Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 303 |
| AfaI | GTAC | 1 cut(s) | 322 |
| AjnI | CCWGG | 1 cut(s) | 102 |
| AluBI | AGCT | 3 cut(s) | 224, 242, 293 |
| AluI | AGCT | 3 cut(s) | 224, 242, 293 |
| ApeKI | GCWGC | 3 cut(s) | 23, 221, 242 |
| AspS9I | GGNCC | 1 cut(s) | 100 |
| AsuHPI | GGTGA | 1 cut(s) | 46 |
| AvaII | GGWCC | 1 cut(s) | 100 |
| BbsI | GAAGAC | 2 cut(s) | 145, 162 |
| BbvI | GCAGC | 3 cut(s) | 35, 229, 233 |
| BciT130I | CCWGG | 1 cut(s) | 104 |
| BfaI | CTAG | 1 cut(s) | 328 |
| BfmI | CTRYAG | 1 cut(s) | 28 |
| BisI | GCNGC | 3 cut(s) | 24, 222, 243 |
| BlsI | GCNGC | 3 cut(s) | 25, 223, 244 |
| Bme1390I | CCNGG | 1 cut(s) | 104 |
| Bme18I | GGWCC | 1 cut(s) | 100 |
| BmgT120I | GGNCC | 1 cut(s) | 100 |
| BmiI | GGNNCC | 2 cut(s) | 101, 280 |
| BmrFI | CCNGG | 1 cut(s) | 104 |
| BmsI | GCATC | 1 cut(s) | 199 |
| BpiI | GAAGAC | 2 cut(s) | 145, 162 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 110, 142 |
| BpuEI | CTTGAG | 1 cut(s) | 297 |
| Bse1I | ACTGG | 1 cut(s) | 147 |
| BseBI | CCWGG | 1 cut(s) | 104 |
| BseNI | ACTGG | 1 cut(s) | 147 |
| BseRI | GAGGAG | 1 cut(s) | 56 |
| BseXI | GCAGC | 3 cut(s) | 35, 229, 233 |
| BseYI | CCCAGC | 1 cut(s) | 289 |
| BspLI | GGNNCC | 2 cut(s) | 101, 280 |
| BspMAI | CTGCAG | 1 cut(s) | 32 |
| BsrI | ACTGG | 1 cut(s) | 147 |
| Bst2UI | CCWGG | 1 cut(s) | 104 |
| Bst4CI | ACNGT | 2 cut(s) | 80, 88 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 242 |
| BstC8I | GCNNGC | 1 cut(s) | 28 |
| BstDEI | CTNAG | 1 cut(s) | 232 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| BstNI | CCWGG | 1 cut(s) | 104 |
| BstSCI | CCNGG | 1 cut(s) | 102 |
| BstSFI | CTRYAG | 1 cut(s) | 28 |
| BstV1I | GCAGC | 3 cut(s) | 35, 229, 233 |
| BstV2I | GAAGAC | 2 cut(s) | 145, 162 |
| BtsI | GCAGTG | 1 cut(s) | 21 |
| BtsIMutI | CAGTG | 1 cut(s) | 21 |
| Cac8I | GCNNGC | 1 cut(s) | 28 |
| Cfr13I | GGNCC | 1 cut(s) | 100 |
| Csp6I | GTAC | 1 cut(s) | 321 |
| CviJI | RGCY | 4 cut(s) | 26, 224, 242, 293 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 224, 242, 293 |
| CviQI | GTAC | 1 cut(s) | 321 |
| DdeI | CTNAG | 1 cut(s) | 232 |
| Eco47I | GGWCC | 1 cut(s) | 100 |
| EcoRII | CCWGG | 1 cut(s) | 102 |
| FaiI | YATR | 3 cut(s) | 198, 228, 267 |
| Fnu4HI | GCNGC | 3 cut(s) | 24, 222, 243 |
| Fsp4HI | GCNGC | 3 cut(s) | 24, 222, 243 |
| FspBI | CTAG | 1 cut(s) | 328 |
| GluI | GCNGC | 3 cut(s) | 24, 222, 243 |
| GsaI | CCCAGC | 1 cut(s) | 293 |
| HinfI | GANTC | 1 cut(s) | 71 |
