Ribonuclease H protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 42 - 97 | 6.9e-06 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 196 |
| AfaI | GTAC | 1 cut(s) | 15 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 238 |
| AgsI | TTSAA | 1 cut(s) | 26 |
| AluBI | AGCT | 2 cut(s) | 137, 237 |
| AluI | AGCT | 2 cut(s) | 137, 237 |
| Alw21I | GWGCWC | 1 cut(s) | 49 |
| AoxI | GGCC | 1 cut(s) | 270 |
| ApoI | RAATTY | 1 cut(s) | 196 |
| AseI | ATTAAT | 1 cut(s) | 123 |
| AspS9I | GGNCC | 1 cut(s) | 289 |
| AsuII | TTCGAA | 1 cut(s) | 218 |
| AvaII | GGWCC | 1 cut(s) | 289 |
| BaeGI | GKGCMC | 1 cut(s) | 70 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 38 |
| Bbv12I | GWGCWC | 1 cut(s) | 49 |
| BfaI | CTAG | 1 cut(s) | 234 |
| BfmI | CTRYAG | 1 cut(s) | 187 |
| Bme18I | GGWCC | 1 cut(s) | 289 |
| BmgT120I | GGNCC | 1 cut(s) | 289 |
| BmiI | GGNNCC | 1 cut(s) | 290 |
| Bpu14I | TTCGAA | 1 cut(s) | 218 |
| BsaJI | CCNNGG | 2 cut(s) | 59, 249 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 238 |
| BseDI | CCNNGG | 2 cut(s) | 59, 249 |
| BseGI | GGATG | 1 cut(s) | 228 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BseRI | GAGGAG | 1 cut(s) | 90 |
| BseSI | GKGCMC | 1 cut(s) | 70 |
| BshFI | GGCC | 1 cut(s) | 272 |
| BsiHKAI | GWGCWC | 1 cut(s) | 49 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 238 |
| BsnI | GGCC | 1 cut(s) | 272 |
| Bsp119I | TTCGAA | 1 cut(s) | 218 |
| Bsp1286I | GDGCHC | 2 cut(s) | 49, 70 |
| Bsp1407I | TGTACA | 1 cut(s) | 13 |
| Bsp19I | CCATGG | 1 cut(s) | 59 |
| BspANI | GGCC | 1 cut(s) | 272 |
| BspLI | GGNNCC | 1 cut(s) | 290 |
| BspT104I | TTCGAA | 1 cut(s) | 218 |
| BsrGI | TGTACA | 1 cut(s) | 13 |
| BssECI | CCNNGG | 2 cut(s) | 59, 249 |
| BssT1I | CCWWGG | 1 cut(s) | 59 |
| BstAUI | TGTACA | 1 cut(s) | 13 |
| BstBI | TTCGAA | 1 cut(s) | 218 |
| BstC8I | GCNNGC | 1 cut(s) | 66 |
| BstDSI | CCRYGG | 1 cut(s) | 59 |
| BstF5I | GGATG | 1 cut(s) | 228 |
| BstSFI | CTRYAG | 1 cut(s) | 187 |
| BstSLI | GKGCMC | 1 cut(s) | 70 |
| BsuRI | GGCC | 1 cut(s) | 272 |
| BtgI | CCRYGG | 1 cut(s) | 59 |
| BtsCI | GGATG | 1 cut(s) | 228 |
| Cac8I | GCNNGC | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 1 cut(s) | 289 |
| Csp6I | GTAC | 1 cut(s) | 14 |
| CviAII | CATG | 4 cut(s) | 60, 161, 256, 285 |
| CviJI | RGCY | 6 cut(s) | 137, 148, 173, 237, 248, 272 |
| CviKI_1 | RGCY | 6 cut(s) | 137, 148, 173, 237, 248, 272 |
| CviQI | GTAC | 1 cut(s) | 14 |
| Eco130I | CCWWGG | 1 cut(s) | 59 |
| Eco47I | GGWCC | 1 cut(s) | 289 |
