Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0016608

Physical Location & Seq

Genomic Coordinates Forward (+)

53817740 .. 53821102

Gene Structure 3363 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00372370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGTTCGGAGCTCAATCGTCGTCTTCTCCCTTCGGAGCCCAGGCGTCCTCTTCTCCCTTCGGAGCCTTCGGCACTCCGTCTTCAACCTTCGGCACTCCGGCATCGACCTCCGCCTTCGGGACTCCATCCTCGACTCCAGCCTTCGGCACTCCCTCGACGACCCCGTCCTTCTTCACTCCTAGTTCCACCCCCGCCTTCGGAACTCCCACCACGTCGTCGTTTTCCACCGGCGGCTTCGGGACCTCCTTGTTTTCCAGCGCCTTCTCTACTCAGACTCAGCAGCAACAGCAAGCGCCGTCGTTTCAGCAACAAGCTCCCTCCACCGGTGGATTTGGGACTCAGAATCCGTTCGGTACGCCACAGCTGCAGACTCCGTCGTTTCAGAGTCCCTTTCCTACTCAATTGACCACTCAGATGGCTCCCGTGGCTCCTCTCCCTTACTCTCTCGCCGATCGTGACATTCAGGCAATTGTTGACGCTTATAAGGACGAGCCTGGTAACCCTAAATATGCTTTTAAGCATTTGCTGTTTAGTGTGACCGATCCTCAGTTTAGGGTGAAGCCTGCTGGTGTATCGGATATAATGTGGGCAGAGGCTATGGGGAAGCTTGAAGGTCTATCAAGTACTGACAGAGAACGGCTGTGGCCTGAGCTTGTTCAGGGTTTTAAGGATCTTTCACAACGCCTGAAGCTCCAAGATGAAGTCATACTTTCAGATGCTGAGAGACTGCAAATGACCCAAAGCAACGTGAAGATGCTTCAAAGACATTTTCAGGCTGACACTATTCCTCGGATTGAAAGAATGAGACAGAAAGAGCAAGGTCTTGAAAGGCGCCTGTTGAGGGTAATGAGAATACTGGAGGCACTAGAGGGCAAAGGTTTCCGATTGCCTTTAATGAAAGGGGAAGCTGAGTTGGCTGAGAAGTTAGCTTCAATAACTAGACAGTTGAAAGGACCTGGAGCTGAGCTTTCTAGCAGGGTACAAAACCTGCGAACTATATCCCGAGTCCAGGCAAATTCTATTGGTGCTGGTGGTTTTGTTTCTCTTCCAGGATCAACGAAAATACATGAACAGAGTCTTGCTGATATGCAAGAGGTCTTACAACAACAGACTGAGGCTATTGCAAGACTTGGCAATGTTTTGAAGCGTGATATTAGGGATATGGAGATTATAATGGCTGAGGAGCCAGACACTACAGATAATATGTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005643 GO:0005730 GO:0006606 GO:0006607 GO:0006810 GO:0006886 GO:0006913 GO:0006996 GO:0006997 GO:0006999 GO:0008104 GO:0008150 GO:0009987 GO:0012505 GO:0015031 GO:0015833 GO:0016043 GO:0017038 GO:0017056 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0033036 GO:0033365 GO:0034504 GO:0034613 GO:0036228 GO:0042886 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044613 GO:0045184 GO:0046907 GO:0051169 GO:0051170 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0070013 GO:0070727 GO:0071702 GO:0071705 GO:0071840 GO:0072594 GO:0072657 GO:0090435

KEGG Pathways

Metabolic & Signaling

ko03013 map03013

Pfam Domains

Protein Families

Nup54

Protein Analysis

403

Amino Acids

43.81

Weight (kDa)

6.37

Isoelectric Point (pI)

48.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Nup54	PF13874	187 - 331	2.7e-32	Nucleoporin complex subunit 54