| HphI | GGTGA | 1 cut(s) | 46 |
| Hpy166II | GTNNAC | 1 cut(s) | 321 |
| Hpy188I | TCNGA | 3 cut(s) | 76, 130, 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 321 |
| HpyAV | CCTTC | 2 cut(s) | 189, 269 |
| HpyCH4III | ACNGT | 2 cut(s) | 80, 88 |
| HpyCH4IV | ACGT | 1 cut(s) | 303 |
| HpyCH4V | TGCA | 1 cut(s) | 30 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| HpyF3I | CTNAG | 1 cut(s) | 232 |
| HpySE526I | ACGT | 1 cut(s) | 303 |
| LpnPI | CCDG | 5 cut(s) | 40, 89, 116, 128, 303 |
| Lsp1109I | GCAGC | 3 cut(s) | 35, 229, 233 |
| LweI | GCATC | 1 cut(s) | 199 |
| MaeI | CTAG | 1 cut(s) | 328 |
| MaeII | ACGT | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MboII | GAAGA | 4 cut(s) | 119, 150, 162, 174 |
| MluCI | AATT | 1 cut(s) | 131 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MmeI | TCCRAC | 1 cut(s) | 54 |
| MnlI | CCTC | 4 cut(s) | 12, 34, 112, 142 |
| MspR9I | CCNGG | 1 cut(s) | 104 |
| MvaI | CCWGG | 1 cut(s) | 104 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 20, 218, 242 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 280 |
| PfoI | TCCNGGA | 1 cut(s) | 102 |
| PkrI | GCNGC | 3 cut(s) | 25, 223, 244 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| Psp1406I | AACGTT | 1 cut(s) | 303 |
| Psp6I | CCWGG | 1 cut(s) | 102 |
| PspFI | CCCAGC | 1 cut(s) | 289 |
| PspGI | CCWGG | 1 cut(s) | 102 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 280 |
| PspPI | GGNCC | 1 cut(s) | 100 |
| PstI | CTGCAG | 1 cut(s) | 32 |
| RsaI | GTAC | 1 cut(s) | 322 |
| RsaNI | GTAC | 1 cut(s) | 321 |
| SatI | GCNGC | 3 cut(s) | 24, 222, 243 |
| Sau96I | GGNCC | 1 cut(s) | 100 |
| SchI | GAGTC | 1 cut(s) | 80 |
| ScrFI | CCNGG | 1 cut(s) | 104 |
| SetI | ASST | 6 cut(s) | 161, 226, 244, 280, 295, 306 |
| SfaNI | GCATC | 1 cut(s) | 199 |
| SfcI | CTRYAG | 1 cut(s) | 28 |
| SgeI | CNNG | 8 cut(s) | 39, 107, 115, 116, 139, 155, 302, 326 |
| SinI | GGWCC | 1 cut(s) | 100 |
| SmlI | CTYRAG | 1 cut(s) | 312 |
| SmoI | CTYRAG | 1 cut(s) | 312 |
| Sse9I | AATT | 1 cut(s) | 131 |
| SspMI | CTAG | 1 cut(s) | 328 |
| StyD4I | CCNGG | 1 cut(s) | 102 |
| TaaI | ACNGT | 2 cut(s) | 80, 88 |
| TaiI | ACGT | 1 cut(s) | 306 |
| TasI | AATT | 1 cut(s) | 131 |
| TatI | WGTACW | 1 cut(s) | 320 |
| TscAI | CASTG | 1 cut(s) | 21 |
| TseI | GCWGC | 3 cut(s) | 23, 221, 242 |
| TspDTI | ATGAA | 2 cut(s) | 126, 251 |
| TspRI | CASTG | 1 cut(s) | 21 |
| VpaK11BI | GGWCC | 1 cut(s) | 100 |
| XspI | CTAG | 1 cut(s) | 328 |