Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 525 |
| AciI | CCGC | 1 cut(s) | 104 |
| AclWI | GGATC | 1 cut(s) | 158 |
| AcsI | RAATTY | 1 cut(s) | 488 |
| AcuI | CTGAAG | 1 cut(s) | 74 |
| AfaI | GTAC | 3 cut(s) | 136, 299, 350 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 63, 256, 525 |
| AflII | CTTAAG | 1 cut(s) | 229 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 405, 437 |
| AluBI | AGCT | 7 cut(s) | 83, 128, 209, 247, 253, 440, 478 |
| AluI | AGCT | 7 cut(s) | 83, 128, 209, 247, 253, 440, 478 |
| Alw26I | GTCTC | 2 cut(s) | 117, 332 |
| AlwI | GGATC | 1 cut(s) | 158 |
| AoxI | GGCC | 1 cut(s) | 67 |
| ApeKI | GCWGC | 3 cut(s) | 101, 368, 534 |
| ApoI | RAATTY | 1 cut(s) | 488 |
| AspLEI | GCGC | 1 cut(s) | 396 |
| AspS9I | GGNCC | 1 cut(s) | 67 |
| BanII | GRGCYC | 1 cut(s) | 145 |
| BbvI | GCAGC | 3 cut(s) | 88, 355, 546 |
| BccI | CCATC | 1 cut(s) | 328 |
| BclI | TGATCA | 1 cut(s) | 39 |
| BcoDI | GTCTC | 2 cut(s) | 117, 332 |
| BfaI | CTAG | 1 cut(s) | 125 |
| BfrI | CTTAAG | 1 cut(s) | 229 |
| BisI | GCNGC | 3 cut(s) | 102, 369, 535 |
| BlsI | GCNGC | 3 cut(s) | 103, 370, 536 |
| BmcAI | AGTACT | 1 cut(s) | 299 |
| BmgT120I | GGNCC | 1 cut(s) | 67 |
| BmiI | GGNNCC | 2 cut(s) | 68, 144 |
| BmrI | ACTGGG | 1 cut(s) | 147 |
| BmsI | GCATC | 1 cut(s) | 226 |
| BmuI | ACTGGG | 1 cut(s) | 147 |
| BpmI | CTGGAG | 1 cut(s) | 233 |
| BsaJI | CCNNGG | 2 cut(s) | 70, 146 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 127, 157 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 63, 256, 525 |
| Bse1I | ACTGG | 1 cut(s) | 142 |
| Bse3DI | GCAATG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 2 cut(s) | 70, 146 |
| BseGI | GGATG | 1 cut(s) | 424 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 63, 256, 525 |
| BseMI | GCAATG | 1 cut(s) | 53 |
| BseNI | ACTGG | 1 cut(s) | 142 |
| BseXI | GCAGC | 3 cut(s) | 88, 355, 546 |
| BshFI | GGCC | 1 cut(s) | 69 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 63, 256, 525 |
| BsmAI | GTCTC | 2 cut(s) | 117, 332 |
| BsnI | GGCC | 1 cut(s) | 69 |
| Bsp1286I | GDGCHC | 1 cut(s) | 145 |
| Bsp143I | GATC | 2 cut(s) | 39, 150 |
| BspACI | CCGC | 1 cut(s) | 104 |
| BspANI | GGCC | 1 cut(s) | 69 |
| BspLI | GGNNCC | 2 cut(s) | 68, 144 |
| BspPI | GGATC | 1 cut(s) | 158 |
| BspTI | CTTAAG | 1 cut(s) | 229 |
| BsrDI | GCAATG | 1 cut(s) | 53 |
| BsrI | ACTGG | 1 cut(s) | 142 |