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0016608)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G24310
fragaria_vesca	FvH4_4g23970
malus_domestica	MD13G1116800.v1.1 MD16G1117500.v1.1
prunus_persica	Prupe.1G228700_v2.0.a1
pyrus_communis	pycom13g10140 pycom16g10070
rosa_chinensis	RchiOBHm_Chr4g0430621
rosa_laevigata	RLG00000006962
rosa_multiflora	Rmu_sc0000131.1_g000016
rosa_roxburghii	Rroxscaffold_5G00372370
rosa_rugosa	Rorug04G0244800
rosa_samantha	Rh4DG305500
rosa_wichuraiana	Rw4G026100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	483, 1172
AasI	GACNNNNNNGTC	1 cut(s)	163
Acc36I	ACCTGC	1 cut(s)	996
AccB1I	GGYRCC	1 cut(s)	831
AciI	CCGC	3 cut(s)	111, 192, 231
AclWI	GGATC	3 cut(s)	536, 678, 1060
AcsI	RAATTY	1 cut(s)	1015
AcuI	CTGAAG	1 cut(s)	707
AcyI	GRCGYC	2 cut(s)	44, 832
AfaI	GTAC	3 cut(s)	355, 625, 981
AfiI	CCNNNNNNNGG	6 cut(s)	117, 143, 197, 323, 841, 1009
AgeI	ACCGGT	1 cut(s)	323
AgsI	TTSAA	8 cut(s)	84, 611, 761, 797, 827, 933, 949, 1144
AjiI	CACGTC	1 cut(s)	213
AjnI	CCWGG	5 cut(s)	39, 493, 955, 1008, 1048
Alw21I	GWGCWC	1 cut(s)	13
Alw26I	GTCTC	2 cut(s)	718, 799
AlwI	GGATC	3 cut(s)	536, 678, 1060
AlwNI	CAGNNNCTG	1 cut(s)	719
Ama87I	CYCGRG	1 cut(s)	1002
AoxI	GGCC	1 cut(s)	644
ApeKI	GCWGC	2 cut(s)	280, 364
ApoI	RAATTY	1 cut(s)	1015
AsiGI	ACCGGT	1 cut(s)	323
Asp700I	GAANNNNTTC	1 cut(s)	347
AspLEI	GCGC	3 cut(s)	260, 295, 834
AspS9I	GGNCC	2 cut(s)	240, 953
AsuHPI	GGTGA	1 cut(s)	568
AvaI	CYCGRG	1 cut(s)	1002
AvaII	GGWCC	2 cut(s)	240, 953
BanI	GGYRCC	1 cut(s)	831
BanII	GRGCYC	2 cut(s)	13, 40
BbsI	GAAGAC	2 cut(s)	15, 72
Bbv12I	GWGCWC	1 cut(s)	13
BbvCI	CCTCAGC	1 cut(s)	1179
BbvI	GCAGC	2 cut(s)	292, 351
BccI	CCATC	2 cut(s)	133, 409
BceAI	ACGGC	2 cut(s)	280, 653
BciT130I	CCWGG	5 cut(s)	41, 495, 957, 1010, 1050
BcoDI	GTCTC	2 cut(s)	718, 799
BfaI	CTAG	4 cut(s)	180, 866, 939, 972
BfmI	CTRYAG	2 cut(s)	365, 1194
BfoI	RGCGCY	3 cut(s)	261, 296, 835
BfuAI	ACCTGC	1 cut(s)	996
BisI	GCNGC	3 cut(s)	232, 281, 365
BlpI	GCTNAGC	1 cut(s)	963
BlsI	GCNGC	3 cut(s)	233, 282, 366
BmcAI	AGTACT	1 cut(s)	625
Bme1390I	CCNGG	5 cut(s)	41, 495, 957, 1010, 1050
Bme18I	GGWCC	2 cut(s)	240, 953
BmeT110I	CYCGRG	1 cut(s)	1002
