ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 4 cut(s) | 252, 271, 277, 311 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 54 |
| AflIII | ACRYGT | 1 cut(s) | 294 |
| AgsI | TTSAA | 1 cut(s) | 95 |
| AhlI | ACTAGT | 1 cut(s) | 272 |
| Alw26I | GTCTC | 2 cut(s) | 202, 221 |
| Ama87I | CYCGRG | 1 cut(s) | 279 |
| AoxI | GGCC | 1 cut(s) | 168 |
| ApeKI | GCWGC | 1 cut(s) | 32 |
| AseI | ATTAAT | 1 cut(s) | 333 |
| AspS9I | GGNCC | 1 cut(s) | 169 |
| AvaI | CYCGRG | 1 cut(s) | 279 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BcoDI | GTCTC | 2 cut(s) | 202, 221 |
| BcuI | ACTAGT | 1 cut(s) | 272 |
| BfaI | CTAG | 2 cut(s) | 273, 363 |
| BfmI | CTRYAG | 1 cut(s) | 33 |
| BisI | GCNGC | 1 cut(s) | 33 |
| BlpI | GCTNAGC | 1 cut(s) | 354 |
| BlsI | GCNGC | 1 cut(s) | 34 |
| BmcAI | AGTACT | 1 cut(s) | 277 |
| BmeT110I | CYCGRG | 1 cut(s) | 279 |
| BmgT120I | GGNCC | 1 cut(s) | 169 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 56, 88 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 354 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 54 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 54 |
| BseMII | CTCAG | 2 cut(s) | 66, 345 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| BshFI | GGCC | 1 cut(s) | 170 |
| BsiHKCI | CYCGRG | 1 cut(s) | 279 |
| BslFI | GGGAC | 1 cut(s) | 283 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 54 |
| BsmAI | GTCTC | 2 cut(s) | 202, 221 |
| BsmFI | GGGAC | 1 cut(s) | 283 |
| BsnI | GGCC | 1 cut(s) | 170 |
| BsoBI | CYCGRG | 1 cut(s) | 279 |
| Bsp1407I | TGTACA | 1 cut(s) | 309 |
| Bsp143I | GATC | 1 cut(s) | 316 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 354 |
| BspANI | GGCC | 1 cut(s) | 170 |
| BspCNI | CTCAG | 2 cut(s) | 67, 346 |
| BspMAI | CTGCAG | 1 cut(s) | 37 |
| BsrGI | TGTACA | 1 cut(s) | 309 |
| BssMI | GATC | 1 cut(s) | 316 |
| BstAUI | TGTACA | 1 cut(s) | 309 |
| BstDEI | CTNAG | 3 cut(s) | 75, 205, 354 |
| BstKTI | GATC | 1 cut(s) | 319 |
| BstMAI | GTCTC | 2 cut(s) | 202, 221 |
| BstMBI | GATC | 1 cut(s) | 316 |
| BstNSI | RCATGY | 1 cut(s) | 298 |
| BstSFI | CTRYAG | 1 cut(s) | 33 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BsuRI | GGCC | 1 cut(s) | 170 |
| BtsI | GCAGTG | 1 cut(s) | 42 |
| BtsIMutI | CAGTG | 1 cut(s) | 42 |
| Cfr13I | GGNCC | 1 cut(s) | 169 |
| Csp6I | GTAC | 4 cut(s) | 251, 270, 276, 310 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 147, 182 |
| CviAII | CATG | 2 cut(s) | 61, 295 |
| CviJI | RGCY | 3 cut(s) | 170, 353, 358 |
| CviKI_1 | RGCY | 3 cut(s) | 170, 353, 358 |
| CviQI | GTAC | 4 cut(s) | 251, 270, 276, 310 |
| DdeI | CTNAG | 3 cut(s) | 75, 205, 354 |
| DpnI | GATC | 1 cut(s) | 318 |
| DpnII | GATC | 1 cut(s) | 316 |
| Eco32I | GATATC | 1 cut(s) | 10 |
| Eco88I | CYCGRG | 1 cut(s) | 279 |
| EcoRV | GATATC | 1 cut(s) | 10 |
| FaeI | CATG | 2 cut(s) | 64, 298 |
