ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 195 |
| AccB1I | GGYRCC | 1 cut(s) | 439 |
| AclWI | GGATC | 2 cut(s) | 246, 294 |
| AcsI | RAATTY | 2 cut(s) | 45, 256 |
| AgsI | TTSAA | 2 cut(s) | 106, 255 |
| AluBI | AGCT | 2 cut(s) | 474, 500 |
| AluI | AGCT | 2 cut(s) | 474, 500 |
| AlwI | GGATC | 2 cut(s) | 246, 294 |
| Ama87I | CYCGRG | 1 cut(s) | 211 |
| AoxI | GGCC | 1 cut(s) | 198 |
| ApeKI | GCWGC | 1 cut(s) | 278 |
| ApoI | RAATTY | 2 cut(s) | 45, 256 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| AsuC2I | CCSGG | 2 cut(s) | 212, 213 |
| AvaI | CYCGRG | 1 cut(s) | 211 |
| BanI | GGYRCC | 1 cut(s) | 439 |
| BbvI | GCAGC | 1 cut(s) | 265 |
| BccI | CCATC | 2 cut(s) | 293, 317 |
| BcnI | CCSGG | 2 cut(s) | 212, 213 |
| BfaI | CTAG | 1 cut(s) | 282 |
| BfmI | CTRYAG | 1 cut(s) | 339 |
| BisI | GCNGC | 1 cut(s) | 279 |
| BlsI | GCNGC | 1 cut(s) | 280 |
| Bme1390I | CCNGG | 2 cut(s) | 212, 213 |
| BmeT110I | CYCGRG | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BmiI | GGNNCC | 1 cut(s) | 441 |
| BmrFI | CCNGG | 2 cut(s) | 212, 213 |
| BmsI | GCATC | 1 cut(s) | 254 |
| BpuMI | CCSGG | 2 cut(s) | 212, 213 |
| BsaJI | CCNNGG | 1 cut(s) | 211 |
| BseDI | CCNNGG | 1 cut(s) | 211 |
| BseGI | GGATG | 2 cut(s) | 70, 328 |
| BseMII | CTCAG | 3 cut(s) | 108, 284, 480 |
| BseXI | GCAGC | 1 cut(s) | 265 |
| BshFI | GGCC | 1 cut(s) | 200 |
| BshNI | GGYRCC | 1 cut(s) | 439 |
| BsiHKCI | CYCGRG | 1 cut(s) | 211 |
| BsiSI | CCGG | 1 cut(s) | 212 |
| BsmI | GAATGC | 1 cut(s) | 235 |
| BsnI | GGCC | 1 cut(s) | 200 |
| BsoBI | CYCGRG | 1 cut(s) | 211 |
| Bsp143I | GATC | 3 cut(s) | 34, 238, 286 |
| BspANI | GGCC | 1 cut(s) | 200 |
| BspCNI | CTCAG | 3 cut(s) | 109, 285, 481 |
| BspLI | GGNNCC | 1 cut(s) | 441 |
| BspPI | GGATC | 2 cut(s) | 246, 294 |
| BspT107I | GGYRCC | 1 cut(s) | 439 |
| BssECI | CCNNGG | 1 cut(s) | 211 |
| BssMI | GATC | 3 cut(s) | 34, 238, 286 |
| Bst6I | CTCTTC | 1 cut(s) | 453 |
| BstDEI | CTNAG | 3 cut(s) | 117, 293, 489 |
| BstF5I | GGATG | 2 cut(s) | 70, 328 |
| BstKTI | GATC | 3 cut(s) | 37, 241, 289 |
| BstMBI | GATC | 3 cut(s) | 34, 238, 286 |
| BstSCI | CCNGG | 2 cut(s) | 210, 211 |
| BstSFI | CTRYAG | 1 cut(s) | 339 |
| BstV1I | GCAGC | 1 cut(s) | 265 |
| BstX2I | RGATCY | 1 cut(s) | 286 |
| BstYI | RGATCY | 1 cut(s) | 286 |
| BsuRI | GGCC | 1 cut(s) | 200 |
| BtsCI | GGATG | 2 cut(s) | 70, 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 486 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| Cfr9I | CCCGGG | 1 cut(s) | 211 |
| CviAII | CATG | 6 cut(s) | 77, 133, 150, 242, 354, 407 |
| CviJI | RGCY | 4 cut(s) | 200, 219, 474, 500 |
| CviKI_1 | RGCY | 4 cut(s) | 200, 219, 474, 500 |
| DdeI | CTNAG | 3 cut(s) | 117, 293, 489 |
| DpnI | GATC | 3 cut(s) | 36, 240, 288 |
| DpnII | GATC | 3 cut(s) | 34, 238, 286 |
| Eam1104I | CTCTTC | 1 cut(s) | 453 |
| EarI | CTCTTC | 1 cut(s) | 453 |
| Eco88I | CYCGRG | 1 cut(s) | 211 |
| EcoT22I | ATGCAT | 1 cut(s) | 247 |
| FaeI | CATG | 6 cut(s) | 80, 136, 153, 245, 357, 410 |
| FatI | CATG | 6 cut(s) | 76, 132, 149, 241, 353, 406 |
| Fnu4HI | GCNGC | 1 cut(s) | 279 |