BmgBI	CACGTC	1 cut(s)	213
BmgT120I	GGNCC	2 cut(s)	240, 953
BmiI	GGNNCC	7 cut(s)	37, 64, 241, 420, 429, 833, 1185
BmrFI	CCNGG	5 cut(s)	41, 495, 957, 1010, 1050
BmsI	GCATC	3 cut(s)	110, 706, 744
BpiI	GAAGAC	2 cut(s)	15, 72
BpmI	CTGGAG	3 cut(s)	120, 878, 978
Bpu10I	CCTNAGC	2 cut(s)	648, 1179
Bpu1102I	GCTNAGC	1 cut(s)	963
BsaHI	GRCGYC	2 cut(s)	44, 832
BsaJI	CCNNGG	3 cut(s)	39, 423, 788
BsaWI	WCCGGW	1 cut(s)	323
Bsc4I	CCNNNNNNNGG	6 cut(s)	117, 143, 197, 323, 841, 1009
Bse118I	RCCGGY	2 cut(s)	227, 323
Bse1I	ACTGG	1 cut(s)	861
Bse3DI	GCAATG	1 cut(s)	1141
BseBI	CCWGG	5 cut(s)	41, 495, 957, 1010, 1050
BseDI	CCNNGG	3 cut(s)	39, 423, 788
BseGI	GGATG	1 cut(s)	125
BseLI	CCNNNNNNNGG	6 cut(s)	117, 143, 197, 323, 841, 1009
BseMI	GCAATG	1 cut(s)	1141
BseNI	ACTGG	1 cut(s)	861
BseRI	GAGGAG	2 cut(s)	420, 1196
BseXI	GCAGC	2 cut(s)	292, 351
Bsh1285I	CGRYCG	1 cut(s)	454
BshFI	GGCC	1 cut(s)	646
BshNI	GGYRCC	1 cut(s)	831
BshTI	ACCGGT	1 cut(s)	323
BsiEI	CGRYCG	1 cut(s)	454
BsiHKAI	GWGCWC	1 cut(s)	13
BsiHKCI	CYCGRG	1 cut(s)	1002
BsiSI	CCGG	3 cut(s)	98, 228, 324
BslFI	GGGAC	4 cut(s)	133, 253, 349, 372
BslI	CCNNNNNNNGG	6 cut(s)	117, 143, 197, 323, 841, 1009
BsmAI	GTCTC	2 cut(s)	718, 799
BsmFI	GGGAC	4 cut(s)	133, 253, 349, 372
BsnI	GGCC	1 cut(s)	646
BsoBI	CYCGRG	1 cut(s)	1002
Bsp1286I	GDGCHC	2 cut(s)	13, 40
Bsp143I	GATC	4 cut(s)	451, 541, 670, 1052
Bsp1720I	GCTNAGC	1 cut(s)	963
BspACI	CCGC	3 cut(s)	111, 192, 231
BspANI	GGCC	1 cut(s)	646
BspLI	GGNNCC	7 cut(s)	37, 64, 241, 420, 429, 833, 1185
BspMAI	CTGCAG	1 cut(s)	369
BspMI	ACCTGC	1 cut(s)	996
BspPI	GGATC	3 cut(s)	536, 678, 1060
BspT107I	GGYRCC	1 cut(s)	831
BsrDI	GCAATG	1 cut(s)	1141
BsrFI	RCCGGY	2 cut(s)	227, 323
BsrI	ACTGG	1 cut(s)	861
BssAI	RCCGGY	2 cut(s)	227, 323
BssECI	CCNNGG	3 cut(s)	39, 423, 788
BssMI	GATC	4 cut(s)	451, 541, 670, 1052
BssNI	GRCGYC	2 cut(s)	44, 832
Bst2UI	CCWGG	5 cut(s)	41, 495, 957, 1010, 1050
Bst4CI	ACNGT	1 cut(s)	945
Bst6I	CTCTTC	2 cut(s)	55, 1050
BstACI	GRCGYC	2 cut(s)	44, 832
BstC8I	GCNNGC	2 cut(s)	291, 564
BstDSI	CCRYGG	1 cut(s)	423
BstEII	GGTNACC	1 cut(s)	497
BstF5I	GGATG	1 cut(s)	125
BstH2I	RGCGCY	3 cut(s)	261, 296, 835
BstHHI	GCGC	3 cut(s)	260, 295, 834
BstKTI	GATC	4 cut(s)	454, 544, 673, 1055
