Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0016608

Physical Location & Seq

Genomic Coordinates Forward (+)

52306501 .. 52310187

Gene Structure 3687 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G026100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1215 bp

ATGTTCGGAGCTCAATCGTCGTCTCCCTTCGGAGCTCAGACGTCCTCTTCTCCCTTCGGAGCCTTCGGCACTCCGTCTTCAACCTTCGGCACTCCGGCTTCGACCTCCGCCTTCGGGACTCCATCCTCGAATCCAGCCTTCGGCACTCCCTCGACGACCCCGTCCTTCTTCACTCCTAGTTCCACCCCCGCCTTCGGAACTCCCACCACGTCGTCGTTTTCCACCGGCGGCTTCGGGGCCTCCTTGTTCTCCAGCGCCTTCTCTACTCAGACTCAGCAGCAACAGCAAACGCCGTCGTTTCAGCAACAAGCTCCCTCCACCGGTGGATTTGGGACTCAGAATCCGTTCGGTACGCCGCCGCCGCAGCAGCAGACGCCGTCGTTTCAGAGTCCCTTTCCTACTCAATTGACCACTCAGATGGCTCCCGTGGCTCCTCTCCCTTACTCTCTCGCCGATCGTGACATTCAGGCAATTGTTGACGCTTATAAGGATGAGCCTGGTAACCCTAAATATGCTTTTAAGCATCTGTTGTTTAGTGTAACTGATCCGCAGTTTAGGGTGAAGCCTGCTGGTGTATCGGATATAATGTGGGCAGAGGCTATGGGGAAGCTTGAAGGTCTATCAAGTACTGACAGAGAACGGCTGTGGCCTGAGCTTGTTCAGGGTTTTAAGGATCTTTCACAACGCCTGAAGCTCCAAGATGAAGTCATACTTTCAGATGCTGAGAGACTGCAAATGACCCAAAGCAACGTGAAGATGCTTCAAAGACATTTTCAAGCTGACACTATTCCTCGGATTGAAAGAATGAGACAGAAAGAGCAAGGTCTTGAAAGGCGCCTGTTGAGGGTAATGAGAATACTGGAGGCGCTAGAGGGCAAAGGTTTCCGATTGCCTTTAATGAAAGGGGAAGCTGAGTTGGCTGAGAAGTTAGCTTCAATAACTAGACAGTTGAAAGGACCTGGAGCTGAGCTTTCTAGCAGGGTACAAAACCTGCGAACTATATCCCGAGTCCAGGCAAATTCTTTTGGTGCTGGTGGTTTTGTTTCTCTTCCAGGATCAACCAAAATACATGAACAGAGTCTTGCTGATATGCAAGAGGTCTTACAACAACAGACTGAGGCTATTGCAAGACTTGGCAATGTTTTGAAGCGTGATATTAGGGATATGGAGATTATAATGGCTGAGGAGCCAGACACTACAGATAATATGAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0006606 GO:0006607 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0017056 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036228 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044613 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072657 GO:0090435

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup54

Protein Analysis

404

Amino Acids

43.99

Weight (kDa)

6.38

Isoelectric Point (pI)

49.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nup54	PF13874	188 - 332	2.8e-32	Nucleoporin complex subunit 54