| FokI | GGATG | 2 cut(s) | 77, 335 |
| Fsp4HI | GCNGC | 1 cut(s) | 279 |
| FspBI | CTAG | 1 cut(s) | 282 |
| GluI | GCNGC | 1 cut(s) | 279 |
| HaeIII | GGCC | 1 cut(s) | 200 |
| HapII | CCGG | 1 cut(s) | 212 |
| Hin1II | CATG | 6 cut(s) | 80, 136, 153, 245, 357, 410 |
| HinfI | GANTC | 2 cut(s) | 350, 358 |
| HpaII | CCGG | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 8 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 1 cut(s) | 170 |
| Hpy8I | GTNNAC | 1 cut(s) | 8 |
| HpyAV | CCTTC | 3 cut(s) | 261, 372, 457 |
| HpyCH4IV | ACGT | 1 cut(s) | 10 |
| HpyCH4V | TGCA | 6 cut(s) | 80, 185, 233, 245, 385, 469 |
| HpyF3I | CTNAG | 3 cut(s) | 117, 293, 489 |
| HpySE526I | ACGT | 1 cut(s) | 10 |
| Hsp92II | CATG | 6 cut(s) | 80, 136, 153, 245, 357, 410 |
| Kzo9I | GATC | 3 cut(s) | 34, 238, 286 |
| LpnPI | CCDG | 3 cut(s) | 183, 225, 416 |
| Lsp1109I | GCAGC | 1 cut(s) | 265 |
| LweI | GCATC | 1 cut(s) | 254 |
| MaeI | CTAG | 1 cut(s) | 282 |
| MaeII | ACGT | 1 cut(s) | 10 |
| MaeIII | GTNAC | 1 cut(s) | 484 |
| MalI | GATC | 3 cut(s) | 36, 240, 288 |
| MboI | GATC | 3 cut(s) | 34, 238, 286 |
| MboII | GAAGA | 2 cut(s) | 67, 470 |
| MflI | RGATCY | 1 cut(s) | 286 |
| MluCI | AATT | 3 cut(s) | 45, 256, 315 |
| MnlI | CCTC | 2 cut(s) | 382, 484 |
| Mph1103I | ATGCAT | 1 cut(s) | 247 |
| MseI | TTAA | 1 cut(s) | 123 |
| MspI | CCGG | 1 cut(s) | 212 |
| MspR9I | CCNGG | 2 cut(s) | 212, 213 |
| Mva1269I | GAATGC | 1 cut(s) | 235 |
| NciI | CCSGG | 2 cut(s) | 212, 213 |
| NdeII | GATC | 3 cut(s) | 34, 238, 286 |
| NlaIII | CATG | 6 cut(s) | 80, 136, 153, 245, 357, 410 |
| NlaIV | GGNNCC | 1 cut(s) | 441 |
| NmuCI | GTSAC | 1 cut(s) | 484 |
| NsiI | ATGCAT | 1 cut(s) | 247 |
| PctI | GAATGC | 1 cut(s) | 235 |
| PfeI | GAWTC | 2 cut(s) | 350, 358 |
| PkrI | GCNGC | 1 cut(s) | 280 |
| PsiI | TTATAA | 1 cut(s) | 195 |
| PspN4I | GGNNCC | 1 cut(s) | 441 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| PsuI | RGATCY | 1 cut(s) | 286 |
| SaqAI | TTAA | 1 cut(s) | 123 |
| SatI | GCNGC | 1 cut(s) | 279 |
| Sau3AI | GATC | 3 cut(s) | 34, 238, 286 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| ScrFI | CCNGG | 2 cut(s) | 212, 213 |
| SetI | ASST | 6 cut(s) | 13, 445, 468, 476, 495, 502 |
| SfaNI | GCATC | 1 cut(s) | 254 |
| SfcI | CTRYAG | 1 cut(s) | 339 |
| SmaI | CCCGGG | 1 cut(s) | 213 |
| SmlI | CTYRAG | 1 cut(s) | 517 |
| SmoI | CTYRAG | 1 cut(s) | 517 |
| Sse9I | AATT | 3 cut(s) | 45, 256, 315 |
| SspMI | CTAG | 1 cut(s) | 282 |
| StyD4I | CCNGG | 2 cut(s) | 210, 211 |
| TaiI | ACGT | 1 cut(s) | 13 |
| TasI | AATT | 3 cut(s) | 45, 256, 315 |
| TfiI | GAWTC | 2 cut(s) | 350, 358 |
| Tru1I | TTAA | 1 cut(s) | 123 |
| Tru9I | TTAA | 1 cut(s) | 123 |
| TscAI | CASTG | 1 cut(s) | 493 |
| TseFI | GTSAC | 1 cut(s) | 484 |
| TseI | GCWGC | 1 cut(s) | 278 |
| Tsp45I | GTSAC | 1 cut(s) | 484 |
| TspDTI | ATGAA | 3 cut(s) | 38, 342, 471 |
| TspGWI | ACGGA | 1 cut(s) | 251 |
| TspMI | CCCGGG | 1 cut(s) | 211 |
| TspRI | CASTG | 1 cut(s) | 493 |
| XapI | RAATTY | 2 cut(s) | 45, 256 |
| XmaI | CCCGGG | 1 cut(s) | 211 |
| XspI | CTAG | 1 cut(s) | 282 |
| Zsp2I | ATGCAT | 1 cut(s) | 247 |