Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 215 |
| AcvI | CACGTG | 2 cut(s) | 48, 170 |
| AfaI | GTAC | 2 cut(s) | 243, 259 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 40, 170, 215 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AjnI | CCWGG | 1 cut(s) | 90 |
| AluBI | AGCT | 1 cut(s) | 160 |
| AluI | AGCT | 1 cut(s) | 160 |
| ApeKI | GCWGC | 2 cut(s) | 68, 269 |
| AseI | ATTAAT | 1 cut(s) | 186 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 99 |
| AsuII | TTCGAA | 1 cut(s) | 83 |
| BaeGI | GKGCMC | 1 cut(s) | 47 |
| BbrPI | CACGTG | 2 cut(s) | 48, 170 |
| BbvI | GCAGC | 2 cut(s) | 80, 281 |
| BccI | CCATC | 3 cut(s) | 188, 215, 268 |
| BciT130I | CCWGG | 1 cut(s) | 92 |
| BfaI | CTAG | 1 cut(s) | 63 |
| BisI | GCNGC | 2 cut(s) | 69, 270 |
| BlsI | GCNGC | 2 cut(s) | 70, 271 |
| Bme1390I | CCNGG | 1 cut(s) | 92 |
| BmrFI | CCNGG | 1 cut(s) | 92 |
| Bpu14I | TTCGAA | 1 cut(s) | 83 |
| BsaAI | YACGTR | 3 cut(s) | 48, 170, 245 |
| BsaJI | CCNNGG | 1 cut(s) | 137 |
| BsaWI | WCCGGW | 1 cut(s) | 115 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 40, 170, 215 |
| BseBI | CCWGG | 1 cut(s) | 92 |
| BseDI | CCNNGG | 1 cut(s) | 137 |
| BseGI | GGATG | 3 cut(s) | 112, 199, 226 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 40, 170, 215 |
| BseMII | CTCAG | 1 cut(s) | 9 |
| BseSI | GKGCMC | 1 cut(s) | 47 |
| BseXI | GCAGC | 2 cut(s) | 80, 281 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| BsiSI | CCGG | 1 cut(s) | 116 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 40, 170, 215 |
| Bsp119I | TTCGAA | 1 cut(s) | 83 |
| Bsp1286I | GDGCHC | 1 cut(s) | 47 |
| BspCNI | CTCAG | 1 cut(s) | 10 |
| BspT104I | TTCGAA | 1 cut(s) | 83 |
| BssECI | CCNNGG | 1 cut(s) | 137 |
| BssT1I | CCWWGG | 1 cut(s) | 137 |
| Bst2UI | CCWGG | 1 cut(s) | 92 |
| Bst4CI | ACNGT | 1 cut(s) | 75 |
| BstBAI | YACGTR | 3 cut(s) | 48, 170, 245 |
| BstBI | TTCGAA | 1 cut(s) | 83 |
| BstDEI | CTNAG | 1 cut(s) | 18 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 38 |
| BstF5I | GGATG | 3 cut(s) | 112, 199, 226 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 65, 77, 275 |
| BstNI | CCWGG | 1 cut(s) | 92 |
| BstSCI | CCNGG | 1 cut(s) | 90 |
| BstSLI | GKGCMC | 1 cut(s) | 47 |
| BstV1I | GCAGC | 2 cut(s) | 80, 281 |
| BtgZI | GCGATG | 1 cut(s) | 287 |
| BtsCI | GGATG | 3 cut(s) | 112, 199, 226 |
| BtsIMutI | CAGTG | 1 cut(s) | 80 |
| Csp6I | GTAC | 2 cut(s) | 242, 258 |
| CviAII | CATG | 2 cut(s) | 293, 313 |
| CviJI | RGCY | 6 cut(s) | 80, 124, 160, 174, 278, 326 |
| CviKI_1 | RGCY | 6 cut(s) | 80, 124, 160, 174, 278, 326 |
| CviQI | GTAC | 2 cut(s) | 242, 258 |
| DdeI | CTNAG | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 137 |
| Eco72I | CACGTG | 2 cut(s) | 48, 170 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 38 |
| EcoRII | CCWGG | 1 cut(s) | 90 |
| EcoT14I | CCWWGG | 1 cut(s) | 137 |
| ErhI | CCWWGG | 1 cut(s) | 137 |
| FaeI | CATG | 2 cut(s) | 296, 316 |