| BssECI | CCNNGG | 2 cut(s) | 70, 146 |
| BssMI | GATC | 2 cut(s) | 39, 150 |
| Bst4CI | ACNGT | 2 cut(s) | 165, 179 |
| Bst6I | CTCTTC | 1 cut(s) | 102 |
| BstAFI | CTTAAG | 1 cut(s) | 229 |
| BstDEI | CTNAG | 1 cut(s) | 266 |
| BstDSI | CCRYGG | 1 cut(s) | 146 |
| BstF5I | GGATG | 1 cut(s) | 424 |
| BstHHI | GCGC | 1 cut(s) | 396 |
| BstKTI | GATC | 2 cut(s) | 42, 153 |
| BstMAI | GTCTC | 2 cut(s) | 117, 332 |
| BstMBI | GATC | 2 cut(s) | 39, 150 |
| BstV1I | GCAGC | 3 cut(s) | 88, 355, 546 |
| BsuRI | GGCC | 1 cut(s) | 69 |
| BtgI | CCRYGG | 1 cut(s) | 146 |
| BtsCI | GGATG | 1 cut(s) | 424 |
| BtsIMutI | CAGTG | 1 cut(s) | 537 |
| CfoI | GCGC | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 67 |
| Csp6I | GTAC | 3 cut(s) | 135, 298, 349 |
| CviAII | CATG | 3 cut(s) | 43, 290, 463 |
| CviQI | GTAC | 3 cut(s) | 135, 298, 349 |
| DdeI | CTNAG | 1 cut(s) | 266 |
| DpnI | GATC | 2 cut(s) | 41, 152 |
| DpnII | GATC | 2 cut(s) | 39, 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 102 |
| EarI | CTCTTC | 1 cut(s) | 102 |
| Eco24I | GRGCYC | 1 cut(s) | 145 |
| Eco57I | CTGAAG | 1 cut(s) | 74 |
| EcoT38I | GRGCYC | 1 cut(s) | 145 |
| FaeI | CATG | 3 cut(s) | 46, 293, 466 |
| FaiI | YATR | 7 cut(s) | 44, 182, 189, 291, 318, 459, 464 |
| FatI | CATG | 3 cut(s) | 42, 289, 462 |
| FbaI | TGATCA | 1 cut(s) | 39 |
| Fnu4HI | GCNGC | 3 cut(s) | 102, 369, 535 |
| FokI | GGATG | 1 cut(s) | 431 |
| FriOI | GRGCYC | 1 cut(s) | 145 |
| Fsp4HI | GCNGC | 3 cut(s) | 102, 369, 535 |
| FspBI | CTAG | 1 cut(s) | 125 |
| GlaI | GCGC | 1 cut(s) | 395 |
| GluI | GCNGC | 3 cut(s) | 102, 369, 535 |
| GsuI | CTGGAG | 1 cut(s) | 233 |
| HaeIII | GGCC | 1 cut(s) | 69 |
| HhaI | GCGC | 1 cut(s) | 396 |
| Hin1II | CATG | 3 cut(s) | 46, 293, 466 |
| Hin6I | GCGC | 1 cut(s) | 394 |
| HinP1I | GCGC | 1 cut(s) | 394 |
| HinfI | GANTC | 3 cut(s) | 110, 284, 556 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 93 |
| HpyAV | CCTTC | 2 cut(s) | 33, 91 |
| HpyCH4III | ACNGT | 2 cut(s) | 165, 179 |
| HpyCH4IV | ACGT | 1 cut(s) | 550 |
| HpyCH4V | TGCA | 6 cut(s) | 46, 170, 191, 239, 371, 379 |
| HpyF3I | CTNAG | 1 cut(s) | 266 |
| HpySE526I | ACGT | 1 cut(s) | 550 |
| Hsp92II | CATG | 3 cut(s) | 46, 293, 466 |
| HspAI | GCGC | 1 cut(s) | 394 |
| Ksp22I | TGATCA | 1 cut(s) | 39 |
| Kzo9I | GATC | 2 cut(s) | 39, 150 |
| LmnI | GCTCC | 3 cut(s) | 25, 148, 252 |
