Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 432 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 379 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 209, 289, 379 |
| AflIII | ACRYGT | 1 cut(s) | 130 |
| AluBI | AGCT | 3 cut(s) | 176, 443, 476 |
| AluI | AGCT | 3 cut(s) | 176, 443, 476 |
| Ama87I | CYCGRG | 1 cut(s) | 177 |
| ApeKI | GCWGC | 5 cut(s) | 160, 173, 255, 305, 428 |
| AspLEI | GCGC | 1 cut(s) | 433 |
| AsuHPI | GGTGA | 2 cut(s) | 189, 229 |
| AsuII | TTCGAA | 1 cut(s) | 360 |
| AvaI | CYCGRG | 1 cut(s) | 177 |
| BbvI | GCAGC | 5 cut(s) | 172, 185, 242, 292, 415 |
| BfaI | CTAG | 5 cut(s) | 9, 309, 462, 467, 498 |
| BisI | GCNGC | 5 cut(s) | 161, 174, 256, 306, 429 |
| BlpI | GCTNAGC | 1 cut(s) | 186 |
| BlsI | GCNGC | 5 cut(s) | 162, 175, 257, 307, 430 |
| BmeT110I | CYCGRG | 1 cut(s) | 177 |
| BmiI | GGNNCC | 1 cut(s) | 348 |
| BmsI | GCATC | 3 cut(s) | 242, 400, 510 |
| BoxI | GACNNNNGTC | 1 cut(s) | 43 |
| BpmI | CTGGAG | 1 cut(s) | 438 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 186 |
| Bpu14I | TTCGAA | 1 cut(s) | 360 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 209, 289, 379 |
| BseGI | GGATG | 2 cut(s) | 257, 415 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 209, 289, 379 |
| BseMII | CTCAG | 1 cut(s) | 390 |
| BseRI | GAGGAG | 3 cut(s) | 192, 416, 419 |
| BseXI | GCAGC | 5 cut(s) | 172, 185, 242, 292, 415 |
| BsiHKCI | CYCGRG | 1 cut(s) | 177 |
| BslFI | GGGAC | 1 cut(s) | 51 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 209, 289, 379 |
| BsmFI | GGGAC | 1 cut(s) | 51 |
| BsoBI | CYCGRG | 1 cut(s) | 177 |
| Bsp119I | TTCGAA | 1 cut(s) | 360 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 186 |
| BspCNI | CTCAG | 1 cut(s) | 391 |
| BspLI | GGNNCC | 1 cut(s) | 348 |
| BspT104I | TTCGAA | 1 cut(s) | 360 |
| Bst4CI | ACNGT | 2 cut(s) | 116, 167 |
| BstBI | TTCGAA | 1 cut(s) | 360 |
| BstDEI | CTNAG | 3 cut(s) | 186, 399, 444 |
| BstEII | GGTNACC | 1 cut(s) | 195 |
| BstF5I | GGATG | 2 cut(s) | 257, 415 |
| BstHHI | GCGC | 1 cut(s) | 433 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 182, 305, 314, 449 |
| BstNSI | RCATGY | 1 cut(s) | 134 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 43 |
| BstPI | GGTNACC | 1 cut(s) | 195 |
| BstV1I | GCAGC | 5 cut(s) | 172, 185, 242, 292, 415 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 213 |
| BtsCI | GGATG | 2 cut(s) | 257, 415 |
| BtsI | GCAGTG | 1 cut(s) | 197 |
| BtsIMutI | CAGTG | 1 cut(s) | 197 |
| CfoI | GCGC | 1 cut(s) | 433 |
| CviAII | CATG | 2 cut(s) | 131, 394 |
| CviJI | RGCY | 9 cut(s) | 176, 185, 224, 317, 347, 428, 443, 452, 476 |
| CviKI_1 | RGCY | 9 cut(s) | 176, 185, 224, 317, 347, 428, 443, 452, 476 |
| DdeI | CTNAG | 3 cut(s) | 186, 399, 444 |
| Eco32I | GATATC | 2 cut(s) | 90, 391 |
| Eco88I | CYCGRG | 1 cut(s) | 177 |
| Eco91I | GGTNACC | 1 cut(s) | 195 |
| EcoO65I | GGTNACC | 1 cut(s) | 195 |
| EcoRV | GATATC | 2 cut(s) | 90, 391 |
| FaeI | CATG | 2 cut(s) | 134, 397 |
| FaiI | YATR | 9 cut(s) | 34, 52, 132, 230, 290, 395, 435, 437, 513 |
| FaqI | GGGAC | 1 cut(s) | 51 |
| FatI | CATG | 2 cut(s) | 130, 393 |
| FauNDI | CATATG | 1 cut(s) | 435 |
| Fnu4HI | GCNGC | 5 cut(s) | 161, 174, 256, 306, 429 |
| FokI | GGATG | 2 cut(s) | 264, 422 |
| Fsp4HI | GCNGC | 5 cut(s) | 161, 174, 256, 306, 429 |