| FaiI | YATR | 6 cut(s) | 11, 13, 105, 264, 294, 314 |
| FatI | CATG | 2 cut(s) | 292, 312 |
| FauNDI | CATATG | 1 cut(s) | 11 |
| Fnu4HI | GCNGC | 2 cut(s) | 69, 270 |
| FokI | GGATG | 3 cut(s) | 99, 206, 233 |
| Fsp4HI | GCNGC | 2 cut(s) | 69, 270 |
| FspBI | CTAG | 1 cut(s) | 63 |
| GluI | GCNGC | 2 cut(s) | 69, 270 |
| HapII | CCGG | 1 cut(s) | 116 |
| Hin1II | CATG | 2 cut(s) | 296, 316 |
| HpaII | CCGG | 1 cut(s) | 116 |
| Hpy188I | TCNGA | 1 cut(s) | 180 |
| HpyAV | CCTTC | 1 cut(s) | 34 |
| HpyCH4III | ACNGT | 1 cut(s) | 75 |
| HpyCH4IV | ACGT | 3 cut(s) | 47, 169, 244 |
| HpyCH4V | TGCA | 2 cut(s) | 68, 269 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 65, 77, 275 |
| HpyF3I | CTNAG | 1 cut(s) | 18 |
| HpySE526I | ACGT | 3 cut(s) | 47, 169, 244 |
| Hsp92II | CATG | 2 cut(s) | 296, 316 |
| LmnI | GCTCC | 1 cut(s) | 157 |
| LpnPI | CCDG | 4 cut(s) | 77, 104, 129, 222 |
| Lsp1109I | GCAGC | 2 cut(s) | 80, 281 |
| MaeI | CTAG | 1 cut(s) | 63 |
| MaeII | ACGT | 3 cut(s) | 47, 169, 244 |
| MaeIII | GTNAC | 1 cut(s) | 200 |
| MboII | GAAGA | 1 cut(s) | 107 |
| MhlI | GDGCHC | 1 cut(s) | 47 |
| MluCI | AATT | 1 cut(s) | 183 |
| MnlI | CCTC | 3 cut(s) | 15, 300, 316 |
| MroXI | GAANNNNTTC | 1 cut(s) | 99 |
| MseI | TTAA | 1 cut(s) | 186 |
| MspI | CCGG | 1 cut(s) | 116 |
| MspR9I | CCNGG | 1 cut(s) | 92 |
| MvaI | CCWGG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 65, 77, 275 |
| NdeI | CATATG | 1 cut(s) | 11 |
| NlaIII | CATG | 2 cut(s) | 296, 316 |
| NspV | TTCGAA | 1 cut(s) | 83 |
| PdmI | GAANNNNTTC | 1 cut(s) | 99 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 215 |
| PfoI | TCCNGGA | 1 cut(s) | 90 |
| PkrI | GCNGC | 2 cut(s) | 70, 271 |
| PmaCI | CACGTG | 2 cut(s) | 48, 170 |
| PmlI | CACGTG | 2 cut(s) | 48, 170 |
| Ppu21I | YACGTR | 3 cut(s) | 48, 170, 245 |
| PshBI | ATTAAT | 1 cut(s) | 186 |
| Psp6I | CCWGG | 1 cut(s) | 90 |
| PspCI | CACGTG | 2 cut(s) | 48, 170 |
| PspGI | CCWGG | 1 cut(s) | 90 |
| RsaI | GTAC | 2 cut(s) | 243, 259 |
| RsaNI | GTAC | 2 cut(s) | 242, 258 |
| SaqAI | TTAA | 1 cut(s) | 186 |
| SatI | GCNGC | 2 cut(s) | 69, 270 |
| ScrFI | CCNGG | 1 cut(s) | 92 |
| SduI | GDGCHC | 1 cut(s) | 47 |
| SetI | ASST | 4 cut(s) | 50, 162, 172, 247 |
| SfuI | TTCGAA | 1 cut(s) | 83 |
| Sse9I | AATT | 1 cut(s) | 183 |
| SspMI | CTAG | 1 cut(s) | 63 |
| StyD4I | CCNGG | 1 cut(s) | 90 |
| StyI | CCWWGG | 1 cut(s) | 137 |
| TaaI | ACNGT | 1 cut(s) | 75 |
| TaiI | ACGT | 3 cut(s) | 50, 172, 247 |
| TaqI | TCGA | 1 cut(s) | 83 |
| TasI | AATT | 1 cut(s) | 183 |
| Tru1I | TTAA | 1 cut(s) | 186 |
| Tru9I | TTAA | 1 cut(s) | 186 |
| TscAI | CASTG | 1 cut(s) | 80 |
| TseI | GCWGC | 2 cut(s) | 68, 269 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspRI | CASTG | 1 cut(s) | 80 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 215 |
| VspI | ATTAAT | 1 cut(s) | 186 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 38 |
| XmnI | GAANNNNTTC | 1 cut(s) | 99 |
| XspI | CTAG | 1 cut(s) | 63 |