Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 209 |
| AciI | CCGC | 3 cut(s) | 200, 236, 353 |
| AcoI | YGGCCR | 1 cut(s) | 550 |
| AcsI | RAATTY | 3 cut(s) | 105, 137, 299 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 209 |
| AgsI | TTSAA | 3 cut(s) | 422, 455, 628 |
| AjiI | CACGTC | 1 cut(s) | 412 |
| AleI | CACNNNNGTG | 1 cut(s) | 173 |
| AoxI | GGCC | 3 cut(s) | 155, 463, 550 |
| ApeKI | GCWGC | 3 cut(s) | 187, 308, 365 |
| ApoI | RAATTY | 3 cut(s) | 105, 137, 299 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 337 |
| AspS9I | GGNCC | 2 cut(s) | 155, 463 |
| AsuHPI | GGTGA | 1 cut(s) | 451 |
| BaeGI | GKGCMC | 1 cut(s) | 492 |
| BalI | TGGCCA | 1 cut(s) | 552 |
| BbvI | GCAGC | 3 cut(s) | 199, 295, 377 |
| BccI | CCATC | 2 cut(s) | 430, 565 |
| BfaI | CTAG | 2 cut(s) | 183, 507 |
| BfmI | CTRYAG | 2 cut(s) | 309, 405 |
| BisI | GCNGC | 5 cut(s) | 188, 200, 237, 309, 366 |
| BlsI | GCNGC | 5 cut(s) | 189, 201, 238, 310, 367 |
| BmgBI | CACGTC | 1 cut(s) | 412 |
| BmgT120I | GGNCC | 2 cut(s) | 155, 463 |
| BmiI | GGNNCC | 2 cut(s) | 96, 633 |
| BmsI | GCATC | 2 cut(s) | 223, 418 |
| BsaBI | GATNNNNATC | 1 cut(s) | 672 |
| BsaJI | CCNNGG | 2 cut(s) | 158, 191 |
| BsaWI | WCCGGW | 1 cut(s) | 613 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 258, 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 209 |
| Bse3DI | GCAATG | 2 cut(s) | 75, 324 |
| Bse8I | GATNNNNATC | 1 cut(s) | 672 |
| BseDI | CCNNGG | 2 cut(s) | 158, 191 |
| BseGI | GGATG | 2 cut(s) | 250, 433 |
| BseJI | GATNNNNATC | 1 cut(s) | 672 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BseMI | GCAATG | 2 cut(s) | 75, 324 |
| BseMII | CTCAG | 1 cut(s) | 545 |
| BseRI | GAGGAG | 1 cut(s) | 279 |
| BseSI | GKGCMC | 1 cut(s) | 492 |
| BseXI | GCAGC | 3 cut(s) | 199, 295, 377 |
| BsgI | GTGCAG | 1 cut(s) | 140 |
| BshFI | GGCC | 3 cut(s) | 157, 465, 552 |
| BsiSI | CCGG | 1 cut(s) | 614 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 209 |
| BsnI | GGCC | 3 cut(s) | 157, 465, 552 |
| Bsp1286I | GDGCHC | 1 cut(s) | 492 |
| Bsp19I | CCATGG | 1 cut(s) | 191 |
| BspACI | CCGC | 3 cut(s) | 200, 236, 353 |
| BspANI | GGCC | 3 cut(s) | 157, 465, 552 |
| BspCNI | CTCAG | 1 cut(s) | 544 |
| BspLI | GGNNCC | 2 cut(s) | 96, 633 |
| BspMAI | CTGCAG | 1 cut(s) | 313 |
| BsrDI | GCAATG | 2 cut(s) | 75, 324 |
| BssECI | CCNNGG | 2 cut(s) | 158, 191 |
| BssT1I | CCWWGG | 1 cut(s) | 191 |
| Bst4CI | ACNGT | 2 cut(s) | 113, 252 |
| BstDEI | CTNAG | 1 cut(s) | 531 |
| BstDSI | CCRYGG | 1 cut(s) | 191 |
