Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 543 |
| AccI | GTMKAC | 1 cut(s) | 23 |
| AciI | CCGC | 1 cut(s) | 710 |
| AcsI | RAATTY | 2 cut(s) | 66, 872 |
| AfaI | GTAC | 1 cut(s) | 457 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 382, 545 |
| AflIII | ACRYGT | 1 cut(s) | 336 |
| AgsI | TTSAA | 4 cut(s) | 280, 310, 862, 871 |
| AjiI | CACGTC | 1 cut(s) | 337 |
| AjnI | CCWGG | 1 cut(s) | 137 |
| AluBI | AGCT | 3 cut(s) | 216, 575, 932 |
| AluI | AGCT | 3 cut(s) | 216, 575, 932 |
| Alw26I | GTCTC | 1 cut(s) | 203 |
| Ama87I | CYCGRG | 1 cut(s) | 543 |
| AoxI | GGCC | 3 cut(s) | 265, 372, 656 |
| ApaI | GGGCCC | 1 cut(s) | 269 |
| ApeKI | GCWGC | 1 cut(s) | 904 |
| ApoI | RAATTY | 2 cut(s) | 66, 872 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 84, 116 |
| AseI | ATTAAT | 2 cut(s) | 561, 684 |
| AspS9I | GGNCC | 4 cut(s) | 41, 265, 266, 373 |
| AsuHPI | GGTGA | 1 cut(s) | 314 |
| AsuNHI | GCTAGC | 1 cut(s) | 928 |
| AvaI | CYCGRG | 1 cut(s) | 543 |
| AvaII | GGWCC | 1 cut(s) | 41 |
| BaeGI | GKGCMC | 1 cut(s) | 269 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 437, 470 |
| BanII | GRGCYC | 1 cut(s) | 269 |
| BbsI | GAAGAC | 2 cut(s) | 317, 707 |
| BbvI | GCAGC | 1 cut(s) | 891 |
| BccI | CCATC | 2 cut(s) | 413, 563 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 37 |
| BciT130I | CCWGG | 1 cut(s) | 139 |
| BciVI | GTATCC | 1 cut(s) | 685 |
| BcoDI | GTCTC | 1 cut(s) | 203 |
| BfaI | CTAG | 4 cut(s) | 213, 459, 654, 929 |
| BfuI | GTATCC | 1 cut(s) | 685 |
| BisI | GCNGC | 1 cut(s) | 905 |
| BlsI | GCNGC | 1 cut(s) | 906 |
| Bme1390I | CCNGG | 1 cut(s) | 139 |
| Bme18I | GGWCC | 1 cut(s) | 41 |
| BmeT110I | CYCGRG | 1 cut(s) | 543 |
| BmgBI | CACGTC | 1 cut(s) | 337 |
| BmgT120I | GGNCC | 4 cut(s) | 41, 265, 266, 373 |
| BmiI | GGNNCC | 2 cut(s) | 43, 267 |
| BmrFI | CCNGG | 1 cut(s) | 139 |
| BmsI | GCATC | 3 cut(s) | 23, 121, 229 |
| BmtI | GCTAGC | 1 cut(s) | 932 |
| BpiI | GAAGAC | 2 cut(s) | 317, 707 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 537, 569, 749, 781 |
| BpuEI | CTTGAG | 3 cut(s) | 67, 139, 773 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 382, 545 |
| Bse3DI | GCAATG | 2 cut(s) | 177, 539 |
| BseBI | CCWGG | 1 cut(s) | 139 |
| BseGI | GGATG | 2 cut(s) | 14, 751 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 382, 545 |
| BseMI | GCAATG | 2 cut(s) | 177, 539 |
| BseMII | CTCAG | 2 cut(s) | 263, 687 |
| BseRI | GAGGAG | 2 cut(s) | 140, 713 |
| BseSI | GKGCMC | 1 cut(s) | 269 |
| BseXI | GCAGC | 1 cut(s) | 891 |