| EcoT14I | CCWWGG | 1 cut(s) | 59 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| ErhI | CCWWGG | 1 cut(s) | 59 |
| FaeI | CATG | 4 cut(s) | 63, 164, 259, 288 |
| FaiI | YATR | 8 cut(s) | 6, 61, 96, 162, 168, 189, 257, 286 |
| FatI | CATG | 4 cut(s) | 59, 160, 255, 284 |
| FokI | GGATG | 1 cut(s) | 215 |
| FspBI | CTAG | 1 cut(s) | 234 |
| HaeIII | GGCC | 1 cut(s) | 272 |
| Hin1II | CATG | 4 cut(s) | 63, 164, 259, 288 |
| HinfI | GANTC | 1 cut(s) | 220 |
| Hpy188I | TCNGA | 1 cut(s) | 130 |
| Hpy188III | TCNNGA | 1 cut(s) | 224 |
| HpyAV | CCTTC | 2 cut(s) | 32, 167 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 284 |
| Hsp92II | CATG | 4 cut(s) | 63, 164, 259, 288 |
| MaeI | CTAG | 1 cut(s) | 234 |
| MaeIII | GTNAC | 1 cut(s) | 182 |
| MboII | GAAGA | 1 cut(s) | 207 |
| MhlI | GDGCHC | 2 cut(s) | 49, 70 |
| MluCI | AATT | 4 cut(s) | 78, 88, 124, 196 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| MnlI | CCTC | 5 cut(s) | 76, 111, 160, 185, 244 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 2 cut(s) | 117, 123 |
| MslI | CAYNNNNRTG | 1 cut(s) | 165 |
| NcoI | CCATGG | 1 cut(s) | 59 |
| NlaIII | CATG | 4 cut(s) | 63, 164, 259, 288 |
| NlaIV | GGNNCC | 1 cut(s) | 290 |
| NmeAIII | GCCGAG | 1 cut(s) | 274 |
| NmuCI | GTSAC | 1 cut(s) | 182 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| NspV | TTCGAA | 1 cut(s) | 218 |
| PfeI | GAWTC | 1 cut(s) | 220 |
| PshBI | ATTAAT | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 1 cut(s) | 290 |
| PspPI | GGNCC | 1 cut(s) | 289 |
| RsaI | GTAC | 1 cut(s) | 15 |
| RsaNI | GTAC | 1 cut(s) | 14 |
| RseI | CAYNNNNRTG | 1 cut(s) | 165 |
| SaqAI | TTAA | 2 cut(s) | 117, 123 |
| Sau96I | GGNCC | 1 cut(s) | 289 |
| SduI | GDGCHC | 2 cut(s) | 49, 70 |
| SetI | ASST | 6 cut(s) | 24, 87, 139, 159, 239, 255 |
| SfcI | CTRYAG | 1 cut(s) | 187 |
| SfuI | TTCGAA | 1 cut(s) | 218 |
| SinI | GGWCC | 1 cut(s) | 289 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 165 |
| Sse9I | AATT | 4 cut(s) | 78, 88, 124, 196 |
| SspMI | CTAG | 1 cut(s) | 234 |
| StyI | CCWWGG | 1 cut(s) | 59 |
| TaqI | TCGA | 1 cut(s) | 218 |
| TasI | AATT | 4 cut(s) | 78, 88, 124, 196 |
| TatI | WGTACW | 1 cut(s) | 13 |
| TfiI | GAWTC | 1 cut(s) | 220 |
| Tru1I | TTAA | 2 cut(s) | 117, 123 |
| Tru9I | TTAA | 2 cut(s) | 117, 123 |
| TseFI | GTSAC | 1 cut(s) | 182 |
| Tsp45I | GTSAC | 1 cut(s) | 182 |
| TspDTI | ATGAA | 1 cut(s) | 149 |
| VpaK11BI | GGWCC | 1 cut(s) | 289 |
| VspI | ATTAAT | 1 cut(s) | 123 |
| XapI | RAATTY | 1 cut(s) | 196 |
| XspI | CTAG | 1 cut(s) | 234 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |