Ribonuclease H protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 412 |
| AccIII | TCCGGA | 1 cut(s) | 319 |
| AclWI | GGATC | 1 cut(s) | 305 |
| AcsI | RAATTY | 1 cut(s) | 396 |
| AfaI | GTAC | 1 cut(s) | 430 |
| AgsI | TTSAA | 2 cut(s) | 74, 104 |
| AjnI | CCWGG | 1 cut(s) | 277 |
| Alw26I | GTCTC | 1 cut(s) | 224 |
| AlwI | GGATC | 1 cut(s) | 305 |
| Aor13HI | TCCGGA | 1 cut(s) | 319 |
| AoxI | GGCC | 1 cut(s) | 339 |
| ApoI | RAATTY | 1 cut(s) | 396 |
| BccI | CCATC | 1 cut(s) | 248 |
| BciT130I | CCWGG | 1 cut(s) | 279 |
| BciVI | GTATCC | 2 cut(s) | 258, 316 |
| BclI | TGATCA | 1 cut(s) | 24 |
| BcoDI | GTCTC | 1 cut(s) | 224 |
| BfaI | CTAG | 2 cut(s) | 245, 294 |
| BfuAI | ACCTGC | 1 cut(s) | 412 |
| BfuI | GTATCC | 2 cut(s) | 258, 316 |
| Bme1390I | CCNGG | 1 cut(s) | 279 |
| BmrFI | CCNGG | 1 cut(s) | 279 |
| BpuEI | CTTGAG | 2 cut(s) | 24, 66 |
| BsaWI | WCCGGW | 1 cut(s) | 319 |
| Bse118I | RCCGGY | 1 cut(s) | 431 |
| Bse1I | ACTGG | 1 cut(s) | 164 |
| BseAI | TCCGGA | 1 cut(s) | 319 |
| BseBI | CCWGG | 1 cut(s) | 279 |
| BseGI | GGATG | 2 cut(s) | 240, 274 |
| BseNI | ACTGG | 1 cut(s) | 164 |
| BseRI | GAGGAG | 1 cut(s) | 388 |
| BsgI | GTGCAG | 1 cut(s) | 27 |
| BshFI | GGCC | 1 cut(s) | 341 |
| BsiSI | CCGG | 2 cut(s) | 320, 432 |
| BsmAI | GTCTC | 1 cut(s) | 224 |
| BsnI | GGCC | 1 cut(s) | 341 |
| Bsp13I | TCCGGA | 1 cut(s) | 319 |
| Bsp143I | GATC | 4 cut(s) | 24, 97, 297, 438 |
| BspANI | GGCC | 1 cut(s) | 341 |
| BspEI | TCCGGA | 1 cut(s) | 319 |
| BspMI | ACCTGC | 1 cut(s) | 412 |
| BspPI | GGATC | 1 cut(s) | 305 |
| BsrFI | RCCGGY | 1 cut(s) | 431 |
| BsrI | ACTGG | 1 cut(s) | 164 |
| BssAI | RCCGGY | 1 cut(s) | 431 |
| BssMI | GATC | 4 cut(s) | 24, 97, 297, 438 |
| Bst2UI | CCWGG | 1 cut(s) | 279 |
| Bst6I | CTCTTC | 2 cut(s) | 158, 189 |
| BstF5I | GGATG | 2 cut(s) | 240, 274 |
| BstKTI | GATC | 4 cut(s) | 27, 100, 300, 441 |
| BstMAI | GTCTC | 1 cut(s) | 224 |
| BstMBI | GATC | 4 cut(s) | 24, 97, 297, 438 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 245, 254 |
| BstNI | CCWGG | 1 cut(s) | 279 |
| BstSCI | CCNGG | 1 cut(s) | 277 |
| BstX2I | RGATCY | 1 cut(s) | 297 |
| BstYI | RGATCY | 1 cut(s) | 297 |
| BsuI | GTATCC | 2 cut(s) | 258, 316 |
| BsuRI | GGCC | 1 cut(s) | 341 |
| BtgZI | GCGATG | 1 cut(s) | 74 |
| BtsCI | GGATG | 2 cut(s) | 240, 274 |
| BtsI | GCAGTG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 2 cut(s) | 116, 157 |
| BveI | ACCTGC | 1 cut(s) | 412 |
| Cfr10I | RCCGGY | 1 cut(s) | 431 |
| CseI | GACGC | 1 cut(s) | 55 |
| Csp6I | GTAC | 1 cut(s) | 429 |
| CviAII | CATG | 1 cut(s) | 258 |
| CviJI | RGCY | 2 cut(s) | 38, 341 |
| CviKI_1 | RGCY | 2 cut(s) | 38, 341 |
| CviQI | GTAC | 1 cut(s) | 429 |
| DpnI | GATC | 4 cut(s) | 26, 99, 299, 440 |
| DpnII | GATC | 4 cut(s) | 24, 97, 297, 438 |
