zinc-binding in reverse transcriptase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Cation_ATPase_N | PF00690 | 94 - 163 | 5.2e-13 | Cation transporter/ATPase, N-terminus |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 36 |
| AclI | AACGTT | 1 cut(s) | 390 |
| AclWI | GGATC | 2 cut(s) | 20, 191 |
| AcsI | RAATTY | 1 cut(s) | 333 |
| AfaI | GTAC | 1 cut(s) | 587 |
| AfeI | AGCGCT | 1 cut(s) | 483 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 36 |
| AgsI | TTSAA | 1 cut(s) | 445 |
| AluBI | AGCT | 2 cut(s) | 233, 271 |
| AluI | AGCT | 2 cut(s) | 233, 271 |
| AlwI | GGATC | 2 cut(s) | 20, 191 |
| Aor51HI | AGCGCT | 1 cut(s) | 483 |
| ApeKI | GCWGC | 2 cut(s) | 271, 479 |
| ApoI | RAATTY | 1 cut(s) | 333 |
| AspLEI | GCGC | 1 cut(s) | 484 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| BbvCI | CCTCAGC | 1 cut(s) | 351 |
| BbvI | GCAGC | 2 cut(s) | 258, 491 |
| BccI | CCATC | 2 cut(s) | 92, 530 |
| BfaI | CTAG | 3 cut(s) | 96, 206, 339 |
| BfoI | RGCGCY | 1 cut(s) | 485 |
| BisI | GCNGC | 2 cut(s) | 272, 480 |
| BlsI | GCNGC | 2 cut(s) | 273, 481 |
| BmiI | GGNNCC | 1 cut(s) | 385 |
| BmsI | GCATC | 2 cut(s) | 310, 337 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 90, 122 |
| Bpu10I | CCTNAGC | 1 cut(s) | 351 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 36 |
| BseMII | CTCAG | 1 cut(s) | 342 |
| BseRI | GAGGAG | 2 cut(s) | 299, 300 |
| BseXI | GCAGC | 2 cut(s) | 258, 491 |
| BseYI | CCCAGC | 1 cut(s) | 29 |
| BsgI | GTGCAG | 1 cut(s) | 498 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 36 |
| Bsp143I | GATC | 2 cut(s) | 25, 196 |
| BspCNI | CTCAG | 1 cut(s) | 343 |
| BspLI | GGNNCC | 1 cut(s) | 385 |
| BspPI | GGATC | 2 cut(s) | 20, 191 |
| BssMI | GATC | 2 cut(s) | 25, 196 |
| BstC8I | GCNNGC | 1 cut(s) | 20 |
| BstDEI | CTNAG | 1 cut(s) | 351 |
| BstH2I | RGCGCY | 1 cut(s) | 485 |
| BstHHI | GCGC | 1 cut(s) | 484 |
| BstKTI | GATC | 2 cut(s) | 28, 199 |
| BstMBI | GATC | 2 cut(s) | 25, 196 |
| BstNSI | RCATGY | 1 cut(s) | 22 |
| BstV1I | GCAGC | 2 cut(s) | 258, 491 |
| BstX2I | RGATCY | 1 cut(s) | 196 |
| BstYI | RGATCY | 1 cut(s) | 196 |
| BtsI | GCAGTG | 2 cut(s) | 183, 330 |
| BtsIMutI | CAGTG | 2 cut(s) | 183, 330 |
| Cac8I | GCNNGC | 1 cut(s) | 20 |
| CfoI | GCGC | 1 cut(s) | 484 |
| Csp6I | GTAC | 1 cut(s) | 586 |
| CviAII | CATG | 3 cut(s) | 19, 23, 512 |
| CviJI | RGCY | 6 cut(s) | 40, 101, 233, 271, 440, 474 |
| CviKI_1 | RGCY | 6 cut(s) | 40, 101, 233, 271, 440, 474 |
| CviQI | GTAC | 1 cut(s) | 586 |
| DdeI | CTNAG | 1 cut(s) | 351 |
| DpnI | GATC | 2 cut(s) | 27, 198 |
| DpnII | GATC | 2 cut(s) | 25, 196 |
| Eco47III | AGCGCT | 1 cut(s) | 483 |
| EcoRI | GAATTC | 1 cut(s) | 333 |
| EcoT22I | ATGCAT | 1 cut(s) | 24 |
| FaeI | CATG | 3 cut(s) | 22, 26, 515 |
| FaiI | YATR | 8 cut(s) | 20, 24, 503, 513, 571, 573, 590, 592 |
| FatI | CATG | 3 cut(s) | 18, 22, 511 |
| Fnu4HI | GCNGC | 2 cut(s) | 272, 480 |
| Fsp4HI | GCNGC | 2 cut(s) | 272, 480 |
| FspBI | CTAG | 3 cut(s) | 96, 206, 339 |
| GlaI | GCGC | 1 cut(s) | 483 |
| GluI | GCNGC | 2 cut(s) | 272, 480 |
| GsaI | CCCAGC | 1 cut(s) | 33 |
| HaeII | RGCGCY | 1 cut(s) | 485 |
