| EcoRI | GAATTC | 1 cut(s) | 394 |
| EcoRII | CCWGG | 1 cut(s) | 362 |
| FaeI | CATG | 2 cut(s) | 152, 293 |
| FaiI | YATR | 8 cut(s) | 137, 150, 234, 291, 314, 321, 375, 389 |
| FaqI | GGGAC | 1 cut(s) | 56 |
| FatI | CATG | 2 cut(s) | 148, 289 |
| Fnu4HI | GCNGC | 5 cut(s) | 54, 81, 120, 143, 204 |
| FokI | GGATG | 2 cut(s) | 30, 254 |
| Fsp4HI | GCNGC | 5 cut(s) | 54, 81, 120, 143, 204 |
| GluI | GCNGC | 5 cut(s) | 54, 81, 120, 143, 204 |
| Hin1II | CATG | 2 cut(s) | 152, 293 |
| Hpy166II | GTNNAC | 2 cut(s) | 23, 179 |
| Hpy188I | TCNGA | 3 cut(s) | 29, 333, 349 |
| Hpy188III | TCNNGA | 2 cut(s) | 149, 380 |
| Hpy8I | GTNNAC | 2 cut(s) | 23, 179 |
| HpyCH4III | ACNGT | 1 cut(s) | 162 |
| HpyCH4V | TGCA | 4 cut(s) | 80, 115, 122, 145 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 86, 116, 151 |
| HpyF3I | CTNAG | 2 cut(s) | 330, 348 |
| Hsp92II | CATG | 2 cut(s) | 152, 293 |
| Kzo9I | GATC | 3 cut(s) | 31, 105, 337 |
| LmnI | GCTCC | 1 cut(s) | 382 |
| LpnPI | CCDG | 4 cut(s) | 35, 140, 349, 376 |
| Lsp1109I | GCAGC | 5 cut(s) | 65, 92, 106, 129, 190 |
| LweI | GCATC | 2 cut(s) | 154, 205 |
| MaeIII | GTNAC | 1 cut(s) | 292 |
| MalI | GATC | 3 cut(s) | 33, 107, 339 |
| MboI | GATC | 3 cut(s) | 31, 105, 337 |
| MboII | GAAGA | 3 cut(s) | 76, 224, 332 |
| MfeI | CAATTG | 1 cut(s) | 222 |
| MflI | RGATCY | 1 cut(s) | 337 |
| MluCI | AATT | 4 cut(s) | 222, 265, 394, 405 |
| MnlI | CCTC | 2 cut(s) | 94, 238 |
| MspR9I | CCNGG | 1 cut(s) | 364 |
| MunI | CAATTG | 1 cut(s) | 222 |
| MvaI | CCWGG | 1 cut(s) | 364 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 86, 116, 151 |
| NdeII | GATC | 3 cut(s) | 31, 105, 337 |
| NlaIII | CATG | 2 cut(s) | 152, 293 |
| PagI | TCATGA | 1 cut(s) | 148 |
| PkrI | GCNGC | 5 cut(s) | 55, 82, 121, 144, 205 |
| PsiI | TTATAA | 1 cut(s) | 389 |
| Psp6I | CCWGG | 1 cut(s) | 362 |
| PspGI | CCWGG | 1 cut(s) | 362 |
| PstI | CTGCAG | 1 cut(s) | 124 |
| PstNI | CAGNNNCTG | 1 cut(s) | 86 |
| PsuI | RGATCY | 1 cut(s) | 337 |
| RsaI | GTAC | 2 cut(s) | 24, 159 |
| RsaNI | GTAC | 2 cut(s) | 23, 158 |
| SatI | GCNGC | 5 cut(s) | 54, 81, 120, 143, 204 |
| Sau3AI | GATC | 3 cut(s) | 31, 105, 337 |
| ScrFI | CCNGG | 1 cut(s) | 364 |
| SetI | ASST | 7 cut(s) | 58, 105, 121, 159, 249, 319, 354 |
| SfaNI | GCATC | 2 cut(s) | 154, 205 |
| SfcI | CTRYAG | 1 cut(s) | 120 |
| Sse9I | AATT | 4 cut(s) | 222, 265, 394, 405 |
| StyD4I | CCNGG | 1 cut(s) | 362 |
| TaaI | ACNGT | 1 cut(s) | 162 |
| TaqI | TCGA | 1 cut(s) | 99 |
| TasI | AATT | 4 cut(s) | 222, 265, 394, 405 |
| TatI | WGTACW | 1 cut(s) | 22 |
| TscAI | CASTG | 1 cut(s) | 205 |
| TseI | GCWGC | 5 cut(s) | 53, 80, 119, 142, 203 |
| TspDTI | ATGAA | 4 cut(s) | 17, 225, 332, 387 |
| TspRI | CASTG | 1 cut(s) | 205 |
| XapI | RAATTY | 1 cut(s) | 394 |