Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 280 |
| AciI | CCGC | 2 cut(s) | 62, 89 |
| AclWI | GGATC | 1 cut(s) | 321 |
| AdeI | CACNNNGTG | 1 cut(s) | 189 |
| AfaI | GTAC | 2 cut(s) | 322, 328 |
| AgsI | TTSAA | 1 cut(s) | 71 |
| AjnI | CCWGG | 1 cut(s) | 294 |
| AlwI | GGATC | 1 cut(s) | 321 |
| Ama87I | CYCGRG | 1 cut(s) | 330 |
| AoxI | GGCC | 2 cut(s) | 96, 219 |
| AspLEI | GCGC | 1 cut(s) | 83 |
| AspS9I | GGNCC | 1 cut(s) | 220 |
| AsuHPI | GGTGA | 1 cut(s) | 103 |
| AvaI | CYCGRG | 1 cut(s) | 330 |
| BanI | GGYRCC | 1 cut(s) | 280 |
| BceAI | ACGGC | 2 cut(s) | 111, 397 |
| BciT130I | CCWGG | 1 cut(s) | 296 |
| BfaI | CTAG | 2 cut(s) | 8, 257 |
| Bme1390I | CCNGG | 1 cut(s) | 296 |
| BmeT110I | CYCGRG | 1 cut(s) | 330 |
| BmgT120I | GGNCC | 1 cut(s) | 220 |
| BmiI | GGNNCC | 1 cut(s) | 282 |
| BmrFI | CCNGG | 1 cut(s) | 296 |
| BmsI | GCATC | 3 cut(s) | 52, 250, 289 |
| BsaBI | GATNNNNATC | 1 cut(s) | 372 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 107, 137 |
| Bse1I | ACTGG | 1 cut(s) | 328 |
| Bse8I | GATNNNNATC | 1 cut(s) | 372 |
| BseBI | CCWGG | 1 cut(s) | 296 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseJI | GATNNNNATC | 1 cut(s) | 372 |
| BseNI | ACTGG | 1 cut(s) | 328 |
| BshFI | GGCC | 2 cut(s) | 98, 221 |
| BshNI | GGYRCC | 1 cut(s) | 280 |
| BsiHKCI | CYCGRG | 1 cut(s) | 330 |
| BslFI | GGGAC | 1 cut(s) | 334 |
| BsmFI | GGGAC | 1 cut(s) | 334 |
| BsnI | GGCC | 2 cut(s) | 98, 221 |
| BsoBI | CYCGRG | 1 cut(s) | 330 |
| Bsp143I | GATC | 1 cut(s) | 313 |
| BspACI | CCGC | 2 cut(s) | 62, 89 |
| BspANI | GGCC | 2 cut(s) | 98, 221 |
| BspLI | GGNNCC | 1 cut(s) | 282 |
| BspPI | GGATC | 1 cut(s) | 321 |
| BspT107I | GGYRCC | 1 cut(s) | 280 |
| BsrI | ACTGG | 1 cut(s) | 328 |
| BssMI | GATC | 1 cut(s) | 313 |
| Bst2UI | CCWGG | 1 cut(s) | 296 |
| BstC8I | GCNNGC | 1 cut(s) | 168 |
| BstEII | GGTNACC | 1 cut(s) | 251 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstHHI | GCGC | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 316 |
| BstMBI | GATC | 1 cut(s) | 313 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 20, 40, 95, 176 |
| BstNI | CCWGG | 1 cut(s) | 296 |
| BstPI | GGTNACC | 1 cut(s) | 251 |
| BstSCI | CCNGG | 1 cut(s) | 294 |
| BstX2I | RGATCY | 1 cut(s) | 313 |
| BstYI | RGATCY | 1 cut(s) | 313 |
| BsuRI | GGCC | 2 cut(s) | 98, 221 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| Cac8I | GCNNGC | 1 cut(s) | 168 |
| CfoI | GCGC | 1 cut(s) | 83 |
| Cfr13I | GGNCC | 1 cut(s) | 220 |
| Csp6I | GTAC | 2 cut(s) | 321, 327 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 198, 233 |
| CviAII | CATG | 2 cut(s) | 31, 176 |
| CviJI | RGCY | 5 cut(s) | 14, 51, 98, 221, 412 |
| CviKI_1 | RGCY | 5 cut(s) | 14, 51, 98, 221, 412 |
| CviQI | GTAC | 2 cut(s) | 321, 327 |
| DpnI | GATC | 1 cut(s) | 315 |
| DpnII | GATC | 1 cut(s) | 313 |
| DraIII | CACNNNGTG | 1 cut(s) | 189 |
| Eco88I | CYCGRG | 1 cut(s) | 330 |
| Eco91I | GGTNACC | 1 cut(s) | 251 |