| FaiI | YATR | 7 cut(s) | 62, 89, 109, 174, 258, 296, 327 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 237, 269 |
| FaqI | GGGAC | 1 cut(s) | 283 |
| FatI | CATG | 2 cut(s) | 60, 294 |
| Fnu4HI | GCNGC | 1 cut(s) | 33 |
| Fsp4HI | GCNGC | 1 cut(s) | 33 |
| FspBI | CTAG | 2 cut(s) | 273, 363 |
| GluI | GCNGC | 1 cut(s) | 33 |
| HaeIII | GGCC | 1 cut(s) | 170 |
| Hin1II | CATG | 2 cut(s) | 64, 298 |
| HincII | GTYRAC | 1 cut(s) | 292 |
| HindII | GTYRAC | 1 cut(s) | 292 |
| HinfI | GANTC | 2 cut(s) | 229, 263 |
| HpaI | GTTAAC | 1 cut(s) | 292 |
| Hpy166II | GTNNAC | 1 cut(s) | 292 |
| Hpy188I | TCNGA | 1 cut(s) | 76 |
| Hpy8I | GTNNAC | 1 cut(s) | 292 |
| HpyCH4V | TGCA | 2 cut(s) | 35, 102 |
| HpyF3I | CTNAG | 3 cut(s) | 75, 205, 354 |
| Hsp92II | CATG | 2 cut(s) | 64, 298 |
| KspAI | GTTAAC | 1 cut(s) | 292 |
| Kzo9I | GATC | 1 cut(s) | 316 |
| LmnI | GCTCC | 1 cut(s) | 57 |
| LpnPI | CCDG | 1 cut(s) | 246 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| MaeI | CTAG | 2 cut(s) | 273, 363 |
| MalI | GATC | 1 cut(s) | 318 |
| MboI | GATC | 1 cut(s) | 316 |
| MboII | GAAGA | 1 cut(s) | 107 |
| MluCI | AATT | 1 cut(s) | 160 |
| MlyI | GAGTC | 1 cut(s) | 223 |
| MnlI | CCTC | 7 cut(s) | 58, 70, 253, 275, 313, 343, 369 |
| MseI | TTAA | 4 cut(s) | 113, 291, 333, 367 |
| NdeII | GATC | 1 cut(s) | 316 |
| NlaIII | CATG | 2 cut(s) | 64, 298 |
| NspI | RCATGY | 1 cut(s) | 298 |
| PaeR7I | CTCGAG | 1 cut(s) | 279 |
| PciI | ACATGT | 1 cut(s) | 294 |
| PfeI | GAWTC | 1 cut(s) | 263 |
| PkrI | GCNGC | 1 cut(s) | 34 |
| PleI | GAGTC | 1 cut(s) | 223 |
| PpsI | GAGTC | 1 cut(s) | 223 |
| PscI | ACATGT | 1 cut(s) | 294 |
| PshBI | ATTAAT | 1 cut(s) | 333 |
| PspPI | GGNCC | 1 cut(s) | 169 |
| PspXI | VCTCGAGB | 1 cut(s) | 279 |
| PstI | CTGCAG | 1 cut(s) | 37 |
| RsaI | GTAC | 4 cut(s) | 252, 271, 277, 311 |
| RsaNI | GTAC | 4 cut(s) | 251, 270, 276, 310 |
| SaqAI | TTAA | 4 cut(s) | 113, 291, 333, 367 |
| SatI | GCNGC | 1 cut(s) | 33 |
| Sau3AI | GATC | 1 cut(s) | 316 |
| Sau96I | GGNCC | 1 cut(s) | 169 |
| ScaI | AGTACT | 1 cut(s) | 277 |
| SchI | GAGTC | 1 cut(s) | 223 |
| SetI | ASST | 3 cut(s) | 81, 145, 286 |
| SfcI | CTRYAG | 1 cut(s) | 33 |
| Sfr274I | CTCGAG | 1 cut(s) | 279 |
| SlaI | CTCGAG | 1 cut(s) | 279 |
| SmlI | CTYRAG | 1 cut(s) | 279 |
| SmoI | CTYRAG | 1 cut(s) | 279 |
| SpeI | ACTAGT | 1 cut(s) | 272 |
| Sse9I | AATT | 1 cut(s) | 160 |
| SspMI | CTAG | 2 cut(s) | 273, 363 |
| TaqI | TCGA | 1 cut(s) | 280 |
| TasI | AATT | 1 cut(s) | 160 |
| TatI | WGTACW | 4 cut(s) | 250, 269, 275, 309 |
| TfiI | GAWTC | 1 cut(s) | 263 |
| Tru1I | TTAA | 4 cut(s) | 113, 291, 333, 367 |
| Tru9I | TTAA | 4 cut(s) | 113, 291, 333, 367 |
| TscAI | CASTG | 1 cut(s) | 42 |
| TseI | GCWGC | 1 cut(s) | 32 |
| TspRI | CASTG | 1 cut(s) | 42 |
| VspI | ATTAAT | 1 cut(s) | 333 |
| XceI | RCATGY | 1 cut(s) | 298 |
| XhoI | CTCGAG | 1 cut(s) | 279 |
| XspI | CTAG | 2 cut(s) | 273, 363 |
| ZrmI | AGTACT | 1 cut(s) | 277 |