Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| AatII | GACGTC | 1 cut(s) | 996 |
| Acc16I | TGCGCA | 1 cut(s) | 1113 |
| Acc65I | GGTACC | 1 cut(s) | 715 |
| AccB1I | GGYRCC | 2 cut(s) | 715, 788 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 242 |
| AccBSI | CCGCTC | 1 cut(s) | 171 |
| AccII | CGCG | 1 cut(s) | 99 |
| AciI | CCGC | 5 cut(s) | 107, 166, 169, 456, 555 |
| AclWI | GGATC | 2 cut(s) | 374, 1034 |
| AcoI | YGGCCR | 1 cut(s) | 566 |
| AcsI | RAATTY | 1 cut(s) | 698 |
| AcvI | CACGTG | 1 cut(s) | 182 |
| AcyI | GRCGYC | 1 cut(s) | 993 |
| AfaI | GTAC | 6 cut(s) | 122, 208, 485, 717, 763, 1273 |
| AfeI | AGCGCT | 1 cut(s) | 389 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 242 |
| AflII | CTTAAG | 1 cut(s) | 28 |
| AflIII | ACRYGT | 2 cut(s) | 825, 1152 |
| AgeI | ACCGGT | 1 cut(s) | 280 |
| AgsI | TTSAA | 5 cut(s) | 358, 443, 848, 1141, 1150 |
| AjiI | CACGTC | 2 cut(s) | 723, 1210 |
| AjnI | CCWGG | 3 cut(s) | 116, 976, 1245 |
| AleI | CACNNNNGTG | 1 cut(s) | 479 |
| AluBI | AGCT | 8 cut(s) | 14, 33, 66, 150, 302, 530, 728, 1292 |
| AluI | AGCT | 8 cut(s) | 14, 33, 66, 150, 302, 530, 728, 1292 |
| Alw21I | GWGCWC | 1 cut(s) | 187 |
| Alw26I | GTCTC | 5 cut(s) | 530, 781, 799, 865, 1003 |
| Alw44I | GTGCAC | 1 cut(s) | 183 |
| AlwI | GGATC | 2 cut(s) | 374, 1034 |
| Ama87I | CYCGRG | 1 cut(s) | 516 |
| Aor51HI | AGCGCT | 1 cut(s) | 389 |
| AoxI | GGCC | 1 cut(s) | 566 |
| ApaLI | GTGCAC | 1 cut(s) | 183 |
| ApeKI | GCWGC | 2 cut(s) | 11, 911 |
| ApoI | RAATTY | 1 cut(s) | 698 |
| AseI | ATTAAT | 1 cut(s) | 1020 |
| AsiGI | ACCGGT | 1 cut(s) | 280 |
| Asp718I | GGTACC | 1 cut(s) | 715 |
| AspLEI | GCGC | 4 cut(s) | 99, 390, 659, 1114 |
| AspS9I | GGNCC | 3 cut(s) | 327, 463, 662 |
| AsuC2I | CCSGG | 1 cut(s) | 952 |
| AsuHPI | GGTGA | 3 cut(s) | 96, 482, 535 |
| AsuNHI | GCTAGC | 1 cut(s) | 62 |
| AvaI | CYCGRG | 1 cut(s) | 516 |
| AvaII | GGWCC | 3 cut(s) | 327, 463, 662 |
| BaeGI | GKGCMC | 1 cut(s) | 187 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 707, 740 |
| BanI | GGYRCC | 2 cut(s) | 715, 788 |
| BbrPI | CACGTG | 1 cut(s) | 182 |
| Bbv12I | GWGCWC | 1 cut(s) | 187 |
| BbvI | GCAGC | 2 cut(s) | 23, 898 |
| BccI | CCATC | 3 cut(s) | 182, 275, 554 |
| BceAI | ACGGC | 1 cut(s) | 776 |
| BciT130I | CCWGG | 3 cut(s) | 118, 978, 1247 |
| BclI | TGATCA | 1 cut(s) | 1081 |
| BcnI | CCSGG | 1 cut(s) | 952 |
| BcoDI | GTCTC | 5 cut(s) | 530, 781, 799, 865, 1003 |
| BfaI | CTAG | 4 cut(s) | 63, 527, 806, 1161 |
| BfoI | RGCGCY | 2 cut(s) | 391, 660 |
| BfrI | CTTAAG | 1 cut(s) | 28 |
| BisI | GCNGC | 3 cut(s) | 12, 169, 912 |
| BlsI | GCNGC | 3 cut(s) | 13, 170, 913 |
| BmcAI | AGTACT | 1 cut(s) | 1273 |
| Bme1390I | CCNGG | 4 cut(s) | 118, 952, 978, 1247 |
| Bme18I | GGWCC | 3 cut(s) | 327, 463, 662 |
| BmeT110I | CYCGRG | 1 cut(s) | 516 |
| BmgBI | CACGTC | 2 cut(s) | 723, 1210 |
| BmgT120I | GGNCC | 3 cut(s) | 327, 463, 662 |
| BmiI | GGNNCC | 7 cut(s) | 274, 329, 464, 553, 637, 717, 790 |
| BmrFI | CCNGG | 4 cut(s) | 118, 952, 978, 1247 |
| BmtI | GCTAGC | 1 cut(s) | 66 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 514, 546, 620, 652 |
| Bpu10I | CCTNAGC | 2 cut(s) | 384, 531 |
| BpuEI | CTTGAG | 1 cut(s) | 1283 |
| BpuMI | CCSGG | 1 cut(s) | 952 |
| BsaAI | YACGTR | 2 cut(s) | 182, 399 |
| BsaBI | GATNNNNATC | 1 cut(s) | 260 |
| BsaHI | GRCGYC | 1 cut(s) | 993 |
| BsaI | GGTCTC | 1 cut(s) | 530 |
| BsaJI | CCNNGG | 3 cut(s) | 116, 466, 977 |
| BsaWI | WCCGGW | 2 cut(s) | 280, 560 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 416, 446 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 242 |
| Bse118I | RCCGGY | 2 cut(s) | 280, 568 |
| Bse1I | ACTGG | 1 cut(s) | 915 |
| Bse3DI | GCAATG | 1 cut(s) | 356 |
| Bse8I | GATNNNNATC | 1 cut(s) | 260 |
| BseBI | CCWGG | 3 cut(s) | 118, 978, 1247 |
| BseDI | CCNNGG | 3 cut(s) | 116, 466, 977 |
| BseGI | GGATG | 2 cut(s) | 128, 1177 |
| BseJI | GATNNNNATC | 1 cut(s) | 260 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BseMI | GCAATG | 1 cut(s) | 356 |
| BseMII | CTCAG | 3 cut(s) | 545, 792, 1046 |
| BseNI | ACTGG | 1 cut(s) | 915 |
| BseRI | GAGGAG | 2 cut(s) | 382, 792 |
| BseSI | GKGCMC | 1 cut(s) | 187 |
| BseX3I | CGGCCG | 1 cut(s) | 566 |
| BseXI | GCAGC | 2 cut(s) | 23, 898 |
| Bsh1236I | CGCG | 1 cut(s) | 99 |
| Bsh1285I | CGRYCG | 2 cut(s) | 565, 569 |
| BshFI | GGCC | 1 cut(s) | 568 |
| BshNI | GGYRCC | 2 cut(s) | 715, 788 |
| BshTI | ACCGGT | 1 cut(s) | 280 |
| BsiEI | CGRYCG | 2 cut(s) | 565, 569 |
| BsiHKAI | GWGCWC | 1 cut(s) | 187 |
| BsiHKCI | CYCGRG | 1 cut(s) | 516 |
| BsiSI | CCGG | 7 cut(s) | 281, 561, 569, 633, 639, 768, 951 |
| BslFI | GGGAC | 5 cut(s) | 218, 395, 476, 967, 1082 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 242 |
| BsmAI | GTCTC | 5 cut(s) | 530, 781, 799, 865, 1003 |
| BsmBI | CGTCTC | 2 cut(s) | 799, 1003 |
| BsmFI | GGGAC | 5 cut(s) | 218, 395, 476, 967, 1082 |
| BsnI | GGCC | 1 cut(s) | 568 |
| Bso31I | GGTCTC | 1 cut(s) | 530 |
| BsoBI | CYCGRG | 1 cut(s) | 516 |
| Bsp1286I | GDGCHC | 1 cut(s) | 187 |
| Bsp1407I | TGTACA | 1 cut(s) | 483 |
| Bsp143I | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| BspACI | CCGC | 5 cut(s) | 107, 166, 169, 456, 555 |
| BspANI | GGCC | 1 cut(s) | 568 |
| BspCNI | CTCAG | 3 cut(s) | 544, 791, 1047 |
| BspFNI | CGCG | 1 cut(s) | 99 |
| BspHI | TCATGA | 1 cut(s) | 1084 |
| BspLI | GGNNCC | 7 cut(s) | 274, 329, 464, 553, 637, 717, 790 |
| BspOI | GCTAGC | 1 cut(s) | 66 |
| BspPI | GGATC | 2 cut(s) | 374, 1034 |
| BspT107I | GGYRCC | 2 cut(s) | 715, 788 |
| BspTI | CTTAAG | 1 cut(s) | 28 |
| BspTNI | GGTCTC | 1 cut(s) | 530 |
| BsrBI | CCGCTC | 1 cut(s) | 171 |
| BsrDI | GCAATG | 1 cut(s) | 356 |
| BsrFI | RCCGGY | 2 cut(s) | 280, 568 |
| BsrGI | TGTACA | 1 cut(s) | 483 |
| BsrI | ACTGG | 1 cut(s) | 915 |
| BssAI | RCCGGY | 2 cut(s) | 280, 568 |
| BssECI | CCNNGG | 3 cut(s) | 116, 466, 977 |
| BssMI | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| BssNI | GRCGYC | 1 cut(s) | 993 |
| Bst2UI | CCWGG | 3 cut(s) | 118, 978, 1247 |
| Bst4CI | ACNGT | 7 cut(s) | 82, 470, 488, 614, 788, 923, 1276 |
| Bst6I | CTCTTC | 1 cut(s) | 380 |
| BstACI | GRCGYC | 1 cut(s) | 993 |
| BstAFI | CTTAAG | 1 cut(s) | 28 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 342, 351 |
| BstAUI | TGTACA | 1 cut(s) | 483 |
| BstBAI | YACGTR | 2 cut(s) | 182, 399 |
| BstC8I | GCNNGC | 7 cut(s) | 25, 64, 152, 338, 347, 745, 1290 |
| BstDEI | CTNAG | 5 cut(s) | 384, 531, 778, 900, 1055 |
| BstDSI | CCRYGG | 1 cut(s) | 466 |
| BstF5I | GGATG | 2 cut(s) | 128, 1177 |
| BstFNI | CGCG | 1 cut(s) | 99 |
| BstH2I | RGCGCY | 2 cut(s) | 391, 660 |
| BstHHI | GCGC | 4 cut(s) | 99, 390, 659, 1114 |
| BstKTI | GATC | 8 cut(s) | 88, 319, 382, 505, 648, 1042, 1084, 1218 |
| BstMAI | GTCTC | 5 cut(s) | 530, 781, 799, 865, 1003 |
| BstMBI | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| BstMCI | CGRYCG | 2 cut(s) | 565, 569 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 342, 346, 351, 911, 967, 1022 |
| BstNI | CCWGG | 3 cut(s) | 118, 978, 1247 |
| BstNSI | RCATGY | 1 cut(s) | 27 |
| BstSCI | CCNGG | 4 cut(s) | 116, 950, 976, 1245 |
| BstSLI | GKGCMC | 1 cut(s) | 187 |
| BstUI | CGCG | 1 cut(s) | 99 |
| BstV1I | GCAGC | 2 cut(s) | 23, 898 |
| BstZI | CGGCCG | 1 cut(s) | 566 |
| BsuRI | GGCC | 1 cut(s) | 568 |
| BtgI | CCRYGG | 1 cut(s) | 466 |
| BtrI | CACGTC | 2 cut(s) | 723, 1210 |
| BtsCI | GGATG | 2 cut(s) | 128, 1177 |
| BtsI | GCAGTG | 2 cut(s) | 319, 1107 |
| BtsIMutI | CAGTG | 3 cut(s) | 78, 319, 1107 |
| Cac8I | GCNNGC | 7 cut(s) | 25, 64, 152, 338, 347, 745, 1290 |
| CciI | TCATGA | 1 cut(s) | 1084 |
| CfoI | GCGC | 4 cut(s) | 99, 390, 659, 1114 |
| Cfr10I | RCCGGY | 2 cut(s) | 280, 568 |
| Cfr13I | GGNCC | 3 cut(s) | 327, 463, 662 |