| BsgI | GTGCAG | 2 cut(s) | 724, 890 |
| BshFI | GGCC | 3 cut(s) | 267, 374, 658 |
| BsiHKCI | CYCGRG | 1 cut(s) | 543 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 382, 545 |
| BsmAI | GTCTC | 1 cut(s) | 203 |
| BsnI | GGCC | 3 cut(s) | 267, 374, 658 |
| BsoBI | CYCGRG | 1 cut(s) | 543 |
| Bsp120I | GGGCCC | 1 cut(s) | 265 |
| Bsp1286I | GDGCHC | 1 cut(s) | 269 |
| BspACI | CCGC | 1 cut(s) | 710 |
| BspANI | GGCC | 3 cut(s) | 267, 374, 658 |
| BspCNI | CTCAG | 2 cut(s) | 264, 688 |
| BspLI | GGNNCC | 2 cut(s) | 43, 267 |
| BspOI | GCTAGC | 1 cut(s) | 932 |
| BsrDI | GCAATG | 2 cut(s) | 177, 539 |
| Bst2UI | CCWGG | 1 cut(s) | 139 |
| Bst4CI | ACNGT | 1 cut(s) | 590 |
| Bst6I | CTCTTC | 2 cut(s) | 465, 506 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 118, 901, 925 |
| BstC8I | GCNNGC | 5 cut(s) | 75, 218, 669, 917, 930 |
| BstDEI | CTNAG | 3 cut(s) | 272, 696, 811 |
| BstF5I | GGATG | 2 cut(s) | 14, 751 |
| BstMAI | GTCTC | 1 cut(s) | 203 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 118, 664, 901, 925 |
| BstNI | CCWGG | 1 cut(s) | 139 |
| BstNSI | RCATGY | 5 cut(s) | 77, 186, 224, 504, 671 |
| BstSCI | CCNGG | 1 cut(s) | 137 |
| BstSLI | GKGCMC | 1 cut(s) | 269 |
| BstV1I | GCAGC | 1 cut(s) | 891 |
| BstV2I | GAAGAC | 2 cut(s) | 317, 707 |
| BsuI | GTATCC | 1 cut(s) | 685 |
| BsuRI | GGCC | 3 cut(s) | 267, 374, 658 |
| BtrI | CACGTC | 1 cut(s) | 337 |
| BtsCI | GGATG | 2 cut(s) | 14, 751 |
| BtsIMutI | CAGTG | 2 cut(s) | 269, 595 |
| Cac8I | GCNNGC | 5 cut(s) | 75, 218, 669, 917, 930 |
| Cfr13I | GGNCC | 4 cut(s) | 41, 265, 266, 373 |
| CseI | GACGC | 1 cut(s) | 653 |
| CsiI | ACCWGGT | 1 cut(s) | 137 |
| Csp6I | GTAC | 1 cut(s) | 456 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 258, 293 |
| CviAII | CATG | 8 cut(s) | 74, 122, 183, 221, 370, 501, 668, 889 |
| CviJI | RGCY | 8 cut(s) | 216, 267, 319, 374, 575, 658, 915, 932 |
| CviKI_1 | RGCY | 8 cut(s) | 216, 267, 319, 374, 575, 658, 915, 932 |
| CviQI | GTAC | 1 cut(s) | 456 |
| DdeI | CTNAG | 3 cut(s) | 272, 696, 811 |
| DraI | TTTAAA | 1 cut(s) | 229 |
| Eam1104I | CTCTTC | 2 cut(s) | 465, 506 |
| EarI | CTCTTC | 2 cut(s) | 465, 506 |
| Eco147I | AGGCCT | 1 cut(s) | 658 |
| Eco24I | GRGCYC | 1 cut(s) | 269 |
| Eco47I | GGWCC | 1 cut(s) | 41 |
| Eco88I | CYCGRG | 1 cut(s) | 543 |
| EcoO109I | RGGNCCY | 1 cut(s) | 41 |
| EcoRII | CCWGG | 1 cut(s) | 137 |
| EcoT22I | ATGCAT | 1 cut(s) | 441 |
| EcoT38I | GRGCYC | 1 cut(s) | 269 |
| FaeI | CATG | 8 cut(s) | 77, 125, 186, 224, 373, 504, 671, 892 |