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0016608)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24310
fragaria_vesca	FvH4_4g23970
malus_domestica	MD13G1116800.v1.1 MD16G1117500.v1.1
prunus_persica	Prupe.1G228700_v2.0.a1
pyrus_communis	pycom13g10140 pycom16g10070
rosa_chinensis	RchiOBHm_Chr4g0430621
rosa_laevigata	RLG00000006962
rosa_multiflora	Rmu_sc0000131.1_g000016
rosa_roxburghii	Rroxscaffold_5G00372370
rosa_rugosa	Rorug04G0244800
rosa_samantha	Rh4DG305500
rosa_wichuraiana	Rw4G026100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	486, 1175
AasI	GACNNNNNNGTC	1 cut(s)	160
AatII	GACGTC	1 cut(s)	44
Acc36I	ACCTGC	1 cut(s)	999
AccB1I	GGYRCC	1 cut(s)	834
AciI	CCGC	7 cut(s)	108, 189, 228, 356, 359, 362, 548
AclWI	GGATC	3 cut(s)	539, 681, 1063
AcsI	RAATTY	1 cut(s)	1018
AcuI	CTGAAG	1 cut(s)	710
AcyI	GRCGYC	3 cut(s)	41, 374, 835
AfaI	GTAC	3 cut(s)	352, 628, 984
AfiI	CCNNNNNNNGG	6 cut(s)	114, 140, 194, 320, 844, 1012
AgeI	ACCGGT	1 cut(s)	320
AgsI	TTSAA	9 cut(s)	81, 614, 764, 776, 800, 830, 936, 952, 1147
AjiI	CACGTC	1 cut(s)	210
AjnI	CCWGG	4 cut(s)	496, 958, 1011, 1051
Alw21I	GWGCWC	2 cut(s)	13, 37
Alw26I	GTCTC	3 cut(s)	27, 721, 802
AlwI	GGATC	3 cut(s)	539, 681, 1063
AlwNI	CAGNNNCTG	1 cut(s)	722
Ama87I	CYCGRG	1 cut(s)	1005
AoxI	GGCC	2 cut(s)	237, 647
ApeKI	GCWGC	3 cut(s)	277, 364, 367
ApoI	RAATTY	1 cut(s)	1018
AsiGI	ACCGGT	1 cut(s)	320
Asp700I	GAANNNNTTC	1 cut(s)	344
AspLEI	GCGC	3 cut(s)	257, 837, 868
AspS9I	GGNCC	2 cut(s)	237, 956
AsuHPI	GGTGA	1 cut(s)	571
AvaI	CYCGRG	1 cut(s)	1005
AvaII	GGWCC	1 cut(s)	956
BanI	GGYRCC	1 cut(s)	834
BanII	GRGCYC	2 cut(s)	13, 37
BbsI	GAAGAC	1 cut(s)	69
Bbv12I	GWGCWC	2 cut(s)	13, 37
BbvCI	CCTCAGC	1 cut(s)	1182
BbvI	GCAGC	3 cut(s)	289, 376, 379
BccI	CCATC	2 cut(s)	130, 412
BceAI	ACGGC	3 cut(s)	277, 361, 656
BciT130I	CCWGG	4 cut(s)	498, 960, 1013, 1053
BcoDI	GTCTC	3 cut(s)	27, 721, 802
BfaI	CTAG	4 cut(s)	177, 869, 942, 975
BfmI	CTRYAG	1 cut(s)	1197
BfoI	RGCGCY	3 cut(s)	258, 838, 869
BfuAI	ACCTGC	1 cut(s)	999
BisI	GCNGC	7 cut(s)	229, 278, 356, 359, 362, 365, 368
BlpI	GCTNAGC	1 cut(s)	966
BlsI	GCNGC	7 cut(s)	230, 279, 357, 360, 363, 366, 369
BmcAI	AGTACT	1 cut(s)	628
Bme1390I	CCNGG	4 cut(s)	498, 960, 1013, 1053
Bme18I	GGWCC	1 cut(s)	956
BmeT110I	CYCGRG	1 cut(s)	1005
BmgBI	CACGTC	1 cut(s)	210
BmgT120I	GGNCC	2 cut(s)	237, 956
BmiI	GGNNCC	6 cut(s)	61, 238, 423, 432, 836, 1188
BmrFI	CCNGG	4 cut(s)	498, 960, 1013, 1053
BmsI	GCATC	3 cut(s)	532, 709, 747
BpiI	GAAGAC	1 cut(s)	69
BpmI	CTGGAG	3 cut(s)	235, 881, 981
Bpu10I	CCTNAGC	2 cut(s)	651, 1182
Bpu1102I	GCTNAGC	1 cut(s)	966
BsaHI	GRCGYC	3 cut(s)	41, 374, 835
BsaJI	CCNNGG	2 cut(s)	426, 791
BsaWI	WCCGGW	1 cut(s)	320
Bsc4I	CCNNNNNNNGG	6 cut(s)	114, 140, 194, 320, 844, 1012
Bse118I	RCCGGY	2 cut(s)	224, 320
Bse1I	ACTGG	1 cut(s)	864
Bse3DI	GCAATG	1 cut(s)	1144
BseBI	CCWGG	4 cut(s)	498, 960, 1013, 1053
BseDI	CCNNGG	2 cut(s)	426, 791
BseGI	GGATG	2 cut(s)	122, 496
BseLI	CCNNNNNNNGG	6 cut(s)	114, 140, 194, 320, 844, 1012
BseMI	GCAATG	1 cut(s)	1144
BseNI	ACTGG	1 cut(s)	864
BseRI	GAGGAG	2 cut(s)	423, 1199
BseXI	GCAGC	3 cut(s)	289, 376, 379
Bsh1285I	CGRYCG	1 cut(s)	457
BshFI	GGCC	2 cut(s)	239, 649
BshNI	GGYRCC	1 cut(s)	834
BshTI	ACCGGT	1 cut(s)	320
BsiEI	CGRYCG	1 cut(s)	457
BsiHKAI	GWGCWC	2 cut(s)	13, 37
BsiHKCI	CYCGRG	1 cut(s)	1005
BsiSI	CCGG	3 cut(s)	95, 225, 321
BslFI	GGGAC	3 cut(s)	130, 346, 375
BslI	CCNNNNNNNGG	6 cut(s)	114, 140, 194, 320, 844, 1012
BsmAI	GTCTC	3 cut(s)	27, 721, 802
BsmBI	CGTCTC	1 cut(s)	27
BsmFI	GGGAC	3 cut(s)	130, 346, 375
BsnI	GGCC	2 cut(s)	239, 649
BsoBI	CYCGRG	1 cut(s)	1005
Bsp1286I	GDGCHC	2 cut(s)	13, 37
Bsp143I	GATC	4 cut(s)	454, 544, 673, 1055
Bsp1720I	GCTNAGC	1 cut(s)	966
BspACI	CCGC	7 cut(s)	108, 189, 228, 356, 359, 362, 548
BspANI	GGCC	2 cut(s)	239, 649
BspLI	GGNNCC	6 cut(s)	61, 238, 423, 432, 836, 1188
BspMI	ACCTGC	1 cut(s)	999
BspPI	GGATC	3 cut(s)	539, 681, 1063
BspT107I	GGYRCC	1 cut(s)	834
BsrDI	GCAATG	1 cut(s)	1144
BsrFI	RCCGGY	2 cut(s)	224, 320
BsrI	ACTGG	1 cut(s)	864
BssAI	RCCGGY	2 cut(s)	224, 320
BssECI	CCNNGG	2 cut(s)	426, 791
BssMI	GATC	4 cut(s)	454, 544, 673, 1055
BssNI	GRCGYC	3 cut(s)	41, 374, 835
Bst2UI	CCWGG	4 cut(s)	498, 960, 1013, 1053
Bst4CI	ACNGT	1 cut(s)	948
Bst6I	CTCTTC	2 cut(s)	52, 1053
BstACI	GRCGYC	3 cut(s)	41, 374, 835
BstC8I	GCNNGC	1 cut(s)	567
BstDSI	CCRYGG	1 cut(s)	426
BstEII	GGTNACC	1 cut(s)	500
BstF5I	GGATG	2 cut(s)	122, 496
BstH2I	RGCGCY	3 cut(s)	258, 838, 869