| Csp6I | GTAC | 6 cut(s) | 121, 207, 484, 716, 762, 1272 |
| CspAI | ACCGGT | 1 cut(s) | 280 |
| CviAII | CATG | 5 cut(s) | 24, 342, 429, 605, 1085 |
| CviQI | GTAC | 6 cut(s) | 121, 207, 484, 716, 762, 1272 |
| DdeI | CTNAG | 5 cut(s) | 384, 531, 778, 900, 1055 |
| DpnI | GATC | 8 cut(s) | 87, 318, 381, 504, 647, 1041, 1083, 1217 |
| DpnII | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1094 |
| EaeI | YGGCCR | 1 cut(s) | 566 |
| EagI | CGGCCG | 1 cut(s) | 566 |
| Eam1104I | CTCTTC | 1 cut(s) | 380 |
| EarI | CTCTTC | 1 cut(s) | 380 |
| EciI | GGCGGA | 1 cut(s) | 155 |
| EclXI | CGGCCG | 1 cut(s) | 566 |
| Eco31I | GGTCTC | 1 cut(s) | 530 |
| Eco47I | GGWCC | 3 cut(s) | 327, 463, 662 |
| Eco47III | AGCGCT | 1 cut(s) | 389 |
| Eco52I | CGGCCG | 1 cut(s) | 566 |
| Eco72I | CACGTG | 1 cut(s) | 182 |
| Eco88I | CYCGRG | 1 cut(s) | 516 |
| EcoRII | CCWGG | 3 cut(s) | 116, 976, 1245 |
| Esp3I | CGTCTC | 2 cut(s) | 799, 1003 |
| FaeI | CATG | 5 cut(s) | 27, 345, 432, 608, 1088 |
| FaqI | GGGAC | 5 cut(s) | 218, 395, 476, 967, 1082 |
| FatI | CATG | 5 cut(s) | 23, 341, 428, 604, 1084 |
| FbaI | TGATCA | 1 cut(s) | 1081 |
| Fnu4HI | GCNGC | 3 cut(s) | 12, 169, 912 |
| FokI | GGATG | 2 cut(s) | 115, 1184 |
| Fsp4HI | GCNGC | 3 cut(s) | 12, 169, 912 |
| FspBI | CTAG | 4 cut(s) | 63, 527, 806, 1161 |
| FspI | TGCGCA | 1 cut(s) | 1113 |
| GlaI | GCGC | 4 cut(s) | 98, 389, 658, 1113 |
| GluI | GCNGC | 3 cut(s) | 12, 169, 912 |
| HaeII | RGCGCY | 2 cut(s) | 391, 660 |
| HaeIII | GGCC | 1 cut(s) | 568 |
| HapII | CCGG | 7 cut(s) | 281, 561, 569, 633, 639, 768, 951 |
| HhaI | GCGC | 4 cut(s) | 99, 390, 659, 1114 |
| Hin1I | GRCGYC | 1 cut(s) | 993 |
| Hin1II | CATG | 5 cut(s) | 27, 345, 432, 608, 1088 |
| Hin6I | GCGC | 4 cut(s) | 97, 388, 657, 1112 |
| HinP1I | GCGC | 4 cut(s) | 97, 388, 657, 1112 |
| HindIII | AAGCTT | 1 cut(s) | 31 |
| HinfI | GANTC | 9 cut(s) | 101, 125, 221, 405, 523, 629, 947, 1057, 1195 |
| HpaII | CCGG | 7 cut(s) | 281, 561, 569, 633, 639, 768, 951 |
| HphI | GGTGA | 3 cut(s) | 96, 482, 535 |
| Hpy166II | GTNNAC | 5 cut(s) | 185, 484, 513, 602, 665 |
| Hpy188I | TCNGA | 7 cut(s) | 272, 296, 582, 1044, 1056, 1204, 1223 |
| Hpy188III | TCNNGA | 5 cut(s) | 325, 440, 533, 845, 1085 |
| Hpy8I | GTNNAC | 5 cut(s) | 185, 484, 513, 602, 665 |
| Hpy99I | CGWCG | 2 cut(s) | 995, 998 |
| HpyAV | CCTTC | 3 cut(s) | 550, 587, 1039 |
| HpyCH4III | ACNGT | 7 cut(s) | 82, 470, 488, 614, 788, 923, 1276 |
| HpyCH4IV | ACGT | 7 cut(s) | 181, 398, 722, 827, 993, 1154, 1209 |