| FatI | CATG | 8 cut(s) | 73, 121, 182, 220, 369, 500, 667, 888 |
| FauI | CCCGC | 1 cut(s) | 703 |
| FauNDI | CATATG | 1 cut(s) | 441 |
| FblI | GTMKAC | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 1 cut(s) | 905 |
| FokI | GGATG | 1 cut(s) | 758 |
| FriOI | GRGCYC | 1 cut(s) | 269 |
| Fsp4HI | GCNGC | 1 cut(s) | 905 |
| FspBI | CTAG | 4 cut(s) | 213, 459, 654, 929 |
| GluI | GCNGC | 1 cut(s) | 905 |
| HaeIII | GGCC | 3 cut(s) | 267, 374, 658 |
| HgaI | GACGC | 1 cut(s) | 653 |
| Hin1II | CATG | 8 cut(s) | 77, 125, 186, 224, 373, 504, 671, 892 |
| HincII | GTYRAC | 1 cut(s) | 24 |
| HindII | GTYRAC | 1 cut(s) | 24 |
| HinfI | GANTC | 2 cut(s) | 552, 764 |
| HphI | GGTGA | 1 cut(s) | 314 |
| Hpy166II | GTNNAC | 4 cut(s) | 24, 390, 456, 586 |
| Hpy188I | TCNGA | 5 cut(s) | 492, 620, 679, 745, 777 |
| Hpy188III | TCNNGA | 5 cut(s) | 156, 173, 467, 478, 790 |
| Hpy8I | GTNNAC | 4 cut(s) | 24, 390, 456, 586 |
| Hpy99I | CGWCG | 2 cut(s) | 25, 28 |
| HpyAV | CCTTC | 1 cut(s) | 782 |
| HpyCH4III | ACNGT | 1 cut(s) | 590 |
| HpyCH4IV | ACGT | 2 cut(s) | 26, 336 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 118, 664, 901, 925 |
| HpyF3I | CTNAG | 3 cut(s) | 272, 696, 811 |
| HpySE526I | ACGT | 2 cut(s) | 26, 336 |
| Hsp92II | CATG | 8 cut(s) | 77, 125, 186, 224, 373, 504, 671, 892 |
| LmnI | GCTCC | 3 cut(s) | 4, 31, 572 |
| LpnPI | CCDG | 8 cut(s) | 20, 124, 151, 158, 452, 491, 566, 691 |
| Lsp1109I | GCAGC | 1 cut(s) | 891 |
| LweI | GCATC | 3 cut(s) | 23, 121, 229 |
| MabI | ACCWGGT | 1 cut(s) | 137 |
| MaeI | CTAG | 4 cut(s) | 213, 459, 654, 929 |
| MaeII | ACGT | 2 cut(s) | 26, 336 |
| MaeIII | GTNAC | 2 cut(s) | 302, 347 |
| MboII | GAAGA | 5 cut(s) | 322, 358, 482, 523, 707 |
| MhlI | GDGCHC | 1 cut(s) | 269 |
| MluCI | AATT | 7 cut(s) | 66, 93, 354, 405, 558, 805, 872 |
| MlyI | GAGTC | 2 cut(s) | 546, 758 |
| MmeI | TCCRAC | 5 cut(s) | 9, 312, 454, 577, 723 |
| Mph1103I | ATGCAT | 1 cut(s) | 441 |
| MseI | TTAA | 6 cut(s) | 96, 228, 357, 561, 684, 729 |
| MspR9I | CCNGG | 1 cut(s) | 139 |
| MvaI | CCWGG | 1 cut(s) | 139 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 118, 664, 901, 925 |
| NdeI | CATATG | 1 cut(s) | 441 |
| NheI | GCTAGC | 1 cut(s) | 928 |
| NlaIII | CATG | 8 cut(s) | 77, 125, 186, 224, 373, 504, 671, 892 |
| NlaIV | GGNNCC | 2 cut(s) | 43, 267 |
| NmuCI | GTSAC | 2 cut(s) | 302, 347 |
| NsiI | ATGCAT | 1 cut(s) | 441 |
| NspI | RCATGY | 5 cut(s) | 77, 186, 224, 504, 671 |
| PaeI | GCATGC | 2 cut(s) | 77, 671 |