BstHHI	GCGC	3 cut(s)	257, 837, 868
BstKTI	GATC	4 cut(s)	457, 547, 676, 1058
BstMAI	GTCTC	3 cut(s)	27, 721, 802
BstMBI	GATC	4 cut(s)	454, 544, 673, 1055
BstMCI	CGRYCG	1 cut(s)	457
BstMWI	GCNNNNNNNGC	7 cut(s)	283, 361, 364, 367, 373, 428, 917
BstNI	CCWGG	4 cut(s)	498, 960, 1013, 1053
BstPI	GGTNACC	1 cut(s)	500
BstSCI	CCNGG	4 cut(s)	496, 958, 1011, 1051
BstSFI	CTRYAG	1 cut(s)	1197
BstV1I	GCAGC	3 cut(s)	289, 376, 379
BstV2I	GAAGAC	1 cut(s)	69
BstX2I	RGATCY	1 cut(s)	673
BstXI	CCANNNNNNTGG	1 cut(s)	418
BstYI	RGATCY	1 cut(s)	673
BsuRI	GGCC	2 cut(s)	239, 649
BtgI	CCRYGG	1 cut(s)	426
BtrI	CACGTC	1 cut(s)	210
BtsCI	GGATG	2 cut(s)	122, 496
BveI	ACCTGC	1 cut(s)	999
Cac8I	GCNNGC	1 cut(s)	567
CaiI	CAGNNNCTG	1 cut(s)	722
CfoI	GCGC	3 cut(s)	257, 837, 868
Cfr10I	RCCGGY	2 cut(s)	224, 320
Cfr13I	GGNCC	2 cut(s)	237, 956
CseI	GACGC	2 cut(s)	382, 488
Csp6I	GTAC	3 cut(s)	351, 627, 983
CspAI	ACCGGT	1 cut(s)	320
CviAII	CATG	1 cut(s)	1070
CviQI	GTAC	3 cut(s)	351, 627, 983
DinI	GGCGCC	1 cut(s)	836
DpnI	GATC	4 cut(s)	456, 546, 675, 1057
DpnII	GATC	4 cut(s)	454, 544, 673, 1055
DrdI	GACNNNNNNGTC	1 cut(s)	160
DseDI	GACNNNNNNGTC	1 cut(s)	160
Eam1104I	CTCTTC	2 cut(s)	52, 1053
EarI	CTCTTC	2 cut(s)	52, 1053
EciI	GGCGGA	1 cut(s)	97
Ecl136II	GAGCTC	2 cut(s)	11, 35
Eco24I	GRGCYC	2 cut(s)	13, 37
Eco47I	GGWCC	1 cut(s)	956
Eco53kI	GAGCTC	2 cut(s)	11, 35
Eco57I	CTGAAG	1 cut(s)	710
Eco88I	CYCGRG	1 cut(s)	1005
Eco91I	GGTNACC	1 cut(s)	500
EcoICRI	GAGCTC	2 cut(s)	11, 35
EcoO109I	RGGNCCY	2 cut(s)	237, 956
EcoO65I	GGTNACC	1 cut(s)	500
EcoRII	CCWGG	4 cut(s)	496, 958, 1011, 1051
EcoT38I	GRGCYC	2 cut(s)	13, 37
EgeI	GGCGCC	1 cut(s)	836
EheI	GGCGCC	1 cut(s)	836
Esp3I	CGTCTC	1 cut(s)	27
FaeI	CATG	1 cut(s)	1073
FalI	AAGNNNNNCTT	2 cut(s)	696, 728
FaqI	GGGAC	3 cut(s)	130, 346, 375
FatI	CATG	1 cut(s)	1069
FauI	CCCGC	1 cut(s)	196
Fnu4HI	GCNGC	7 cut(s)	229, 278, 356, 359, 362, 365, 368
FokI	GGATG	2 cut(s)	109, 503
FriOI	GRGCYC	2 cut(s)	13, 37
Fsp4HI	GCNGC	7 cut(s)	229, 278, 356, 359, 362, 365, 368
FspBI	CTAG	4 cut(s)	177, 869, 942, 975
GlaI	GCGC	3 cut(s)	256, 836, 867
GluI	GCNGC	7 cut(s)	229, 278, 356, 359, 362, 365, 368
GsuI	CTGGAG	3 cut(s)	235, 881, 981
HaeII	RGCGCY	3 cut(s)	258, 838, 869
HaeIII	GGCC	2 cut(s)	239, 649
HapII	CCGG	3 cut(s)	95, 225, 321
HgaI	GACGC	2 cut(s)	382, 488
HhaI	GCGC	3 cut(s)	257, 837, 868
Hin1I	GRCGYC	3 cut(s)	41, 374, 835
Hin1II	CATG	1 cut(s)	1073
Hin6I	GCGC	3 cut(s)	255, 835, 866
HinP1I	GCGC	3 cut(s)	255, 835, 866
HincII	GTYRAC	1 cut(s)	478
HindII	GTYRAC	1 cut(s)	478
HindIII	AAGCTT	1 cut(s)	608
HinfI	GANTC	8 cut(s)	118, 130, 271, 334, 340, 388, 1008, 1078
HpaII	CCGG	3 cut(s)	95, 225, 321
HphI	GGTGA	1 cut(s)	571
Hpy166II	GTNNAC	1 cut(s)	478
Hpy188III	TCNNGA	4 cut(s)	115, 458, 827, 1005
Hpy8I	GTNNAC	1 cut(s)	478
Hpy99I	CGWCG	6 cut(s)	22, 157, 214, 217, 298, 382
HpyCH4III	ACNGT	1 cut(s)	948
HpyCH4IV	ACGT	3 cut(s)	41, 209, 750
HpyCH4V	TGCA	3 cut(s)	733, 1093, 1127
HpyF10VI	GCNNNNNNNGC	7 cut(s)	283, 361, 364, 367, 373, 428, 917
HpySE526I	ACGT	3 cut(s)	41, 209, 750
Hsp92I	GRCGYC	3 cut(s)	41, 374, 835
Hsp92II	CATG	1 cut(s)	1073
HspAI	GCGC	3 cut(s)	255, 835, 866
KasI	GGCGCC	1 cut(s)	834
Kzo9I	GATC	4 cut(s)	454, 544, 673, 1055
LmnI	GCTCC	9 cut(s)	8, 32, 59, 316, 427, 436, 699, 962, 1186
Lsp1109I	GCAGC	3 cut(s)	289, 376, 379
LweI	GCATC	3 cut(s)	532, 709, 747
MaeI	CTAG	4 cut(s)	177, 869, 942, 975
MaeII	ACGT	3 cut(s)	41, 209, 750
MaeIII	GTNAC	3 cut(s)	458, 500, 538
MalI	GATC	4 cut(s)	456, 546, 675, 1057
MboI	GATC	4 cut(s)	454, 544, 673, 1055
MboII	GAAGA	5 cut(s)	39, 69, 160, 766, 1040
MfeI	CAATTG	2 cut(s)	404, 471
MflI	RGATCY	1 cut(s)	673
MhlI	GDGCHC	2 cut(s)	13, 37
MluCI	AATT	3 cut(s)	404, 471, 1018
Mly113I	GGCGCC	1 cut(s)	835
MlyI	GAGTC	6 cut(s)	112, 265, 328, 397, 1017, 1087
MroXI	GAANNNNTTC	1 cut(s)	344
MseI	TTAA	3 cut(s)	519, 669, 896
MslI	CAYNNNNRTG	1 cut(s)	416
MspI	CCGG	3 cut(s)	95, 225, 321
MspR9I	CCNGG	4 cut(s)	498, 960, 1013, 1053
MunI	CAATTG	2 cut(s)	404, 471
MvaI	CCWGG	4 cut(s)	498, 960, 1013, 1053
MwoI	GCNNNNNNNGC	7 cut(s)	283, 361, 364, 367, 373, 428, 917
NarI	GGCGCC	1 cut(s)	835
NdeII	GATC	4 cut(s)	454, 544, 673, 1055
NlaIII	CATG	1 cut(s)	1073
NlaIV	GGNNCC	6 cut(s)	61, 238, 423, 432, 836, 1188
NmuCI	GTSAC	1 cut(s)	458
PcsI	WCGNNNNNNNCGW	1 cut(s)	158
PdmI	GAANNNNTTC	1 cut(s)	344
PfeI	GAWTC	2 cut(s)	130, 340
PflFI	GACNNNGTC	2 cut(s)	160, 376
PfoI	TCCNGGA	1 cut(s)	1051
PinAI	ACCGGT	1 cut(s)	320