| FspBI | CTAG | 5 cut(s) | 9, 309, 462, 467, 498 |
| FspI | TGCGCA | 1 cut(s) | 432 |
| GlaI | GCGC | 1 cut(s) | 432 |
| GluI | GCNGC | 5 cut(s) | 161, 174, 256, 306, 429 |
| GsuI | CTGGAG | 1 cut(s) | 438 |
| HhaI | GCGC | 1 cut(s) | 433 |
| Hin1II | CATG | 2 cut(s) | 134, 397 |
| Hin6I | GCGC | 1 cut(s) | 431 |
| HinP1I | GCGC | 1 cut(s) | 431 |
| HinfI | GANTC | 2 cut(s) | 39, 490 |
| HphI | GGTGA | 2 cut(s) | 189, 229 |
| Hpy188I | TCNGA | 2 cut(s) | 400, 489 |
| Hpy188III | TCNNGA | 3 cut(s) | 179, 417, 467 |
| HpyAV | CCTTC | 1 cut(s) | 214 |
| HpyCH4III | ACNGT | 2 cut(s) | 116, 167 |
| HpyCH4V | TGCA | 1 cut(s) | 258 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 182, 305, 314, 449 |
| HpyF3I | CTNAG | 3 cut(s) | 186, 399, 444 |
| Hsp92II | CATG | 2 cut(s) | 134, 397 |
| HspAI | GCGC | 1 cut(s) | 431 |
| LmnI | GCTCC | 2 cut(s) | 128, 352 |
| LpnPI | CCDG | 3 cut(s) | 28, 402, 410 |
| Lsp1109I | GCAGC | 5 cut(s) | 172, 185, 242, 292, 415 |
| LweI | GCATC | 3 cut(s) | 242, 400, 510 |
| MaeI | CTAG | 5 cut(s) | 9, 309, 462, 467, 498 |
| MaeIII | GTNAC | 1 cut(s) | 195 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MfeI | CAATTG | 1 cut(s) | 207 |
| MluCI | AATT | 6 cut(s) | 142, 207, 240, 351, 377, 457 |
| MlyI | GAGTC | 1 cut(s) | 33 |
| MseI | TTAA | 4 cut(s) | 141, 239, 384, 456 |
| MunI | CAATTG | 1 cut(s) | 207 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 182, 305, 314, 449 |
| NdeI | CATATG | 1 cut(s) | 435 |
| NlaIII | CATG | 2 cut(s) | 134, 397 |
| NlaIV | GGNNCC | 1 cut(s) | 348 |
| NmuCI | GTSAC | 1 cut(s) | 195 |
| NsbI | TGCGCA | 1 cut(s) | 432 |
| NspI | RCATGY | 1 cut(s) | 134 |
| NspV | TTCGAA | 1 cut(s) | 360 |
| PaeR7I | CTCGAG | 1 cut(s) | 177 |
| PciI | ACATGT | 1 cut(s) | 130 |
| PfeI | GAWTC | 1 cut(s) | 490 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 379 |
| PkrI | GCNGC | 5 cut(s) | 162, 175, 257, 307, 430 |
| PleI | GAGTC | 1 cut(s) | 33 |
| PpsI | GAGTC | 1 cut(s) | 33 |
| PscI | ACATGT | 1 cut(s) | 130 |
| PshAI | GACNNNNGTC | 1 cut(s) | 43 |
| PspEI | GGTNACC | 1 cut(s) | 195 |
| PspN4I | GGNNCC | 1 cut(s) | 348 |
| SaqAI | TTAA | 4 cut(s) | 141, 239, 384, 456 |
| SatI | GCNGC | 5 cut(s) | 161, 174, 256, 306, 429 |
| SchI | GAGTC | 1 cut(s) | 33 |
| SetI | ASST | 4 cut(s) | 178, 202, 445, 478 |
| SfaNI | GCATC | 3 cut(s) | 242, 400, 510 |
| Sfr274I | CTCGAG | 1 cut(s) | 177 |
| SfuI | TTCGAA | 1 cut(s) | 360 |
| SlaI | CTCGAG | 1 cut(s) | 177 |
| SmlI | CTYRAG | 1 cut(s) | 177 |
| SmoI | CTYRAG | 1 cut(s) | 177 |
| Sse9I | AATT | 6 cut(s) | 142, 207, 240, 351, 377, 457 |
| SspMI | CTAG | 5 cut(s) | 9, 309, 462, 467, 498 |
| TaaI | ACNGT | 2 cut(s) | 116, 167 |
| TaqI | TCGA | 3 cut(s) | 47, 178, 360 |
| TasI | AATT | 6 cut(s) | 142, 207, 240, 351, 377, 457 |
| TfiI | GAWTC | 1 cut(s) | 490 |
| Tru1I | TTAA | 4 cut(s) | 141, 239, 384, 456 |
| Tru9I | TTAA | 4 cut(s) | 141, 239, 384, 456 |
| TscAI | CASTG | 1 cut(s) | 197 |
| TseFI | GTSAC | 1 cut(s) | 195 |
| TseI | GCWGC | 5 cut(s) | 160, 173, 255, 305, 428 |
| Tsp45I | GTSAC | 1 cut(s) | 195 |
| TspRI | CASTG | 1 cut(s) | 197 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 379 |
| XbaI | TCTAGA | 1 cut(s) | 466 |
| XceI | RCATGY | 1 cut(s) | 134 |
| XhoI | CTCGAG | 1 cut(s) | 177 |
| XspI | CTAG | 5 cut(s) | 9, 309, 462, 467, 498 |