Pentatricopeptide repeat-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 620 |
| AciI | CCGC | 3 cut(s) | 1290, 1357, 1492 |
| AclWI | GGATC | 4 cut(s) | 821, 1014, 1154, 1167 |
| AcsI | RAATTY | 3 cut(s) | 356, 1124, 1540 |
| AcuI | CTGAAG | 1 cut(s) | 1161 |
| AfaI | GTAC | 4 cut(s) | 67, 92, 857, 930 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 338 |
| AflIII | ACRYGT | 1 cut(s) | 1103 |
| AjnI | CCWGG | 4 cut(s) | 332, 765, 1155, 1308 |
| AluBI | AGCT | 8 cut(s) | 514, 1020, 1033, 1174, 1213, 1229, 1431, 1566 |
| AluI | AGCT | 8 cut(s) | 514, 1020, 1033, 1174, 1213, 1229, 1431, 1566 |
| Alw26I | GTCTC | 3 cut(s) | 823, 929, 1112 |
| AlwI | GGATC | 4 cut(s) | 821, 1014, 1154, 1167 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1523 |
| Ama87I | CYCGRG | 1 cut(s) | 187 |
| Aor13HI | TCCGGA | 1 cut(s) | 620 |
| AoxI | GGCC | 3 cut(s) | 669, 1067, 1592 |
| ApeKI | GCWGC | 3 cut(s) | 685, 1217, 1428 |
| ApoI | RAATTY | 3 cut(s) | 356, 1124, 1540 |
| AseI | ATTAAT | 1 cut(s) | 1086 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1341 |
| AspLEI | GCGC | 1 cut(s) | 942 |
| AspS9I | GGNCC | 5 cut(s) | 133, 226, 639, 1068, 1592 |
| AsuC2I | CCSGG | 1 cut(s) | 700 |
| AsuHPI | GGTGA | 2 cut(s) | 353, 857 |
| AvaI | CYCGRG | 1 cut(s) | 187 |
| AvaII | GGWCC | 3 cut(s) | 133, 226, 639 |
| AxyI | CCTNAGG | 1 cut(s) | 993 |
| BamHI | GGATCC | 1 cut(s) | 1159 |
| BbvI | GCAGC | 3 cut(s) | 672, 1229, 1440 |
| BccI | CCATC | 9 cut(s) | 123, 262, 469, 763, 803, 836, 1102, 1371, 1445 |
| BciT130I | CCWGG | 4 cut(s) | 334, 767, 1157, 1310 |
| BcnI | CCSGG | 1 cut(s) | 700 |
| BcoDI | GTCTC | 3 cut(s) | 823, 929, 1112 |
| BfaI | CTAG | 2 cut(s) | 63, 903 |
| BfmI | CTRYAG | 1 cut(s) | 1063 |
| BglII | AGATCT | 1 cut(s) | 529 |
| BisI | GCNGC | 4 cut(s) | 686, 1218, 1429, 1493 |
| BlsI | GCNGC | 4 cut(s) | 687, 1219, 1430, 1494 |
| Bme1390I | CCNGG | 5 cut(s) | 334, 700, 767, 1157, 1310 |
| Bme18I | GGWCC | 3 cut(s) | 133, 226, 639 |
| BmeT110I | CYCGRG | 1 cut(s) | 187 |
| BmgT120I | GGNCC | 5 cut(s) | 133, 226, 639, 1068, 1592 |
| BmiI | GGNNCC | 3 cut(s) | 227, 1161, 1533 |
| BmrFI | CCNGG | 5 cut(s) | 334, 700, 767, 1157, 1310 |
| BmrI | ACTGGG | 1 cut(s) | 355 |
| BmsI | GCATC | 7 cut(s) | 49, 183, 477, 553, 583, 890, 1229 |
| BmuI | ACTGGG | 1 cut(s) | 355 |
| BpmI | CTGGAG | 2 cut(s) | 1152, 1647 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1617 |
| BpuEI | CTTGAG | 2 cut(s) | 884, 1193 |
| BpuMI | CCSGG | 1 cut(s) | 700 |
| BsaBI | GATNNNNATC | 1 cut(s) | 460 |
| BsaJI | CCNNGG | 4 cut(s) | 332, 672, 1155, 1308 |