| EcoO65I | GGTNACC | 1 cut(s) | 251 |
| EcoRII | CCWGG | 1 cut(s) | 294 |
| FaeI | CATG | 2 cut(s) | 34, 179 |
| FaqI | GGGAC | 1 cut(s) | 334 |
| FatI | CATG | 2 cut(s) | 30, 175 |
| FokI | GGATG | 1 cut(s) | 311 |
| FspBI | CTAG | 2 cut(s) | 8, 257 |
| GlaI | GCGC | 1 cut(s) | 82 |
| HaeIII | GGCC | 2 cut(s) | 98, 221 |
| HhaI | GCGC | 1 cut(s) | 83 |
| Hin1II | CATG | 2 cut(s) | 34, 179 |
| Hin6I | GCGC | 1 cut(s) | 81 |
| HinP1I | GCGC | 1 cut(s) | 81 |
| HinfI | GANTC | 2 cut(s) | 27, 368 |
| HphI | GGTGA | 1 cut(s) | 103 |
| Hpy188I | TCNGA | 1 cut(s) | 127 |
| Hpy188III | TCNNGA | 1 cut(s) | 203 |
| HpyCH4V | TGCA | 3 cut(s) | 43, 153, 302 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 20, 40, 95, 176 |
| Hsp92II | CATG | 2 cut(s) | 34, 179 |
| HspAI | GCGC | 1 cut(s) | 81 |
| Kzo9I | GATC | 1 cut(s) | 313 |
| LpnPI | CCDG | 5 cut(s) | 9, 281, 297, 308, 309 |
| LweI | GCATC | 3 cut(s) | 52, 250, 289 |
| MaeI | CTAG | 2 cut(s) | 8, 257 |
| MaeIII | GTNAC | 3 cut(s) | 91, 181, 251 |
| MalI | GATC | 1 cut(s) | 315 |
| MboI | GATC | 1 cut(s) | 313 |
| MflI | RGATCY | 1 cut(s) | 313 |
| MlyI | GAGTC | 1 cut(s) | 21 |
| MmeI | TCCRAC | 1 cut(s) | 105 |
| MnlI | CCTC | 8 cut(s) | 4, 109, 121, 139, 271, 304, 326, 364 |
| MseI | TTAA | 1 cut(s) | 430 |
| MspR9I | CCNGG | 1 cut(s) | 296 |
| MvaI | CCWGG | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 20, 40, 95, 176 |
| NdeII | GATC | 1 cut(s) | 313 |
| NlaIII | CATG | 2 cut(s) | 34, 179 |
| NlaIV | GGNNCC | 1 cut(s) | 282 |
| NmuCI | GTSAC | 2 cut(s) | 91, 181 |
| PaeR7I | CTCGAG | 1 cut(s) | 330 |
| PfeI | GAWTC | 1 cut(s) | 368 |
| PfoI | TCCNGGA | 1 cut(s) | 294 |
| PleI | GAGTC | 1 cut(s) | 21 |
| PpsI | GAGTC | 1 cut(s) | 21 |
| Psp6I | CCWGG | 1 cut(s) | 294 |
| PspEI | GGTNACC | 1 cut(s) | 251 |
| PspGI | CCWGG | 1 cut(s) | 294 |
| PspN4I | GGNNCC | 1 cut(s) | 282 |
| PspPI | GGNCC | 1 cut(s) | 220 |
| PspXI | VCTCGAGB | 1 cut(s) | 330 |
| PsuI | RGATCY | 1 cut(s) | 313 |
| RsaI | GTAC | 2 cut(s) | 322, 328 |
| RsaNI | GTAC | 2 cut(s) | 321, 327 |
| SaqAI | TTAA | 1 cut(s) | 430 |
| Sau3AI | GATC | 1 cut(s) | 313 |
| Sau96I | GGNCC | 1 cut(s) | 220 |
| SchI | GAGTC | 1 cut(s) | 21 |
| ScrFI | CCNGG | 1 cut(s) | 296 |
| SetI | ASST | 4 cut(s) | 132, 258, 286, 337 |
| SfaNI | GCATC | 3 cut(s) | 52, 250, 289 |
| Sfr274I | CTCGAG | 1 cut(s) | 330 |
| SlaI | CTCGAG | 1 cut(s) | 330 |
| SmlI | CTYRAG | 1 cut(s) | 330 |
| SmoI | CTYRAG | 1 cut(s) | 330 |
| SsiI | CCGC | 2 cut(s) | 62, 89 |
| SspI | AATATT | 1 cut(s) | 391 |
| SspMI | CTAG | 2 cut(s) | 8, 257 |
| StyD4I | CCNGG | 1 cut(s) | 294 |
| TaqI | TCGA | 1 cut(s) | 331 |
| TatI | WGTACW | 1 cut(s) | 320 |
| TfiI | GAWTC | 1 cut(s) | 368 |
| Tru1I | TTAA | 1 cut(s) | 430 |
| Tru9I | TTAA | 1 cut(s) | 430 |
| TseFI | GTSAC | 2 cut(s) | 91, 181 |
| Tsp45I | GTSAC | 2 cut(s) | 91, 181 |
| TspDTI | ATGAA | 1 cut(s) | 164 |
| XhoI | CTCGAG | 1 cut(s) | 330 |
| XspI | CTAG | 2 cut(s) | 8, 257 |