| PaeR7I | CTCGAG | 1 cut(s) | 543 |
| PceI | AGGCCT | 1 cut(s) | 658 |
| PkrI | GCNGC | 1 cut(s) | 906 |
| PleI | GAGTC | 2 cut(s) | 546, 758 |
| PpsI | GAGTC | 2 cut(s) | 546, 758 |
| PpuMI | RGGWCCY | 1 cut(s) | 41 |
| PshBI | ATTAAT | 2 cut(s) | 561, 684 |
| Psp5II | RGGWCCY | 1 cut(s) | 41 |
| Psp6I | CCWGG | 1 cut(s) | 137 |
| PspGI | CCWGG | 1 cut(s) | 137 |
| PspN4I | GGNNCC | 2 cut(s) | 43, 267 |
| PspOMI | GGGCCC | 1 cut(s) | 265 |
| PspPI | GGNCC | 4 cut(s) | 41, 265, 266, 373 |
| PspPPI | RGGWCCY | 1 cut(s) | 41 |
| PspXI | VCTCGAGB | 1 cut(s) | 543 |
| RsaI | GTAC | 1 cut(s) | 457 |
| RsaNI | GTAC | 1 cut(s) | 456 |
| SalI | GTCGAC | 1 cut(s) | 22 |
| SaqAI | TTAA | 6 cut(s) | 96, 228, 357, 561, 684, 729 |
| SatI | GCNGC | 1 cut(s) | 905 |
| Sau96I | GGNCC | 4 cut(s) | 41, 265, 266, 373 |
| SchI | GAGTC | 2 cut(s) | 546, 758 |
| ScrFI | CCNGG | 1 cut(s) | 139 |
| SduI | GDGCHC | 1 cut(s) | 269 |
| SexAI | ACCWGGT | 1 cut(s) | 137 |
| SfaNI | GCATC | 3 cut(s) | 23, 121, 229 |
| Sfr274I | CTCGAG | 1 cut(s) | 543 |
| SgrDI | CGTCGACG | 1 cut(s) | 22 |
| SinI | GGWCC | 1 cut(s) | 41 |
| SlaI | CTCGAG | 1 cut(s) | 543 |
| SmlI | CTYRAG | 4 cut(s) | 46, 154, 543, 788 |
| SmoI | CTYRAG | 4 cut(s) | 46, 154, 543, 788 |
| SphI | GCATGC | 2 cut(s) | 77, 671 |
| Sse9I | AATT | 7 cut(s) | 66, 93, 354, 405, 558, 805, 872 |
| SseBI | AGGCCT | 1 cut(s) | 658 |
| SsiI | CCGC | 1 cut(s) | 710 |
| SspI | AATATT | 2 cut(s) | 56, 565 |
| SspMI | CTAG | 4 cut(s) | 213, 459, 654, 929 |
| StuI | AGGCCT | 1 cut(s) | 658 |
| StyD4I | CCNGG | 1 cut(s) | 137 |
| TaaI | ACNGT | 1 cut(s) | 590 |
| TaiI | ACGT | 2 cut(s) | 29, 339 |
| TaqI | TCGA | 3 cut(s) | 23, 544, 876 |
| TasI | AATT | 7 cut(s) | 66, 93, 354, 405, 558, 805, 872 |
| TatI | WGTACW | 1 cut(s) | 455 |
| Tru1I | TTAA | 6 cut(s) | 96, 228, 357, 561, 684, 729 |
| Tru9I | TTAA | 6 cut(s) | 96, 228, 357, 561, 684, 729 |
| TscAI | CASTG | 2 cut(s) | 276, 595 |
| TseFI | GTSAC | 2 cut(s) | 302, 347 |
| TseI | GCWGC | 1 cut(s) | 904 |
| Tsp45I | GTSAC | 2 cut(s) | 302, 347 |
| TspDTI | ATGAA | 2 cut(s) | 358, 905 |
| TspRI | CASTG | 2 cut(s) | 276, 595 |
| VpaK11BI | GGWCC | 1 cut(s) | 41 |
| VspI | ATTAAT | 2 cut(s) | 561, 684 |
| XapI | RAATTY | 2 cut(s) | 66, 872 |
| XceI | RCATGY | 5 cut(s) | 77, 186, 224, 504, 671 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 895 |
| XhoI | CTCGAG | 1 cut(s) | 543 |
| XmiI | GTMKAC | 1 cut(s) | 23 |
| XspI | CTAG | 4 cut(s) | 213, 459, 654, 929 |
| Zsp2I | ATGCAT | 1 cut(s) | 441 |