| BsaWI | WCCGGW | 1 cut(s) | 620 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 33, 1630, 1660 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 338 |
| Bse118I | RCCGGY | 1 cut(s) | 228 |
| Bse1I | ACTGG | 4 cut(s) | 350, 370, 493, 936 |
| Bse21I | CCTNAGG | 1 cut(s) | 993 |
| Bse3DI | GCAATG | 2 cut(s) | 841, 1369 |
| Bse8I | GATNNNNATC | 1 cut(s) | 460 |
| BseAI | TCCGGA | 1 cut(s) | 620 |
| BseBI | CCWGG | 4 cut(s) | 334, 767, 1157, 1310 |
| BseDI | CCNNGG | 4 cut(s) | 332, 672, 1155, 1308 |
| BseJI | GATNNNNATC | 1 cut(s) | 460 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 338 |
| BseMI | GCAATG | 2 cut(s) | 841, 1369 |
| BseMII | CTCAG | 2 cut(s) | 1007, 1581 |
| BseNI | ACTGG | 4 cut(s) | 350, 370, 493, 936 |
| BseXI | GCAGC | 3 cut(s) | 672, 1229, 1440 |
| BseYI | CCCAGC | 1 cut(s) | 1589 |
| BsgI | GTGCAG | 2 cut(s) | 711, 1447 |
| BshFI | GGCC | 3 cut(s) | 671, 1069, 1594 |
| BsiHKCI | CYCGRG | 1 cut(s) | 187 |
| BsiSI | CCGG | 3 cut(s) | 229, 621, 699 |
| BslFI | GGGAC | 2 cut(s) | 239, 481 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 338 |
| BsmAI | GTCTC | 3 cut(s) | 823, 929, 1112 |
| BsmBI | CGTCTC | 1 cut(s) | 823 |
| BsmFI | GGGAC | 2 cut(s) | 239, 481 |
| BsnI | GGCC | 3 cut(s) | 671, 1069, 1594 |
| BsoBI | CYCGRG | 1 cut(s) | 187 |
| Bsp13I | TCCGGA | 1 cut(s) | 620 |
| Bsp1407I | TGTACA | 1 cut(s) | 90 |
| Bsp143I | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| Bsp19I | CCATGG | 1 cut(s) | 672 |
| BspACI | CCGC | 3 cut(s) | 1290, 1357, 1492 |
| BspANI | GGCC | 3 cut(s) | 671, 1069, 1594 |
| BspCNI | CTCAG | 2 cut(s) | 1006, 1580 |
| BspEI | TCCGGA | 1 cut(s) | 620 |
| BspLI | GGNNCC | 3 cut(s) | 227, 1161, 1533 |
| BspPI | GGATC | 4 cut(s) | 821, 1014, 1154, 1167 |
| BspQI | GCTCTTC | 1 cut(s) | 898 |
| BsrDI | GCAATG | 2 cut(s) | 841, 1369 |
| BsrFI | RCCGGY | 1 cut(s) | 228 |
| BsrGI | TGTACA | 1 cut(s) | 90 |
| BsrI | ACTGG | 4 cut(s) | 350, 370, 493, 936 |
| BssAI | RCCGGY | 1 cut(s) | 228 |
| BssECI | CCNNGG | 4 cut(s) | 332, 672, 1155, 1308 |
| BssMI | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| BssT1I | CCWWGG | 1 cut(s) | 672 |
| Bst2UI | CCWGG | 4 cut(s) | 334, 767, 1157, 1310 |
| Bst4CI | ACNGT | 2 cut(s) | 1198, 1420 |
| Bst6I | CTCTTC | 3 cut(s) | 660, 898, 1266 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 48 |
| BstAUI | TGTACA | 1 cut(s) | 90 |
| BstC8I | GCNNGC | 3 cut(s) | 690, 1046, 1215 |
| BstDEI | CTNAG | 5 cut(s) | 161, 728, 993, 1567, 1617 |
| BstDSI | CCRYGG | 1 cut(s) | 672 |
| BstHHI | GCGC | 1 cut(s) | 942 |
| BstKTI | GATC | 6 cut(s) | 532, 763, 816, 1009, 1162, 1207 |
| BstMAI | GTCTC | 3 cut(s) | 823, 929, 1112 |
| BstMBI | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 48, 1180, 1226, 1622 |
