Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 162, 321 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 154, 294 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 171, 203 |
| AluBI | AGCT | 3 cut(s) | 7, 130, 171 |
| AluI | AGCT | 3 cut(s) | 7, 130, 171 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 171 |
| ApoI | RAATTY | 2 cut(s) | 162, 321 |
| AseI | ATTAAT | 1 cut(s) | 143 |
| AspLEI | GCGC | 1 cut(s) | 176 |
| BanII | GRGCYC | 1 cut(s) | 9 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BceAI | ACGGC | 1 cut(s) | 185 |
| BfaI | CTAG | 1 cut(s) | 20 |
| BisI | GCNGC | 1 cut(s) | 172 |
| BlsI | GCNGC | 1 cut(s) | 173 |
| BsaJI | CCNNGG | 2 cut(s) | 31, 201 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 154, 294 |
| BseDI | CCNNGG | 2 cut(s) | 31, 201 |
| BseGI | GGATG | 2 cut(s) | 27, 267 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 154, 294 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 154, 294 |
| BsnI | GGCC | 1 cut(s) | 200 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 16 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BssECI | CCNNGG | 2 cut(s) | 31, 201 |
| BssMI | GATC | 1 cut(s) | 16 |
| BssT1I | CCWWGG | 1 cut(s) | 31 |
| Bst4CI | ACNGT | 2 cut(s) | 236, 279 |
| BstC8I | GCNNGC | 1 cut(s) | 74 |
| BstDEI | CTNAG | 2 cut(s) | 167, 249 |
| BstDSI | CCRYGG | 1 cut(s) | 201 |
| BstF5I | GGATG | 2 cut(s) | 27, 267 |
| BstHHI | GCGC | 1 cut(s) | 176 |
| BstKTI | GATC | 1 cut(s) | 19 |
| BstMBI | GATC | 1 cut(s) | 16 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 110 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtgI | CCRYGG | 1 cut(s) | 201 |
| BtsCI | GGATG | 2 cut(s) | 27, 267 |
| BtsI | GCAGTG | 1 cut(s) | 77 |
| BtsIMutI | CAGTG | 1 cut(s) | 77 |
| Cac8I | GCNNGC | 1 cut(s) | 74 |
| CfoI | GCGC | 1 cut(s) | 176 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 3 cut(s) | 14, 56, 229 |
| CviJI | RGCY | 8 cut(s) | 7, 23, 72, 130, 158, 171, 200, 206 |
| CviKI_1 | RGCY | 8 cut(s) | 7, 23, 72, 130, 158, 171, 200, 206 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DdeI | CTNAG | 2 cut(s) | 167, 249 |
| DpnI | GATC | 1 cut(s) | 18 |
| DpnII | GATC | 1 cut(s) | 16 |
| Ecl136II | GAGCTC | 1 cut(s) | 7 |
| Eco130I | CCWWGG | 1 cut(s) | 31 |
| Eco24I | GRGCYC | 1 cut(s) | 9 |
| Eco53kI | GAGCTC | 1 cut(s) | 7 |
| EcoICRI | GAGCTC | 1 cut(s) | 7 |
| EcoRI | GAATTC | 1 cut(s) | 321 |
| EcoT14I | CCWWGG | 1 cut(s) | 31 |
| EcoT38I | GRGCYC | 1 cut(s) | 9 |
| ErhI | CCWWGG | 1 cut(s) | 31 |
| FaeI | CATG | 3 cut(s) | 17, 59, 232 |
| FaiI | YATR | 4 cut(s) | 15, 57, 225, 230 |
| FatI | CATG | 3 cut(s) | 13, 55, 228 |
| Fnu4HI | GCNGC | 1 cut(s) | 172 |
| FokI | GGATG | 2 cut(s) | 14, 254 |
| FriOI | GRGCYC | 1 cut(s) | 9 |
| Fsp4HI | GCNGC | 1 cut(s) | 172 |
| FspBI | CTAG | 1 cut(s) | 20 |
| GlaI | GCGC | 1 cut(s) | 175 |
| GluI | GCNGC | 1 cut(s) | 172 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| HhaI | GCGC | 1 cut(s) | 176 |
| Hin1II | CATG | 3 cut(s) | 17, 59, 232 |
| Hin6I | GCGC | 1 cut(s) | 174 |
| HinP1I | GCGC | 1 cut(s) | 174 |
| HinfI | GANTC | 1 cut(s) | 253 |
| HpyAV | CCTTC | 2 cut(s) | 148, 298 |
| HpyCH4III | ACNGT | 2 cut(s) | 236, 279 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 110 |
| HpyF3I | CTNAG | 2 cut(s) | 167, 249 |
| Hsp92II | CATG | 3 cut(s) | 17, 59, 232 |
| HspAI | GCGC | 1 cut(s) | 174 |
| Kzo9I | GATC | 1 cut(s) | 16 |
| LmnI | GCTCC | 2 cut(s) | 4, 12 |
| LpnPI | CCDG | 2 cut(s) | 23, 162 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MaeI | CTAG | 1 cut(s) | 20 |
| MaeIII | GTNAC | 1 cut(s) | 236 |
| MalI | GATC | 1 cut(s) | 18 |
| MboI | GATC | 1 cut(s) | 16 |
| MboII | GAAGA | 1 cut(s) | 325 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MluCI | AATT | 3 cut(s) | 140, 162, 321 |
| MlyI | GAGTC | 1 cut(s) | 247 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 228, 295 |
| MseI | TTAA | 1 cut(s) | 143 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 110 |
| NdeII | GATC | 1 cut(s) | 16 |
| NlaIII | CATG | 3 cut(s) | 17, 59, 232 |
| NmeAIII | GCCGAG | 1 cut(s) | 48 |
| PkrI | GCNGC | 1 cut(s) | 173 |
| PleI | GAGTC | 1 cut(s) | 247 |
| PpsI | GAGTC | 1 cut(s) | 247 |
| PshBI | ATTAAT | 1 cut(s) | 143 |
| Psp124BI | GAGCTC | 1 cut(s) | 9 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| SacI | GAGCTC | 1 cut(s) | 9 |
| SaqAI | TTAA | 1 cut(s) | 143 |
| SatI | GCNGC | 1 cut(s) | 172 |
| Sau3AI | GATC | 1 cut(s) | 16 |
| SchI | GAGTC | 1 cut(s) | 247 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 3 cut(s) | 9, 132, 173 |
| Sse9I | AATT | 3 cut(s) | 140, 162, 321 |
| SspMI | CTAG | 1 cut(s) | 20 |
| SstI | GAGCTC | 1 cut(s) | 9 |
| StyI | CCWWGG | 1 cut(s) | 31 |
| TaaI | ACNGT | 2 cut(s) | 236, 279 |
| TaqI | TCGA | 1 cut(s) | 134 |
| TasI | AATT | 3 cut(s) | 140, 162, 321 |
| Tru1I | TTAA | 1 cut(s) | 143 |
| Tru9I | TTAA | 1 cut(s) | 143 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TseI | GCWGC | 1 cut(s) | 171 |
| TspDTI | ATGAA | 3 cut(s) | 66, 245, 314 |
| TspGWI | ACGGA | 1 cut(s) | 137 |
| TspRI | CASTG | 1 cut(s) | 84 |
| VspI | ATTAAT | 1 cut(s) | 143 |
| XapI | RAATTY | 2 cut(s) | 162, 321 |
| XspI | CTAG | 1 cut(s) | 20 |