| LpnPI | CCDG | 5 cut(s) | 49, 123, 263, 390, 396 |
| Lsp1109I | GCAGC | 3 cut(s) | 88, 355, 546 |
| LweI | GCATC | 1 cut(s) | 226 |
| MaeI | CTAG | 1 cut(s) | 125 |
| MaeII | ACGT | 1 cut(s) | 550 |
| MaeIII | GTNAC | 2 cut(s) | 211, 285 |
| MalI | GATC | 2 cut(s) | 41, 152 |
| MboI | GATC | 2 cut(s) | 39, 150 |
| MboII | GAAGA | 3 cut(s) | 106, 119, 343 |
| MhlI | GDGCHC | 1 cut(s) | 145 |
| MluCI | AATT | 1 cut(s) | 488 |
| MlyI | GAGTC | 2 cut(s) | 119, 293 |
| MnlI | CCTC | 4 cut(s) | 65, 253, 268, 382 |
| MseI | TTAA | 1 cut(s) | 230 |
| MspCI | CTTAAG | 1 cut(s) | 229 |
| NdeII | GATC | 2 cut(s) | 39, 150 |
| NlaIII | CATG | 3 cut(s) | 46, 293, 466 |
| NlaIV | GGNNCC | 2 cut(s) | 68, 144 |
| NmeAIII | GCCGAG | 1 cut(s) | 95 |
| NmuCI | GTSAC | 2 cut(s) | 211, 285 |
| PfeI | GAWTC | 1 cut(s) | 556 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 525 |
| PkrI | GCNGC | 3 cut(s) | 103, 370, 536 |
| PleI | GAGTC | 2 cut(s) | 118, 292 |
| PpsI | GAGTC | 2 cut(s) | 118, 292 |
| PspN4I | GGNNCC | 2 cut(s) | 68, 144 |
| PspPI | GGNCC | 1 cut(s) | 67 |
| RsaI | GTAC | 3 cut(s) | 136, 299, 350 |
| RsaNI | GTAC | 3 cut(s) | 135, 298, 349 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SatI | GCNGC | 3 cut(s) | 102, 369, 535 |
| Sau3AI | GATC | 2 cut(s) | 39, 150 |
| Sau96I | GGNCC | 1 cut(s) | 67 |
| ScaI | AGTACT | 1 cut(s) | 299 |
| SchI | GAGTC | 2 cut(s) | 119, 293 |
| SduI | GDGCHC | 1 cut(s) | 145 |
| SfaNI | GCATC | 1 cut(s) | 226 |
| SmlI | CTYRAG | 1 cut(s) | 229 |
| SmoI | CTYRAG | 1 cut(s) | 229 |
| Sse9I | AATT | 1 cut(s) | 488 |
| SsiI | CCGC | 1 cut(s) | 104 |
| SspMI | CTAG | 1 cut(s) | 125 |
| TaaI | ACNGT | 2 cut(s) | 165, 179 |
| TaiI | ACGT | 1 cut(s) | 553 |
| TaqI | TCGA | 1 cut(s) | 282 |
| TasI | AATT | 1 cut(s) | 488 |
| TatI | WGTACW | 3 cut(s) | 134, 297, 348 |
| TfiI | GAWTC | 1 cut(s) | 556 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TscAI | CASTG | 1 cut(s) | 544 |
| TseFI | GTSAC | 2 cut(s) | 211, 285 |
| TseI | GCWGC | 3 cut(s) | 101, 368, 534 |
| Tsp45I | GTSAC | 2 cut(s) | 211, 285 |
| TspDTI | ATGAA | 3 cut(s) | 306, 548, 558 |
| TspGWI | ACGGA | 1 cut(s) | 163 |
| TspRI | CASTG | 1 cut(s) | 544 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 525 |
| Vha464I | CTTAAG | 1 cut(s) | 229 |
| XapI | RAATTY | 1 cut(s) | 488 |
| XspI | CTAG | 1 cut(s) | 125 |
| ZrmI | AGTACT | 1 cut(s) | 299 |