| BstEII | GGTNACC | 1 cut(s) | 439 |
| BstF5I | GGATG | 2 cut(s) | 250, 433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 127, 196, 314, 374 |
| BstPI | GGTNACC | 1 cut(s) | 439 |
| BstSFI | CTRYAG | 2 cut(s) | 309, 405 |
| BstSLI | GKGCMC | 1 cut(s) | 492 |
| BstV1I | GCAGC | 3 cut(s) | 199, 295, 377 |
| BsuRI | GGCC | 3 cut(s) | 157, 465, 552 |
| BtgI | CCRYGG | 1 cut(s) | 191 |
| BtrI | CACGTC | 1 cut(s) | 412 |
| BtsCI | GGATG | 2 cut(s) | 250, 433 |
| BtsI | GCAGTG | 1 cut(s) | 384 |
| BtsIMutI | CAGTG | 3 cut(s) | 109, 384, 539 |
| Cfr13I | GGNCC | 2 cut(s) | 155, 463 |
| CviAII | CATG | 6 cut(s) | 134, 152, 192, 240, 304, 458 |
| DdeI | CTNAG | 1 cut(s) | 531 |
| EaeI | YGGCCR | 1 cut(s) | 550 |
| EciI | GGCGGA | 1 cut(s) | 368 |
| Eco130I | CCWWGG | 1 cut(s) | 191 |
| Eco91I | GGTNACC | 1 cut(s) | 439 |
| EcoO109I | RGGNCCY | 1 cut(s) | 463 |
| EcoO65I | GGTNACC | 1 cut(s) | 439 |
| EcoRI | GAATTC | 2 cut(s) | 137, 299 |
| EcoT14I | CCWWGG | 1 cut(s) | 191 |
| ErhI | CCWWGG | 1 cut(s) | 191 |
| FaeI | CATG | 6 cut(s) | 137, 155, 195, 243, 307, 461 |
| FatI | CATG | 6 cut(s) | 133, 151, 191, 239, 303, 457 |
| Fnu4HI | GCNGC | 5 cut(s) | 188, 200, 237, 309, 366 |
| FokI | GGATG | 2 cut(s) | 257, 440 |
| Fsp4HI | GCNGC | 5 cut(s) | 188, 200, 237, 309, 366 |
| FspBI | CTAG | 2 cut(s) | 183, 507 |
| GluI | GCNGC | 5 cut(s) | 188, 200, 237, 309, 366 |
| HaeIII | GGCC | 3 cut(s) | 157, 465, 552 |
| HapII | CCGG | 1 cut(s) | 614 |
| Hin1II | CATG | 6 cut(s) | 137, 155, 195, 243, 307, 461 |
| HinfI | GANTC | 1 cut(s) | 473 |
| HpaII | CCGG | 1 cut(s) | 614 |
| HphI | GGTGA | 1 cut(s) | 451 |
| Hpy188I | TCNGA | 2 cut(s) | 103, 435 |
| Hpy99I | CGWCG | 1 cut(s) | 565 |
| HpyAV | CCTTC | 2 cut(s) | 108, 416 |
| HpyCH4III | ACNGT | 2 cut(s) | 113, 252 |
| HpyCH4IV | ACGT | 3 cut(s) | 61, 174, 411 |
| HpyCH4V | TGCA | 5 cut(s) | 68, 121, 311, 500, 537 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 127, 196, 314, 374 |
| HpyF3I | CTNAG | 1 cut(s) | 531 |
| HpySE526I | ACGT | 3 cut(s) | 61, 174, 411 |
| Hsp92II | CATG | 6 cut(s) | 137, 155, 195, 243, 307, 461 |
| LmnI | GCTCC | 1 cut(s) | 94 |
| LpnPI | CCDG | 4 cut(s) | 216, 410, 565, 627 |
| Lsp1109I | GCAGC | 3 cut(s) | 199, 295, 377 |
| LweI | GCATC | 2 cut(s) | 223, 418 |
| MaeI | CTAG | 2 cut(s) | 183, 507 |
| MaeII | ACGT | 3 cut(s) | 61, 174, 411 |
| MaeIII | GTNAC | 3 cut(s) | 178, 439, 541 |
| MboII | GAAGA | 1 cut(s) | 175 |
| MhlI | GDGCHC | 1 cut(s) | 492 |
| MlsI | TGGCCA | 1 cut(s) | 552 |