| HpyCH4V | TGCA | 8 cut(s) | 23, 154, 185, 336, 345, 743, 1025, 1299 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 342, 346, 351, 911, 967, 1022 |
| HpyF3I | CTNAG | 5 cut(s) | 384, 531, 778, 900, 1055 |
| HpySE526I | ACGT | 7 cut(s) | 181, 398, 722, 827, 993, 1154, 1209 |
| Hsp92I | GRCGYC | 1 cut(s) | 993 |
| Hsp92II | CATG | 5 cut(s) | 27, 345, 432, 608, 1088 |
| HspAI | GCGC | 4 cut(s) | 97, 388, 657, 1112 |
| KpnI | GGTACC | 1 cut(s) | 719 |
| Ksp22I | TGATCA | 1 cut(s) | 1081 |
| Kzo9I | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| LmnI | GCTCC | 5 cut(s) | 176, 395, 437, 557, 641 |
| Lsp1109I | GCAGC | 2 cut(s) | 23, 898 |
| MaeI | CTAG | 4 cut(s) | 63, 527, 806, 1161 |
| MaeII | ACGT | 7 cut(s) | 181, 398, 722, 827, 993, 1154, 1209 |
| MaeIII | GTNAC | 3 cut(s) | 470, 917, 932 |
| MalI | GATC | 8 cut(s) | 87, 318, 381, 504, 647, 1041, 1083, 1217 |
| MbiI | CCGCTC | 1 cut(s) | 171 |
| MboI | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| MboII | GAAGA | 4 cut(s) | 32, 367, 455, 1210 |
| MhlI | GDGCHC | 1 cut(s) | 187 |
| MluCI | AATT | 2 cut(s) | 698, 852 |
| MlyI | GAGTC | 6 cut(s) | 95, 119, 532, 638, 941, 1066 |
| MmeI | TCCRAC | 2 cut(s) | 447, 841 |
| MseI | TTAA | 3 cut(s) | 29, 1020, 1284 |
| MslI | CAYNNNNRTG | 2 cut(s) | 479, 1119 |
| MspA1I | CMGCKG | 1 cut(s) | 1292 |
| MspCI | CTTAAG | 1 cut(s) | 28 |
| MspI | CCGG | 7 cut(s) | 281, 561, 569, 633, 639, 768, 951 |
| MspR9I | CCNGG | 4 cut(s) | 118, 952, 978, 1247 |
| MvaI | CCWGG | 3 cut(s) | 118, 978, 1247 |
| MvnI | CGCG | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 11, 20, 342, 346, 351, 911, 967, 1022 |
| NciI | CCSGG | 1 cut(s) | 952 |
| NdeII | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| NheI | GCTAGC | 1 cut(s) | 62 |
| NlaIII | CATG | 5 cut(s) | 27, 345, 432, 608, 1088 |
| NlaIV | GGNNCC | 7 cut(s) | 274, 329, 464, 553, 637, 717, 790 |
| NmeAIII | GCCGAG | 1 cut(s) | 980 |
| NmuCI | GTSAC | 1 cut(s) | 470 |
| NsbI | TGCGCA | 1 cut(s) | 1113 |
| NspI | RCATGY | 1 cut(s) | 27 |
| OliI | CACNNNNGTG | 1 cut(s) | 479 |
| PaeI | GCATGC | 1 cut(s) | 27 |
| PagI | TCATGA | 1 cut(s) | 1084 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 187, 1196 |
| PfeI | GAWTC | 3 cut(s) | 221, 405, 1195 |
| PflFI | GACNNNGTC | 1 cut(s) | 995 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 242 |
| PfoI | TCCNGGA | 1 cut(s) | 950 |
| PinAI | ACCGGT | 1 cut(s) | 280 |
| PkrI | GCNGC | 3 cut(s) | 13, 170, 913 |
| PleI | GAGTC | 6 cut(s) | 95, 119, 531, 637, 941, 1065 |
| PmaCI | CACGTG | 1 cut(s) | 182 |
| PmlI | CACGTG | 1 cut(s) | 182 |
| PpsI | GAGTC | 6 cut(s) | 95, 119, 531, 637, 941, 1065 |