| BstNI | CCWGG | 4 cut(s) | 334, 767, 1157, 1310 |
| BstNSI | RCATGY | 2 cut(s) | 940, 1107 |
| BstSCI | CCNGG | 5 cut(s) | 332, 698, 765, 1155, 1308 |
| BstSFI | CTRYAG | 1 cut(s) | 1063 |
| BstV1I | GCAGC | 3 cut(s) | 672, 1229, 1440 |
| BstX2I | RGATCY | 4 cut(s) | 529, 813, 1006, 1159 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 143 |
| BstYI | RGATCY | 4 cut(s) | 529, 813, 1006, 1159 |
| Bsu36I | CCTNAGG | 1 cut(s) | 993 |
| BsuRI | GGCC | 3 cut(s) | 671, 1069, 1594 |
| BtgI | CCRYGG | 1 cut(s) | 672 |
| BtgZI | GCGATG | 1 cut(s) | 625 |
| BtsIMutI | CAGTG | 2 cut(s) | 268, 1425 |
| Cac8I | GCNNGC | 3 cut(s) | 690, 1046, 1215 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1523 |
| CfoI | GCGC | 1 cut(s) | 942 |
| Cfr10I | RCCGGY | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 5 cut(s) | 133, 226, 639, 1068, 1592 |
| CseI | GACGC | 1 cut(s) | 840 |
| Csp6I | GTAC | 4 cut(s) | 66, 91, 856, 929 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 424, 459 |
| CviQI | GTAC | 4 cut(s) | 66, 91, 856, 929 |
| DdeI | CTNAG | 5 cut(s) | 161, 728, 993, 1567, 1617 |
| DpnI | GATC | 6 cut(s) | 531, 762, 815, 1008, 1161, 1206 |
| DpnII | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| Eam1104I | CTCTTC | 3 cut(s) | 660, 898, 1266 |
| EarI | CTCTTC | 3 cut(s) | 660, 898, 1266 |
| Eco130I | CCWWGG | 1 cut(s) | 672 |
| Eco47I | GGWCC | 3 cut(s) | 133, 226, 639 |
| Eco57I | CTGAAG | 1 cut(s) | 1161 |
| Eco81I | CCTNAGG | 1 cut(s) | 993 |
| Eco88I | CYCGRG | 1 cut(s) | 187 |
| EcoRII | CCWGG | 4 cut(s) | 332, 765, 1155, 1308 |
| EcoT14I | CCWWGG | 1 cut(s) | 672 |
| EcoT22I | ATGCAT | 1 cut(s) | 883 |
| ErhI | CCWWGG | 1 cut(s) | 672 |
| Esp3I | CGTCTC | 1 cut(s) | 823 |
| FaqI | GGGAC | 2 cut(s) | 239, 481 |
| Fnu4HI | GCNGC | 4 cut(s) | 686, 1218, 1429, 1493 |
| Fsp4HI | GCNGC | 4 cut(s) | 686, 1218, 1429, 1493 |
| FspBI | CTAG | 2 cut(s) | 63, 903 |
| GlaI | GCGC | 1 cut(s) | 941 |
| GluI | GCNGC | 4 cut(s) | 686, 1218, 1429, 1493 |
| GsaI | CCCAGC | 1 cut(s) | 1593 |
| GsuI | CTGGAG | 2 cut(s) | 1152, 1647 |
| HaeIII | GGCC | 3 cut(s) | 671, 1069, 1594 |
| HapII | CCGG | 3 cut(s) | 229, 621, 699 |
| HgaI | GACGC | 1 cut(s) | 840 |
| HhaI | GCGC | 1 cut(s) | 942 |
| Hin6I | GCGC | 1 cut(s) | 940 |
| HinP1I | GCGC | 1 cut(s) | 940 |
| HincII | GTYRAC | 1 cut(s) | 1282 |
| HindII | GTYRAC | 1 cut(s) | 1282 |
| HindIII | AAGCTT | 2 cut(s) | 1211, 1227 |
| HinfI | GANTC | 7 cut(s) | 32, 953, 1136, 1301, 1512, 1520, 1526 |
| HpaII | CCGG | 3 cut(s) | 229, 621, 699 |
| HphI | GGTGA | 2 cut(s) | 353, 857 |
| Hpy166II | GTNNAC | 4 cut(s) | 91, 435, 1282, 1416 |