| HhaI | GCGC | 1 cut(s) | 484 |
| Hin1II | CATG | 3 cut(s) | 22, 26, 515 |
| Hin6I | GCGC | 1 cut(s) | 482 |
| HinP1I | GCGC | 1 cut(s) | 482 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HinfI | GANTC | 3 cut(s) | 8, 369, 516 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 1 cut(s) | 223 |
| Hpy188I | TCNGA | 5 cut(s) | 7, 13, 196, 319, 521 |
| Hpy188III | TCNNGA | 1 cut(s) | 96 |
| Hpy8I | GTNNAC | 1 cut(s) | 223 |
| HpyAV | CCTTC | 3 cut(s) | 112, 132, 451 |
| HpyCH4IV | ACGT | 1 cut(s) | 390 |
| HpyCH4V | TGCA | 4 cut(s) | 22, 274, 323, 479 |
| HpyF3I | CTNAG | 1 cut(s) | 351 |
| HpySE526I | ACGT | 1 cut(s) | 390 |
| Hsp92II | CATG | 3 cut(s) | 22, 26, 515 |
| HspAI | GCGC | 1 cut(s) | 482 |
| Kzo9I | GATC | 2 cut(s) | 25, 196 |
| LmnI | GCTCC | 1 cut(s) | 543 |
| LpnPI | CCDG | 5 cut(s) | 43, 144, 167, 186, 281 |
| Lsp1109I | GCAGC | 2 cut(s) | 258, 491 |
| LweI | GCATC | 2 cut(s) | 310, 337 |
| MaeI | CTAG | 3 cut(s) | 96, 206, 339 |
| MaeII | ACGT | 1 cut(s) | 390 |
| MalI | GATC | 2 cut(s) | 27, 198 |
| MboI | GATC | 2 cut(s) | 25, 196 |
| MboII | GAAGA | 2 cut(s) | 262, 558 |
| MflI | RGATCY | 1 cut(s) | 196 |
| MluCI | AATT | 3 cut(s) | 190, 333, 456 |
| MmeI | TCCRAC | 4 cut(s) | 411, 414, 509, 544 |
| MnlI | CCTC | 6 cut(s) | 116, 278, 286, 320, 346, 544 |
| Mph1103I | ATGCAT | 1 cut(s) | 24 |
| MseI | TTAA | 2 cut(s) | 116, 578 |
| MslI | CAYNNNNRTG | 1 cut(s) | 551 |
| MspA1I | CMGCKG | 1 cut(s) | 271 |
| NdeII | GATC | 2 cut(s) | 25, 196 |
| NlaIII | CATG | 3 cut(s) | 22, 26, 515 |
| NlaIV | GGNNCC | 1 cut(s) | 385 |
| NsiI | ATGCAT | 1 cut(s) | 24 |
| NspI | RCATGY | 1 cut(s) | 22 |
| PaeI | GCATGC | 1 cut(s) | 22 |
| PfeI | GAWTC | 3 cut(s) | 8, 369, 516 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 36 |
| PkrI | GCNGC | 2 cut(s) | 273, 481 |
| Psp1406I | AACGTT | 1 cut(s) | 390 |
| PspFI | CCCAGC | 1 cut(s) | 29 |
| PspN4I | GGNNCC | 1 cut(s) | 385 |
| PsuI | RGATCY | 1 cut(s) | 196 |
| PvuII | CAGCTG | 1 cut(s) | 271 |
| RsaI | GTAC | 1 cut(s) | 587 |
| RsaNI | GTAC | 1 cut(s) | 586 |
| RseI | CAYNNNNRTG | 1 cut(s) | 551 |
| SaqAI | TTAA | 2 cut(s) | 116, 578 |
| SatI | GCNGC | 2 cut(s) | 272, 480 |
| Sau3AI | GATC | 2 cut(s) | 25, 196 |
| SetI | ASST | 9 cut(s) | 124, 207, 235, 273, 393, 419, 453, 529, 555 |
| SfaNI | GCATC | 2 cut(s) | 310, 337 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 551 |
| SphI | GCATGC | 1 cut(s) | 22 |
| Sse9I | AATT | 3 cut(s) | 190, 333, 456 |
| SspMI | CTAG | 3 cut(s) | 96, 206, 339 |
| TaiI | ACGT | 1 cut(s) | 393 |
| TasI | AATT | 3 cut(s) | 190, 333, 456 |
| TatI | WGTACW | 1 cut(s) | 585 |
| TfiI | GAWTC | 3 cut(s) | 8, 369, 516 |
| Tru1I | TTAA | 2 cut(s) | 116, 578 |
| Tru9I | TTAA | 2 cut(s) | 116, 578 |
| TscAI | CASTG | 2 cut(s) | 190, 330 |
| TseI | GCWGC | 2 cut(s) | 271, 479 |
| TspDTI | ATGAA | 1 cut(s) | 558 |
| TspRI | CASTG | 2 cut(s) | 190, 330 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 36 |
| XapI | RAATTY | 1 cut(s) | 333 |
| XbaI | TCTAGA | 1 cut(s) | 95 |
| XceI | RCATGY | 1 cut(s) | 22 |
| XspI | CTAG | 3 cut(s) | 96, 206, 339 |
| Zsp2I | ATGCAT | 1 cut(s) | 24 |