Reverse transcriptase-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 81 - 185 | 2.3e-19 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 61 |
| AbsI | CCTCGAGG | 1 cut(s) | 222 |
| AccB1I | GGYRCC | 1 cut(s) | 199 |
| AccBSI | CCGCTC | 1 cut(s) | 197 |
| AciI | CCGC | 1 cut(s) | 197 |
| AcsI | RAATTY | 1 cut(s) | 504 |
| AcuI | CTGAAG | 1 cut(s) | 188 |
| AcyI | GRCGYC | 1 cut(s) | 200 |
| AfaI | GTAC | 1 cut(s) | 149 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 224 |
| AgsI | TTSAA | 2 cut(s) | 319, 431 |
| AjnI | CCWGG | 1 cut(s) | 326 |
| AluBI | AGCT | 2 cut(s) | 315, 354 |
| AluI | AGCT | 2 cut(s) | 315, 354 |
| Ama87I | CYCGRG | 1 cut(s) | 222 |
| ApeKI | GCWGC | 1 cut(s) | 461 |
| ApoI | RAATTY | 1 cut(s) | 504 |
| AspLEI | GCGC | 1 cut(s) | 202 |
| AspS9I | GGNCC | 2 cut(s) | 96, 330 |
| AvaI | CYCGRG | 1 cut(s) | 222 |
| AvaII | GGWCC | 2 cut(s) | 96, 330 |
| BanI | GGYRCC | 1 cut(s) | 199 |
| BbvI | GCAGC | 1 cut(s) | 448 |
| BccI | CCATC | 3 cut(s) | 242, 263, 411 |
| BciT130I | CCWGG | 1 cut(s) | 328 |
| BfaI | CTAG | 1 cut(s) | 401 |
| BfoI | RGCGCY | 1 cut(s) | 203 |
| BisI | GCNGC | 2 cut(s) | 198, 462 |
| BlsI | GCNGC | 2 cut(s) | 199, 463 |
| Bme1390I | CCNGG | 1 cut(s) | 328 |
| Bme18I | GGWCC | 2 cut(s) | 96, 330 |
| BmeT110I | CYCGRG | 1 cut(s) | 222 |
| BmgT120I | GGNCC | 2 cut(s) | 96, 330 |
| BmiI | GGNNCC | 3 cut(s) | 97, 201, 325 |
| BmrFI | CCNGG | 1 cut(s) | 328 |
| BmsI | GCATC | 3 cut(s) | 219, 327, 406 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 216, 248 |
| BsaBI | GATNNNNATC | 1 cut(s) | 8 |
| BsaHI | GRCGYC | 1 cut(s) | 200 |
| BsaJI | CCNNGG | 1 cut(s) | 375 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 224 |
| Bse1I | ACTGG | 1 cut(s) | 313 |
| Bse8I | GATNNNNATC | 1 cut(s) | 8 |
| BseBI | CCWGG | 1 cut(s) | 328 |
| BseDI | CCNNGG | 1 cut(s) | 375 |
| BseGI | GGATG | 4 cut(s) | 216, 234, 253, 422 |
| BseJI | GATNNNNATC | 1 cut(s) | 8 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BseMII | CTCAG | 2 cut(s) | 135, 504 |
| BseNI | ACTGG | 1 cut(s) | 313 |
| BseRI | GAGGAG | 1 cut(s) | 207 |
| BseXI | GCAGC | 1 cut(s) | 448 |
| BsgI | GTGCAG | 1 cut(s) | 342 |
| BshNI | GGYRCC | 1 cut(s) | 199 |
| BsiHKCI | CYCGRG | 1 cut(s) | 222 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 224 |
| BsoBI | CYCGRG | 1 cut(s) | 222 |
| BspACI | CCGC | 1 cut(s) | 197 |
| BspCNI | CTCAG | 2 cut(s) | 136, 503 |
| BspLI | GGNNCC | 3 cut(s) | 97, 201, 325 |
| BspT107I | GGYRCC | 1 cut(s) | 199 |
| BsrBI | CCGCTC | 1 cut(s) | 197 |
| BsrI | ACTGG | 1 cut(s) | 313 |
| BssECI | CCNNGG | 1 cut(s) | 375 |
| BssNI | GRCGYC | 1 cut(s) | 200 |
| Bst2UI | CCWGG | 1 cut(s) | 328 |
| Bst6I | CTCTTC | 1 cut(s) | 164 |
| BstACI | GRCGYC | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 2 cut(s) | 114, 382 |
| BstDEI | CTNAG | 2 cut(s) | 144, 490 |
| BstF5I | GGATG | 4 cut(s) | 216, 234, 253, 422 |
| BstH2I | RGCGCY | 1 cut(s) | 203 |
| BstHHI | GCGC | 1 cut(s) | 202 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 386 |
| BstNI | CCWGG | 1 cut(s) | 328 |
| BstNSI | RCATGY | 1 cut(s) | 116 |
| BstSCI | CCNGG | 1 cut(s) | 326 |
| BstV1I | GCAGC | 1 cut(s) | 448 |
| BtsCI | GGATG | 4 cut(s) | 216, 234, 253, 422 |
| BtsI | GCAGTG | 1 cut(s) | 280 |
| BtsIMutI | CAGTG | 2 cut(s) | 164, 280 |
| Cac8I | GCNNGC | 2 cut(s) | 114, 382 |
| CfoI | GCGC | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 2 cut(s) | 96, 330 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviAII | CATG | 3 cut(s) | 109, 113, 413 |
| CviJI | RGCY | 7 cut(s) | 128, 143, 315, 326, 354, 374, 380 |
| CviKI_1 | RGCY | 7 cut(s) | 128, 143, 315, 326, 354, 374, 380 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 2 cut(s) | 144, 490 |
| DinI | GGCGCC | 1 cut(s) | 201 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 61 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 61 |
| Eam1104I | CTCTTC | 1 cut(s) | 164 |
| EarI | CTCTTC | 1 cut(s) | 164 |
| Eco32I | GATATC | 1 cut(s) | 10 |
| Eco47I | GGWCC | 2 cut(s) | 96, 330 |
| Eco57I | CTGAAG | 1 cut(s) | 188 |
| Eco88I | CYCGRG | 1 cut(s) | 222 |
| EcoO109I | RGGNCCY | 1 cut(s) | 96 |
| EcoRII | CCWGG | 1 cut(s) | 326 |
| EcoRV | GATATC | 1 cut(s) | 10 |
| EcoT22I | ATGCAT | 2 cut(s) | 114, 135 |
| EgeI | GGCGCC | 1 cut(s) | 201 |
| EheI | GGCGCC | 1 cut(s) | 201 |
| FaeI | CATG | 3 cut(s) | 112, 116, 416 |
| FatI | CATG | 3 cut(s) | 108, 112, 412 |
| Fnu4HI | GCNGC | 2 cut(s) | 198, 462 |
| FokI | GGATG | 4 cut(s) | 223, 241, 260, 429 |
| Fsp4HI | GCNGC | 2 cut(s) | 198, 462 |
| FspBI | CTAG | 1 cut(s) | 401 |
| GlaI | GCGC | 1 cut(s) | 201 |
| GluI | GCNGC | 2 cut(s) | 198, 462 |
| HaeII | RGCGCY | 1 cut(s) | 203 |
| HhaI | GCGC | 1 cut(s) | 202 |
| Hin1I | GRCGYC | 1 cut(s) | 200 |
| Hin1II | CATG | 3 cut(s) | 112, 116, 416 |
| Hin6I | GCGC | 1 cut(s) | 200 |
| HinP1I | GCGC | 1 cut(s) | 200 |
| HinfI | GANTC | 2 cut(s) | 172, 469 |
| Hpy166II | GTNNAC | 1 cut(s) | 481 |
| Hpy188I | TCNGA | 3 cut(s) | 67, 268, 493 |
| Hpy188III | TCNNGA | 1 cut(s) | 509 |
| Hpy8I | GTNNAC | 1 cut(s) | 481 |
| HpyCH4V | TGCA | 7 cut(s) | 112, 116, 133, 359, 384, 397, 532 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 386 |
| HpyF3I | CTNAG | 2 cut(s) | 144, 490 |
| Hsp92I | GRCGYC | 1 cut(s) | 200 |
| Hsp92II | CATG | 3 cut(s) | 112, 116, 416 |
| HspAI | GCGC | 1 cut(s) | 200 |
| KasI | GGCGCC | 1 cut(s) | 199 |
| LmnI | GCTCC | 2 cut(s) | 194, 323 |
| LpnPI | CCDG | 3 cut(s) | 294, 313, 340 |
| Lsp1109I | GCAGC | 1 cut(s) | 448 |
| LweI | GCATC | 3 cut(s) | 219, 327, 406 |
| MaeI | CTAG | 1 cut(s) | 401 |
| MbiI | CCGCTC | 1 cut(s) | 197 |
| MboII | GAAGA | 2 cut(s) | 181, 335 |
| MluCI | AATT | 4 cut(s) | 26, 77, 432, 504 |
| Mly113I | GGCGCC | 1 cut(s) | 200 |
| MlyI | GAGTC | 1 cut(s) | 181 |
| MnlI | CCTC | 5 cut(s) | 167, 185, 218, 231, 370 |
| Mph1103I | ATGCAT | 2 cut(s) | 114, 135 |
| MseI | TTAA | 3 cut(s) | 102, 240, 350 |
| MspR9I | CCNGG | 1 cut(s) | 328 |
| MvaI | CCWGG | 1 cut(s) | 328 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 386 |
| NarI | GGCGCC | 1 cut(s) | 200 |
| NlaIII | CATG | 3 cut(s) | 112, 116, 416 |
| NlaIV | GGNNCC | 3 cut(s) | 97, 201, 325 |
| NmeAIII | GCCGAG | 1 cut(s) | 400 |
| NsiI | ATGCAT | 2 cut(s) | 114, 135 |
| NspI | RCATGY | 1 cut(s) | 116 |
| PaeI | GCATGC | 1 cut(s) | 116 |
| PaeR7I | CTCGAG | 1 cut(s) | 222 |
| PfeI | GAWTC | 1 cut(s) | 469 |
| PkrI | GCNGC | 2 cut(s) | 199, 463 |
| PleI | GAGTC | 1 cut(s) | 180 |
| PluTI | GGCGCC | 1 cut(s) | 203 |
| PpsI | GAGTC | 1 cut(s) | 180 |
| PpuMI | RGGWCCY | 1 cut(s) | 96 |
| Psp5II | RGGWCCY | 1 cut(s) | 96 |
| Psp6I | CCWGG | 1 cut(s) | 326 |
| PspGI | CCWGG | 1 cut(s) | 326 |
| PspN4I | GGNNCC | 3 cut(s) | 97, 201, 325 |
| PspPI | GGNCC | 2 cut(s) | 96, 330 |
| PspPPI | RGGWCCY | 1 cut(s) | 96 |
| PspXI | VCTCGAGB | 1 cut(s) | 222 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| SaqAI | TTAA | 3 cut(s) | 102, 240, 350 |
| SatI | GCNGC | 2 cut(s) | 198, 462 |
| Sau96I | GGNCC | 2 cut(s) | 96, 330 |
| SchI | GAGTC | 1 cut(s) | 181 |
| ScrFI | CCNGG | 1 cut(s) | 328 |
| SetI | ASST | 3 cut(s) | 223, 317, 356 |
| SfaNI | GCATC | 3 cut(s) | 219, 327, 406 |
| SfoI | GGCGCC | 1 cut(s) | 201 |
| Sfr274I | CTCGAG | 1 cut(s) | 222 |
| SinI | GGWCC | 2 cut(s) | 96, 330 |
| SlaI | CTCGAG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 1 cut(s) | 222 |
| SmoI | CTYRAG | 1 cut(s) | 222 |
| SphI | GCATGC | 1 cut(s) | 116 |
| Sse9I | AATT | 4 cut(s) | 26, 77, 432, 504 |
| SsiI | CCGC | 1 cut(s) | 197 |
| SspDI | GGCGCC | 1 cut(s) | 199 |
| SspMI | CTAG | 1 cut(s) | 401 |
| StyD4I | CCNGG | 1 cut(s) | 326 |
| TaqI | TCGA | 1 cut(s) | 223 |
| TasI | AATT | 4 cut(s) | 26, 77, 432, 504 |
| TauI | GCSGC | 1 cut(s) | 200 |
| TfiI | GAWTC | 1 cut(s) | 469 |
| Tru1I | TTAA | 3 cut(s) | 102, 240, 350 |
| Tru9I | TTAA | 3 cut(s) | 102, 240, 350 |
| TscAI | CASTG | 2 cut(s) | 171, 280 |
| TseI | GCWGC | 1 cut(s) | 461 |
| TspDTI | ATGAA | 4 cut(s) | 28, 335, 353, 482 |
| TspRI | CASTG | 2 cut(s) | 171, 280 |
| VpaK11BI | GGWCC | 2 cut(s) | 96, 330 |
| XapI | RAATTY | 1 cut(s) | 504 |
| XceI | RCATGY | 1 cut(s) | 116 |
| XhoI | CTCGAG | 1 cut(s) | 222 |
| XspI | CTAG | 1 cut(s) | 401 |
| Zsp2I | ATGCAT | 2 cut(s) | 114, 135 |