| Ppu21I | YACGTR | 2 cut(s) | 182, 399 |
| PshBI | ATTAAT | 1 cut(s) | 1020 |
| Psp6I | CCWGG | 3 cut(s) | 116, 976, 1245 |
| PspCI | CACGTG | 1 cut(s) | 182 |
| PspGI | CCWGG | 3 cut(s) | 116, 976, 1245 |
| PspN4I | GGNNCC | 7 cut(s) | 274, 329, 464, 553, 637, 717, 790 |
| PspPI | GGNCC | 3 cut(s) | 327, 463, 662 |
| PsyI | GACNNNGTC | 1 cut(s) | 995 |
| PvuII | CAGCTG | 1 cut(s) | 1292 |
| RsaI | GTAC | 6 cut(s) | 122, 208, 485, 717, 763, 1273 |
| RsaNI | GTAC | 6 cut(s) | 121, 207, 484, 716, 762, 1272 |
| RseI | CAYNNNNRTG | 2 cut(s) | 479, 1119 |
| SaqAI | TTAA | 3 cut(s) | 29, 1020, 1284 |
| SatI | GCNGC | 3 cut(s) | 12, 169, 912 |
| Sau3AI | GATC | 8 cut(s) | 85, 316, 379, 502, 645, 1039, 1081, 1215 |
| Sau96I | GGNCC | 3 cut(s) | 327, 463, 662 |
| ScaI | AGTACT | 1 cut(s) | 1273 |
| SchI | GAGTC | 6 cut(s) | 95, 119, 532, 638, 941, 1066 |
| ScrFI | CCNGG | 4 cut(s) | 118, 952, 978, 1247 |
| SduI | GDGCHC | 1 cut(s) | 187 |
| SinI | GGWCC | 3 cut(s) | 327, 463, 662 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 479, 1119 |
| SmlI | CTYRAG | 2 cut(s) | 28, 1262 |
| SmoI | CTYRAG | 2 cut(s) | 28, 1262 |
| SphI | GCATGC | 1 cut(s) | 27 |
| Sse9I | AATT | 2 cut(s) | 698, 852 |
| SsiI | CCGC | 5 cut(s) | 107, 166, 169, 456, 555 |
| SspMI | CTAG | 4 cut(s) | 63, 527, 806, 1161 |
| StyD4I | CCNGG | 4 cut(s) | 116, 950, 976, 1245 |
| TaaI | ACNGT | 7 cut(s) | 82, 470, 488, 614, 788, 923, 1276 |
| TaiI | ACGT | 7 cut(s) | 184, 401, 725, 830, 996, 1157, 1212 |
| TaqI | TCGA | 5 cut(s) | 144, 219, 378, 403, 945 |
| TaqII | GACCGA | 1 cut(s) | 638 |
| TasI | AATT | 2 cut(s) | 698, 852 |
| TatI | WGTACW | 2 cut(s) | 483, 1271 |
| TauI | GCSGC | 1 cut(s) | 171 |
| TfiI | GAWTC | 3 cut(s) | 221, 405, 1195 |
| Tru1I | TTAA | 3 cut(s) | 29, 1020, 1284 |
| Tru9I | TTAA | 3 cut(s) | 29, 1020, 1284 |
| TscAI | CASTG | 3 cut(s) | 85, 319, 1114 |
| TseFI | GTSAC | 1 cut(s) | 470 |
| TseI | GCWGC | 2 cut(s) | 11, 911 |
| Tsp45I | GTSAC | 1 cut(s) | 470 |
| TspDTI | ATGAA | 6 cut(s) | 25, 184, 272, 621, 664, 1253 |
| TspGWI | ACGGA | 3 cut(s) | 705, 727, 1188 |
| TspRI | CASTG | 3 cut(s) | 85, 319, 1114 |
| Tth111I | GACNNNGTC | 1 cut(s) | 995 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 242 |
| Vha464I | CTTAAG | 1 cut(s) | 28 |
| VneI | GTGCAC | 1 cut(s) | 183 |
| VpaK11BI | GGWCC | 3 cut(s) | 327, 463, 662 |
| VspI | ATTAAT | 1 cut(s) | 1020 |
| XapI | RAATTY | 1 cut(s) | 698 |
| XceI | RCATGY | 1 cut(s) | 27 |
| XspI | CTAG | 4 cut(s) | 63, 527, 806, 1161 |
| ZraI | GACGTC | 1 cut(s) | 994 |
| ZrmI | AGTACT | 1 cut(s) | 1273 |