| Eam1104I | CTCTTC | 2 cut(s) | 158, 189 |
| EarI | CTCTTC | 2 cut(s) | 158, 189 |
| Eco147I | AGGCCT | 1 cut(s) | 341 |
| EcoRII | CCWGG | 1 cut(s) | 277 |
| FaeI | CATG | 1 cut(s) | 261 |
| FaiI | YATR | 5 cut(s) | 18, 57, 93, 259, 351 |
| FatI | CATG | 1 cut(s) | 257 |
| FbaI | TGATCA | 1 cut(s) | 24 |
| FokI | GGATG | 2 cut(s) | 227, 261 |
| FspBI | CTAG | 2 cut(s) | 245, 294 |
| HaeIII | GGCC | 1 cut(s) | 341 |
| HapII | CCGG | 2 cut(s) | 320, 432 |
| HgaI | GACGC | 1 cut(s) | 55 |
| Hin1II | CATG | 1 cut(s) | 261 |
| HinfI | GANTC | 1 cut(s) | 271 |
| HpaII | CCGG | 2 cut(s) | 320, 432 |
| Hpy188I | TCNGA | 1 cut(s) | 457 |
| Hpy188III | TCNNGA | 3 cut(s) | 101, 320, 483 |
| HpyCH4V | TGCA | 1 cut(s) | 8 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 245, 254 |
| Hsp92II | CATG | 1 cut(s) | 261 |
| Kpn2I | TCCGGA | 1 cut(s) | 319 |
| Ksp22I | TGATCA | 1 cut(s) | 24 |
| Kzo9I | GATC | 4 cut(s) | 24, 97, 297, 438 |
| LmnI | GCTCC | 1 cut(s) | 375 |
| LpnPI | CCDG | 8 cut(s) | 13, 145, 200, 264, 291, 333, 407, 445 |
| MaeI | CTAG | 2 cut(s) | 245, 294 |
| MaeIII | GTNAC | 2 cut(s) | 45, 182 |
| MalI | GATC | 4 cut(s) | 26, 99, 299, 440 |
| MboI | GATC | 4 cut(s) | 24, 97, 297, 438 |
| MboII | GAAGA | 2 cut(s) | 175, 206 |
| MflI | RGATCY | 1 cut(s) | 297 |
| MluCI | AATT | 6 cut(s) | 52, 226, 232, 396, 409, 460 |
| MmeI | TCCRAC | 1 cut(s) | 149 |
| MnlI | CCTC | 5 cut(s) | 190, 255, 331, 364, 366 |
| MroI | TCCGGA | 1 cut(s) | 319 |
| MseI | TTAA | 2 cut(s) | 231, 402 |
| MspI | CCGG | 2 cut(s) | 320, 432 |
| MspR9I | CCNGG | 1 cut(s) | 279 |
| MvaI | CCWGG | 1 cut(s) | 279 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 245, 254 |
| NdeII | GATC | 4 cut(s) | 24, 97, 297, 438 |
| NlaIII | CATG | 1 cut(s) | 261 |
| PceI | AGGCCT | 1 cut(s) | 341 |
| PfeI | GAWTC | 1 cut(s) | 271 |
| Psp6I | CCWGG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 277 |
| PsuI | RGATCY | 1 cut(s) | 297 |
| RsaI | GTAC | 1 cut(s) | 430 |
| RsaNI | GTAC | 1 cut(s) | 429 |
| SaqAI | TTAA | 2 cut(s) | 231, 402 |
| Sau3AI | GATC | 4 cut(s) | 24, 97, 297, 438 |
| ScrFI | CCNGG | 1 cut(s) | 279 |
| SetI | ASST | 7 cut(s) | 52, 122, 189, 211, 349, 426, 481 |
| SmlI | CTYRAG | 2 cut(s) | 39, 81 |
| SmoI | CTYRAG | 2 cut(s) | 39, 81 |
| Sse9I | AATT | 6 cut(s) | 52, 226, 232, 396, 409, 460 |
| SseBI | AGGCCT | 1 cut(s) | 341 |
| SspMI | CTAG | 2 cut(s) | 245, 294 |
| StuI | AGGCCT | 1 cut(s) | 341 |
| StyD4I | CCNGG | 1 cut(s) | 277 |
| TasI | AATT | 6 cut(s) | 52, 226, 232, 396, 409, 460 |
| TfiI | GAWTC | 1 cut(s) | 271 |
| Tru1I | TTAA | 2 cut(s) | 231, 402 |
| Tru9I | TTAA | 2 cut(s) | 231, 402 |
| TscAI | CASTG | 2 cut(s) | 116, 164 |
| TspRI | CASTG | 2 cut(s) | 116, 164 |
| XapI | RAATTY | 1 cut(s) | 396 |
| XspI | CTAG | 2 cut(s) | 245, 294 |