ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Kunitz_legume | PF00197 | 26 - 198 | 8.7e-49 | Trypsin and protease inhibitor |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 477 |
| AccI | GTMKAC | 1 cut(s) | 114 |
| AciI | CCGC | 2 cut(s) | 132, 150 |
| AclWI | GGATC | 1 cut(s) | 294 |
| AcoI | YGGCCR | 1 cut(s) | 151 |
| AcuI | CTGAAG | 1 cut(s) | 507 |
| AfeI | AGCGCT | 1 cut(s) | 70 |
| AgsI | TTSAA | 2 cut(s) | 104, 430 |
| Alw21I | GWGCWC | 1 cut(s) | 81 |
| Alw26I | GTCTC | 3 cut(s) | 257, 344, 356 |
| AlwI | GGATC | 1 cut(s) | 294 |
| Aor51HI | AGCGCT | 1 cut(s) | 70 |
| AoxI | GGCC | 3 cut(s) | 151, 217, 558 |
| AspLEI | GCGC | 2 cut(s) | 71, 247 |
| AspS9I | GGNCC | 1 cut(s) | 218 |
| AsuC2I | CCSGG | 1 cut(s) | 233 |
| AsuHPI | GGTGA | 5 cut(s) | 130, 247, 272, 359, 376 |
| AsuII | TTCGAA | 1 cut(s) | 471 |
| AxyI | CCTNAGG | 2 cut(s) | 88, 214 |
| BaeGI | GKGCMC | 2 cut(s) | 482, 497 |
| BanI | GGYRCC | 1 cut(s) | 477 |
| Bbv12I | GWGCWC | 1 cut(s) | 81 |
| BccI | CCATC | 3 cut(s) | 143, 449, 560 |
| BceAI | ACGGC | 3 cut(s) | 138, 163, 393 |
| BclI | TGATCA | 1 cut(s) | 165 |
| BcnI | CCSGG | 1 cut(s) | 233 |
| BcoDI | GTCTC | 3 cut(s) | 257, 344, 356 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfoI | RGCGCY | 1 cut(s) | 72 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 225 |
| BglII | AGATCT | 1 cut(s) | 448 |
| BisI | GCNGC | 1 cut(s) | 151 |
| BlsI | GCNGC | 1 cut(s) | 152 |
| Bme1390I | CCNGG | 1 cut(s) | 233 |
| BmgT120I | GGNCC | 1 cut(s) | 218 |
| BmiI | GGNNCC | 2 cut(s) | 220, 479 |
| BmrFI | CCNGG | 1 cut(s) | 233 |
| BmsI | GCATC | 1 cut(s) | 317 |
| BoxI | GACNNNNGTC | 1 cut(s) | 183 |
| Bpu14I | TTCGAA | 1 cut(s) | 471 |
| BpuMI | CCSGG | 1 cut(s) | 233 |
| BsaI | GGTCTC | 1 cut(s) | 356 |
| BsaJI | CCNNGG | 2 cut(s) | 222, 561 |
| BsaWI | WCCGGW | 4 cut(s) | 73, 107, 386, 416 |
| Bse21I | CCTNAGG | 2 cut(s) | 88, 214 |
| BseDI | CCNNGG | 2 cut(s) | 222, 561 |
| BseGI | GGATG | 2 cut(s) | 308, 571 |
| BseMII | CTCAG | 5 cut(s) | 102, 228, 351, 368, 531 |
| BseSI | GKGCMC | 2 cut(s) | 482, 497 |
| BseX3I | CGGCCG | 1 cut(s) | 151 |
| Bsh1285I | CGRYCG | 1 cut(s) | 154 |
| BshFI | GGCC | 3 cut(s) | 153, 219, 560 |
| BshNI | GGYRCC | 1 cut(s) | 477 |
| BsiEI | CGRYCG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 81 |
| BsiSI | CCGG | 5 cut(s) | 74, 108, 233, 387, 417 |
| BsmAI | GTCTC | 3 cut(s) | 257, 344, 356 |
| BsmBI | CGTCTC | 1 cut(s) | 257 |
| BsnI | GGCC | 3 cut(s) | 153, 219, 560 |
| Bso31I | GGTCTC | 1 cut(s) | 356 |
| Bsp119I | TTCGAA | 1 cut(s) | 471 |
| Bsp1286I | GDGCHC | 3 cut(s) | 81, 482, 497 |
| Bsp143I | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| BspACI | CCGC | 2 cut(s) | 132, 150 |
| BspANI | GGCC | 3 cut(s) | 153, 219, 560 |
| BspCNI | CTCAG | 5 cut(s) | 101, 227, 352, 367, 530 |
| BspLI | GGNNCC | 2 cut(s) | 220, 479 |
| BspPI | GGATC | 1 cut(s) | 294 |
| BspQI | GCTCTTC | 1 cut(s) | 105 |
| BspT104I | TTCGAA | 1 cut(s) | 471 |
| BspT107I | GGYRCC | 1 cut(s) | 477 |
| BspTNI | GGTCTC | 1 cut(s) | 356 |
| BssECI | CCNNGG | 2 cut(s) | 222, 561 |