| Hpy188I | TCNGA | 6 cut(s) | 505, 760, 916, 1141, 1204, 1525 |
| Hpy8I | GTNNAC | 4 cut(s) | 91, 435, 1282, 1416 |
| Hpy99I | CGWCG | 1 cut(s) | 456 |
| HpyAV | CCTTC | 3 cut(s) | 167, 168, 173 |
| HpyCH4III | ACNGT | 2 cut(s) | 1198, 1420 |
| HpyCH4IV | ACGT | 3 cut(s) | 451, 508, 1653 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 48, 1180, 1226, 1622 |
| HpyF3I | CTNAG | 5 cut(s) | 161, 728, 993, 1567, 1617 |
| HpySE526I | ACGT | 3 cut(s) | 451, 508, 1653 |
| HspAI | GCGC | 1 cut(s) | 940 |
| Kpn2I | TCCGGA | 1 cut(s) | 620 |
| Kzo9I | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| LguI | GCTCTTC | 1 cut(s) | 898 |
| LmnI | GCTCC | 3 cut(s) | 561, 571, 966 |
| Lsp1109I | GCAGC | 3 cut(s) | 672, 1229, 1440 |
| LweI | GCATC | 7 cut(s) | 49, 183, 477, 553, 583, 890, 1229 |
| MaeI | CTAG | 2 cut(s) | 63, 903 |
| MaeII | ACGT | 3 cut(s) | 451, 508, 1653 |
| MaeIII | GTNAC | 5 cut(s) | 341, 473, 694, 1099, 1576 |
| MalI | GATC | 6 cut(s) | 531, 762, 815, 1008, 1161, 1206 |
| MboI | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| MboII | GAAGA | 8 cut(s) | 92, 110, 570, 677, 885, 929, 1154, 1283 |
| MflI | RGATCY | 4 cut(s) | 529, 813, 1006, 1159 |
| MluCI | AATT | 9 cut(s) | 98, 315, 356, 397, 551, 706, 1083, 1124, 1540 |
| MlyI | GAGTC | 3 cut(s) | 962, 1145, 1514 |
| Mph1103I | ATGCAT | 1 cut(s) | 883 |
| MroI | TCCGGA | 1 cut(s) | 620 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1341 |
| MseI | TTAA | 3 cut(s) | 387, 549, 1086 |
| MslI | CAYNNNNRTG | 1 cut(s) | 141 |
| MspA1I | CMGCKG | 2 cut(s) | 1020, 1431 |
| MspI | CCGG | 3 cut(s) | 229, 621, 699 |
| MspR9I | CCNGG | 5 cut(s) | 334, 700, 767, 1157, 1310 |
| MvaI | CCWGG | 4 cut(s) | 334, 767, 1157, 1310 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 48, 1180, 1226, 1622 |
| NciI | CCSGG | 1 cut(s) | 700 |
| NcoI | CCATGG | 1 cut(s) | 672 |
| NdeII | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| NlaIV | GGNNCC | 3 cut(s) | 227, 1161, 1533 |
| NmuCI | GTSAC | 2 cut(s) | 341, 473 |
| NsiI | ATGCAT | 1 cut(s) | 883 |
| NspI | RCATGY | 2 cut(s) | 940, 1107 |
| PaeR7I | CTCGAG | 1 cut(s) | 187 |
| PciI | ACATGT | 1 cut(s) | 1103 |
| PciSI | GCTCTTC | 1 cut(s) | 898 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1341 |
| PfeI | GAWTC | 4 cut(s) | 32, 1301, 1512, 1526 |
| PfoI | TCCNGGA | 1 cut(s) | 765 |
| PkrI | GCNGC | 4 cut(s) | 687, 1219, 1430, 1494 |
| PleI | GAGTC | 3 cut(s) | 961, 1144, 1514 |
| PpsI | GAGTC | 3 cut(s) | 961, 1144, 1514 |
| PscI | ACATGT | 1 cut(s) | 1103 |
| PshBI | ATTAAT | 1 cut(s) | 1086 |
| Psp6I | CCWGG | 4 cut(s) | 332, 765, 1155, 1308 |
| PspFI | CCCAGC | 1 cut(s) | 1589 |