PkrI	GCNGC	7 cut(s)	230, 279, 357, 360, 363, 366, 369
Ple19I	CGATCG	1 cut(s)	457
PleI	GAGTC	6 cut(s)	112, 265, 328, 396, 1016, 1086
PluTI	GGCGCC	1 cut(s)	838
PpsI	GAGTC	6 cut(s)	112, 265, 328, 396, 1016, 1086
PpuMI	RGGWCCY	1 cut(s)	956
PsiI	TTATAA	2 cut(s)	486, 1175
Psp124BI	GAGCTC	2 cut(s)	13, 37
Psp5II	RGGWCCY	1 cut(s)	956
Psp6I	CCWGG	4 cut(s)	496, 958, 1011, 1051
PspEI	GGTNACC	1 cut(s)	500
PspGI	CCWGG	4 cut(s)	496, 958, 1011, 1051
PspN4I	GGNNCC	6 cut(s)	61, 238, 423, 432, 836, 1188
PspPI	GGNCC	2 cut(s)	237, 956
PspPPI	RGGWCCY	1 cut(s)	956
PstNI	CAGNNNCTG	1 cut(s)	722
PsuI	RGATCY	1 cut(s)	673
PsyI	GACNNNGTC	2 cut(s)	160, 376
PvuI	CGATCG	1 cut(s)	457
RsaI	GTAC	3 cut(s)	352, 628, 984
RsaNI	GTAC	3 cut(s)	351, 627, 983
RseI	CAYNNNNRTG	1 cut(s)	416
SacI	GAGCTC	2 cut(s)	13, 37
SaqAI	TTAA	3 cut(s)	519, 669, 896
SatI	GCNGC	7 cut(s)	229, 278, 356, 359, 362, 365, 368
Sau3AI	GATC	4 cut(s)	454, 544, 673, 1055
Sau96I	GGNCC	2 cut(s)	237, 956
ScaI	AGTACT	1 cut(s)	628
SchI	GAGTC	6 cut(s)	112, 265, 328, 397, 1017, 1087
ScrFI	CCNGG	4 cut(s)	498, 960, 1013, 1053
SduI	GDGCHC	2 cut(s)	13, 37
SfaNI	GCATC	3 cut(s)	532, 709, 747
SfcI	CTRYAG	1 cut(s)	1197
SfoI	GGCGCC	1 cut(s)	836
SgrAI	CRCCGGYG	2 cut(s)	224, 320
SinI	GGWCC	1 cut(s)	956
SmiMI	CAYNNNNRTG	1 cut(s)	416
Sse9I	AATT	3 cut(s)	404, 471, 1018
SsiI	CCGC	7 cut(s)	108, 189, 228, 356, 359, 362, 548
SspDI	GGCGCC	1 cut(s)	834
SspMI	CTAG	4 cut(s)	177, 869, 942, 975
SstI	GAGCTC	2 cut(s)	13, 37
StyD4I	CCNGG	4 cut(s)	496, 958, 1011, 1051
TaaI	ACNGT	1 cut(s)	948
TaiI	ACGT	3 cut(s)	44, 212, 753
TaqI	TCGA	3 cut(s)	101, 128, 152
TasI	AATT	3 cut(s)	404, 471, 1018
TatI	WGTACW	1 cut(s)	626
TauI	GCSGC	4 cut(s)	231, 358, 361, 364
TfiI	GAWTC	2 cut(s)	130, 340
Tru1I	TTAA	3 cut(s)	519, 669, 896
Tru9I	TTAA	3 cut(s)	519, 669, 896
TseFI	GTSAC	1 cut(s)	458
TseI	GCWGC	3 cut(s)	277, 364, 367
Tsp45I	GTSAC	1 cut(s)	458
TspDTI	ATGAA	3 cut(s)	717, 914, 1086
TspGWI	ACGGA	2 cut(s)	63, 333
Tth111I	GACNNNGTC	2 cut(s)	160, 376
VpaK11BI	GGWCC	1 cut(s)	956
XapI	RAATTY	1 cut(s)	1018
XmnI	GAANNNNTTC	1 cut(s)	344
XspI	CTAG	4 cut(s)	177, 869, 942, 975
ZraI	GACGTC	1 cut(s)	42
ZrmI	AGTACT	1 cut(s)	628

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.