| BssMI | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| BssT1I | CCWWGG | 2 cut(s) | 222, 561 |
| Bst4CI | ACNGT | 2 cut(s) | 55, 268 |
| Bst6I | CTCTTC | 1 cut(s) | 105 |
| BstBI | TTCGAA | 1 cut(s) | 471 |
| BstC8I | GCNNGC | 1 cut(s) | 96 |
| BstDEI | CTNAG | 5 cut(s) | 88, 214, 354, 360, 517 |
| BstEII | GGTNACC | 1 cut(s) | 235 |
| BstF5I | GGATG | 2 cut(s) | 308, 571 |
| BstH2I | RGCGCY | 1 cut(s) | 72 |
| BstHHI | GCGC | 2 cut(s) | 71, 247 |
| BstKTI | GATC | 5 cut(s) | 21, 168, 289, 297, 451 |
| BstMAI | GTCTC | 3 cut(s) | 257, 344, 356 |
| BstMBI | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| BstMCI | CGRYCG | 1 cut(s) | 154 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 56, 225, 251 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 183 |
| BstPI | GGTNACC | 1 cut(s) | 235 |
| BstSCI | CCNGG | 1 cut(s) | 231 |
| BstSLI | GKGCMC | 2 cut(s) | 482, 497 |
| BstX2I | RGATCY | 1 cut(s) | 448 |
| BstYI | RGATCY | 1 cut(s) | 448 |
| BstZI | CGGCCG | 1 cut(s) | 151 |
| Bsu36I | CCTNAGG | 2 cut(s) | 88, 214 |
| BsuRI | GGCC | 3 cut(s) | 153, 219, 560 |
| BtsCI | GGATG | 2 cut(s) | 308, 571 |
| Cac8I | GCNNGC | 1 cut(s) | 96 |
| CfoI | GCGC | 2 cut(s) | 71, 247 |
| Cfr13I | GGNCC | 1 cut(s) | 218 |
| CviAII | CATG | 3 cut(s) | 10, 46, 336 |
| CviJI | RGCY | 9 cut(s) | 34, 59, 98, 153, 219, 228, 408, 560, 599 |
| CviKI_1 | RGCY | 9 cut(s) | 34, 59, 98, 153, 219, 228, 408, 560, 599 |
| DdeI | CTNAG | 5 cut(s) | 88, 214, 354, 360, 517 |
| DpnI | GATC | 5 cut(s) | 20, 167, 288, 296, 450 |
| DpnII | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| EaeI | YGGCCR | 1 cut(s) | 151 |
| EagI | CGGCCG | 1 cut(s) | 151 |
| Eam1104I | CTCTTC | 1 cut(s) | 105 |
| EarI | CTCTTC | 1 cut(s) | 105 |
| EclXI | CGGCCG | 1 cut(s) | 151 |
| Eco130I | CCWWGG | 2 cut(s) | 222, 561 |
| Eco31I | GGTCTC | 1 cut(s) | 356 |
| Eco47III | AGCGCT | 1 cut(s) | 70 |
| Eco52I | CGGCCG | 1 cut(s) | 151 |
| Eco57I | CTGAAG | 1 cut(s) | 507 |
| Eco81I | CCTNAGG | 2 cut(s) | 88, 214 |
| Eco91I | GGTNACC | 1 cut(s) | 235 |
| EcoO109I | RGGNCCY | 1 cut(s) | 218 |
| EcoO65I | GGTNACC | 1 cut(s) | 235 |
| EcoT14I | CCWWGG | 2 cut(s) | 222, 561 |
| ErhI | CCWWGG | 2 cut(s) | 222, 561 |
| Esp3I | CGTCTC | 1 cut(s) | 257 |
| FaeI | CATG | 3 cut(s) | 13, 49, 339 |
| FaiI | YATR | 6 cut(s) | 11, 29, 31, 47, 195, 337 |
| FatI | CATG | 3 cut(s) | 9, 45, 335 |
| FauI | CCCGC | 1 cut(s) | 139 |
| FauNDI | CATATG | 1 cut(s) | 29 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| FblI | GTMKAC | 1 cut(s) | 114 |
| Fnu4HI | GCNGC | 1 cut(s) | 151 |
| FokI | GGATG | 2 cut(s) | 295, 578 |
| Fsp4HI | GCNGC | 1 cut(s) | 151 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GlaI | GCGC | 2 cut(s) | 70, 246 |
| GluI | GCNGC | 1 cut(s) | 151 |
| HaeII | RGCGCY | 1 cut(s) | 72 |
| HaeIII | GGCC | 3 cut(s) | 153, 219, 560 |
| HapII | CCGG | 5 cut(s) | 74, 108, 233, 387, 417 |
| HhaI | GCGC | 2 cut(s) | 71, 247 |
| Hin1II | CATG | 3 cut(s) | 13, 49, 339 |
| Hin6I | GCGC | 2 cut(s) | 69, 245 |
| HinP1I | GCGC | 2 cut(s) | 69, 245 |
| HinfI | GANTC | 2 cut(s) | 179, 352 |
| HpaII | CCGG | 5 cut(s) | 74, 108, 233, 387, 417 |