| MluCI | AATT | 6 cut(s) | 105, 137, 226, 299, 333, 660 |
| MluNI | TGGCCA | 1 cut(s) | 552 |
| MnlI | CCTC | 6 cut(s) | 153, 257, 264, 322, 454, 658 |
| Mox20I | TGGCCA | 1 cut(s) | 552 |
| MroXI | GAANNNNTTC | 1 cut(s) | 337 |
| MscI | TGGCCA | 1 cut(s) | 552 |
| MseI | TTAA | 3 cut(s) | 219, 518, 659 |
| MslI | CAYNNNNRTG | 1 cut(s) | 173 |
| Msp20I | TGGCCA | 1 cut(s) | 552 |
| MspI | CCGG | 1 cut(s) | 614 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 127, 196, 314, 374 |
| NcoI | CCATGG | 1 cut(s) | 191 |
| NlaIII | CATG | 6 cut(s) | 137, 155, 195, 243, 307, 461 |
| NlaIV | GGNNCC | 2 cut(s) | 96, 633 |
| NmeAIII | GCCGAG | 1 cut(s) | 183 |
| NmuCI | GTSAC | 2 cut(s) | 178, 439 |
| OliI | CACNNNNGTG | 1 cut(s) | 173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 337 |
| PfeI | GAWTC | 1 cut(s) | 473 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 209 |
| PkrI | GCNGC | 5 cut(s) | 189, 201, 238, 310, 367 |
| PspEI | GGTNACC | 1 cut(s) | 439 |
| PspN4I | GGNNCC | 2 cut(s) | 96, 633 |
| PspPI | GGNCC | 2 cut(s) | 155, 463 |
| PstI | CTGCAG | 1 cut(s) | 313 |
| RseI | CAYNNNNRTG | 1 cut(s) | 173 |
| SaqAI | TTAA | 3 cut(s) | 219, 518, 659 |
| SatI | GCNGC | 5 cut(s) | 188, 200, 237, 309, 366 |
| Sau96I | GGNCC | 2 cut(s) | 155, 463 |
| SduI | GDGCHC | 1 cut(s) | 492 |
| SetI | ASST | 7 cut(s) | 64, 177, 414, 543, 584, 637, 657 |
| SfaNI | GCATC | 2 cut(s) | 223, 418 |
| SfcI | CTRYAG | 2 cut(s) | 309, 405 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 173 |
| Sse9I | AATT | 6 cut(s) | 105, 137, 226, 299, 333, 660 |
| SsiI | CCGC | 3 cut(s) | 200, 236, 353 |
| SspMI | CTAG | 2 cut(s) | 183, 507 |
| StyI | CCWWGG | 1 cut(s) | 191 |
| TaaI | ACNGT | 2 cut(s) | 113, 252 |
| TaiI | ACGT | 3 cut(s) | 64, 177, 414 |
| TaqI | TCGA | 1 cut(s) | 560 |
| TasI | AATT | 6 cut(s) | 105, 137, 226, 299, 333, 660 |
| TauI | GCSGC | 2 cut(s) | 202, 239 |
| TfiI | GAWTC | 1 cut(s) | 473 |
| Tru1I | TTAA | 3 cut(s) | 219, 518, 659 |
| Tru9I | TTAA | 3 cut(s) | 219, 518, 659 |
| TscAI | CASTG | 3 cut(s) | 116, 384, 539 |
| TseFI | GTSAC | 2 cut(s) | 178, 439 |
| TseI | GCWGC | 3 cut(s) | 187, 308, 365 |
| Tsp45I | GTSAC | 2 cut(s) | 178, 439 |
| TspDTI | ATGAA | 4 cut(s) | 150, 261, 292, 465 |
| TspRI | CASTG | 3 cut(s) | 116, 384, 539 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 209 |
| XapI | RAATTY | 3 cut(s) | 105, 137, 299 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 149, 210 |
| XmnI | GAANNNNTTC | 1 cut(s) | 337 |
| XspI | CTAG | 2 cut(s) | 183, 507 |