| PspGI | CCWGG | 4 cut(s) | 332, 765, 1155, 1308 |
| PspN4I | GGNNCC | 3 cut(s) | 227, 1161, 1533 |
| PspPI | GGNCC | 5 cut(s) | 133, 226, 639, 1068, 1592 |
| PspXI | VCTCGAGB | 1 cut(s) | 187 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1523 |
| PsuI | RGATCY | 4 cut(s) | 529, 813, 1006, 1159 |
| PvuII | CAGCTG | 2 cut(s) | 1020, 1431 |
| RsaI | GTAC | 4 cut(s) | 67, 92, 857, 930 |
| RsaNI | GTAC | 4 cut(s) | 66, 91, 856, 929 |
| RseI | CAYNNNNRTG | 1 cut(s) | 141 |
| SapI | GCTCTTC | 1 cut(s) | 898 |
| SaqAI | TTAA | 3 cut(s) | 387, 549, 1086 |
| SatI | GCNGC | 4 cut(s) | 686, 1218, 1429, 1493 |
| Sau3AI | GATC | 6 cut(s) | 529, 760, 813, 1006, 1159, 1204 |
| Sau96I | GGNCC | 5 cut(s) | 133, 226, 639, 1068, 1592 |
| SchI | GAGTC | 3 cut(s) | 962, 1145, 1514 |
| ScrFI | CCNGG | 5 cut(s) | 334, 700, 767, 1157, 1310 |
| SfaNI | GCATC | 7 cut(s) | 49, 183, 477, 553, 583, 890, 1229 |
| SfcI | CTRYAG | 1 cut(s) | 1063 |
| Sfr274I | CTCGAG | 1 cut(s) | 187 |
| SinI | GGWCC | 3 cut(s) | 133, 226, 639 |
| SlaI | CTCGAG | 1 cut(s) | 187 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 141 |
| SmlI | CTYRAG | 3 cut(s) | 187, 863, 1208 |
| SmoI | CTYRAG | 3 cut(s) | 187, 863, 1208 |
| Sse9I | AATT | 9 cut(s) | 98, 315, 356, 397, 551, 706, 1083, 1124, 1540 |
| SsiI | CCGC | 3 cut(s) | 1290, 1357, 1492 |
| SspMI | CTAG | 2 cut(s) | 63, 903 |
| StyD4I | CCNGG | 5 cut(s) | 332, 698, 765, 1155, 1308 |
| StyI | CCWWGG | 1 cut(s) | 672 |
| TaaI | ACNGT | 2 cut(s) | 1198, 1420 |
| TaiI | ACGT | 3 cut(s) | 454, 511, 1656 |
| TaqI | TCGA | 6 cut(s) | 188, 454, 827, 1269, 1345, 1501 |
| TasI | AATT | 9 cut(s) | 98, 315, 356, 397, 551, 706, 1083, 1124, 1540 |
| TatI | WGTACW | 3 cut(s) | 65, 90, 855 |
| TauI | GCSGC | 1 cut(s) | 1495 |
| TfiI | GAWTC | 4 cut(s) | 32, 1301, 1512, 1526 |
| Tru1I | TTAA | 3 cut(s) | 387, 549, 1086 |
| Tru9I | TTAA | 3 cut(s) | 387, 549, 1086 |
| TscAI | CASTG | 2 cut(s) | 268, 1425 |
| TseFI | GTSAC | 2 cut(s) | 341, 473 |
| TseI | GCWGC | 3 cut(s) | 685, 1217, 1428 |
| Tsp45I | GTSAC | 2 cut(s) | 341, 473 |
| TspDTI | ATGAA | 5 cut(s) | 299, 369, 624, 995, 1314 |
| TspGWI | ACGGA | 1 cut(s) | 461 |
| TspRI | CASTG | 2 cut(s) | 268, 1425 |
| VpaK11BI | GGWCC | 3 cut(s) | 133, 226, 639 |
| VspI | ATTAAT | 1 cut(s) | 1086 |
| XapI | RAATTY | 3 cut(s) | 356, 1124, 1540 |
| XbaI | TCTAGA | 1 cut(s) | 902 |
| XceI | RCATGY | 2 cut(s) | 940, 1107 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 122 |
| XhoI | CTCGAG | 1 cut(s) | 187 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1341 |
| XspI | CTAG | 2 cut(s) | 63, 903 |
| Zsp2I | ATGCAT | 1 cut(s) | 883 |