| HphI | GGTGA | 5 cut(s) | 130, 247, 272, 359, 376 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 4 cut(s) | 23, 291, 361, 520 |
| Hpy188III | TCNNGA | 3 cut(s) | 203, 430, 452 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| HpyAV | CCTTC | 1 cut(s) | 334 |
| HpyCH4III | ACNGT | 2 cut(s) | 55, 268 |
| HpyCH4V | TGCA | 3 cut(s) | 308, 325, 335 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 56, 225, 251 |
| HpyF3I | CTNAG | 5 cut(s) | 88, 214, 354, 360, 517 |
| Hsp92II | CATG | 3 cut(s) | 13, 49, 339 |
| HspAI | GCGC | 2 cut(s) | 69, 245 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| LguI | GCTCTTC | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 76 |
| LweI | GCATC | 1 cut(s) | 317 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MaeIII | GTNAC | 2 cut(s) | 235, 382 |
| MalI | GATC | 5 cut(s) | 20, 167, 288, 296, 450 |
| MboI | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| MboII | GAAGA | 2 cut(s) | 92, 304 |
| MflI | RGATCY | 1 cut(s) | 448 |
| MhlI | GDGCHC | 3 cut(s) | 81, 482, 497 |
| MluCI | AATT | 2 cut(s) | 390, 466 |
| MlyI | GAGTC | 2 cut(s) | 173, 346 |
| MnlI | CCTC | 5 cut(s) | 97, 223, 250, 543, 588 |
| MseI | TTAA | 2 cut(s) | 435, 601 |
| MspI | CCGG | 5 cut(s) | 74, 108, 233, 387, 417 |
| MspR9I | CCNGG | 1 cut(s) | 233 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 56, 225, 251 |
| NciI | CCSGG | 1 cut(s) | 233 |
| NdeI | CATATG | 1 cut(s) | 29 |
| NdeII | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| NlaIII | CATG | 3 cut(s) | 13, 49, 339 |
| NlaIV | GGNNCC | 2 cut(s) | 220, 479 |
| NmuCI | GTSAC | 2 cut(s) | 235, 382 |
| NspV | TTCGAA | 1 cut(s) | 471 |
| PciSI | GCTCTTC | 1 cut(s) | 105 |
| PflFI | GACNNNGTC | 1 cut(s) | 355 |
| PkrI | GCNGC | 1 cut(s) | 152 |
| PleI | GAGTC | 2 cut(s) | 173, 346 |
| PpsI | GAGTC | 2 cut(s) | 173, 346 |
| PshAI | GACNNNNGTC | 1 cut(s) | 183 |
| PspEI | GGTNACC | 1 cut(s) | 235 |
| PspN4I | GGNNCC | 2 cut(s) | 220, 479 |
| PspPI | GGNCC | 1 cut(s) | 218 |
| PsuI | RGATCY | 1 cut(s) | 448 |
| PsyI | GACNNNGTC | 1 cut(s) | 355 |
| SapI | GCTCTTC | 1 cut(s) | 105 |
| SaqAI | TTAA | 2 cut(s) | 435, 601 |
| SatI | GCNGC | 1 cut(s) | 151 |
| Sau3AI | GATC | 5 cut(s) | 18, 165, 286, 294, 448 |
| Sau96I | GGNCC | 1 cut(s) | 218 |
| SchI | GAGTC | 2 cut(s) | 173, 346 |
| ScrFI | CCNGG | 1 cut(s) | 233 |
| SduI | GDGCHC | 3 cut(s) | 81, 482, 497 |
| SetI | ASST | 5 cut(s) | 89, 215, 242, 345, 554 |
| SfaNI | GCATC | 1 cut(s) | 317 |
| SfuI | TTCGAA | 1 cut(s) | 471 |
| Sse9I | AATT | 2 cut(s) | 390, 466 |
| SsiI | CCGC | 2 cut(s) | 132, 150 |
| SspMI | CTAG | 1 cut(s) | 35 |
| StyD4I | CCNGG | 1 cut(s) | 231 |
| StyI | CCWWGG | 2 cut(s) | 222, 561 |
| TaaI | ACNGT | 2 cut(s) | 55, 268 |
| TaqI | TCGA | 3 cut(s) | 81, 329, 471 |
| TasI | AATT | 2 cut(s) | 390, 466 |
| TauI | GCSGC | 1 cut(s) | 153 |
| Tru1I | TTAA | 2 cut(s) | 435, 601 |
| Tru9I | TTAA | 2 cut(s) | 435, 601 |
| TseFI | GTSAC | 2 cut(s) | 235, 382 |
| Tsp45I | GTSAC | 2 cut(s) | 235, 382 |
| TspDTI | ATGAA | 3 cut(s) | 26, 411, 499 |
| Tth111I | GACNNNGTC | 1 cut(s) | 355 |
| XmiI | GTMKAC | 1 cut(s) | 114 |
| XspI | CTAG | 1 cut(s) | 35 |