BstMAI	GTCTC	2 cut(s)	718, 799
BstMBI	GATC	4 cut(s)	451, 541, 670, 1052
BstMCI	CGRYCG	1 cut(s)	454
BstMWI	GCNNNNNNNGC	4 cut(s)	286, 364, 425, 914
BstNI	CCWGG	5 cut(s)	41, 495, 957, 1010, 1050
BstPI	GGTNACC	1 cut(s)	497
BstSCI	CCNGG	5 cut(s)	39, 493, 955, 1008, 1048
BstSFI	CTRYAG	2 cut(s)	365, 1194
BstV1I	GCAGC	2 cut(s)	292, 351
BstV2I	GAAGAC	2 cut(s)	15, 72
BstX2I	RGATCY	1 cut(s)	670
BstXI	CCANNNNNNTGG	1 cut(s)	415
BstYI	RGATCY	1 cut(s)	670
BsuRI	GGCC	1 cut(s)	646
BtgI	CCRYGG	1 cut(s)	423
BtrI	CACGTC	1 cut(s)	213
BtsCI	GGATG	1 cut(s)	125
BveI	ACCTGC	1 cut(s)	996
Cac8I	GCNNGC	2 cut(s)	291, 564
CaiI	CAGNNNCTG	1 cut(s)	719
CfoI	GCGC	3 cut(s)	260, 295, 834
Cfr10I	RCCGGY	2 cut(s)	227, 323
Cfr13I	GGNCC	2 cut(s)	240, 953
CseI	GACGC	2 cut(s)	33, 485
Csp6I	GTAC	3 cut(s)	354, 624, 980
CspAI	ACCGGT	1 cut(s)	323
CviAII	CATG	1 cut(s)	1067
CviQI	GTAC	3 cut(s)	354, 624, 980
DinI	GGCGCC	1 cut(s)	833
DpnI	GATC	4 cut(s)	453, 543, 672, 1054
DpnII	GATC	4 cut(s)	451, 541, 670, 1052
DrdI	GACNNNNNNGTC	1 cut(s)	163
DseDI	GACNNNNNNGTC	1 cut(s)	163
Eam1104I	CTCTTC	2 cut(s)	55, 1050
EarI	CTCTTC	2 cut(s)	55, 1050
EciI	GGCGGA	1 cut(s)	100
Ecl136II	GAGCTC	1 cut(s)	11
Eco24I	GRGCYC	2 cut(s)	13, 40
Eco47I	GGWCC	2 cut(s)	240, 953
Eco53kI	GAGCTC	1 cut(s)	11
Eco57I	CTGAAG	1 cut(s)	707
Eco88I	CYCGRG	1 cut(s)	1002
Eco91I	GGTNACC	1 cut(s)	497
EcoICRI	GAGCTC	1 cut(s)	11
EcoO109I	RGGNCCY	2 cut(s)	240, 953
EcoO65I	GGTNACC	1 cut(s)	497
EcoRII	CCWGG	5 cut(s)	39, 493, 955, 1008, 1048
EcoT38I	GRGCYC	2 cut(s)	13, 40
EgeI	GGCGCC	1 cut(s)	833
EheI	GGCGCC	1 cut(s)	833
FaeI	CATG	1 cut(s)	1070
FalI	AAGNNNNNCTT	2 cut(s)	693, 725
FaqI	GGGAC	4 cut(s)	133, 253, 349, 372
FatI	CATG	1 cut(s)	1066
FauI	CCCGC	1 cut(s)	199
Fnu4HI	GCNGC	3 cut(s)	232, 281, 365
FokI	GGATG	1 cut(s)	112
FriOI	GRGCYC	2 cut(s)	13, 40
Fsp4HI	GCNGC	3 cut(s)	232, 281, 365
FspBI	CTAG	4 cut(s)	180, 866, 939, 972
GlaI	GCGC	3 cut(s)	259, 294, 833
GluI	GCNGC	3 cut(s)	232, 281, 365
GsuI	CTGGAG	3 cut(s)	120, 878, 978
HaeII	RGCGCY	3 cut(s)	261, 296, 835
HaeIII	GGCC	1 cut(s)	646
HapII	CCGG	3 cut(s)	98, 228, 324
HgaI	GACGC	2 cut(s)	33, 485
HhaI	GCGC	3 cut(s)	260, 295, 834
Hin1I	GRCGYC	2 cut(s)	44, 832
Hin1II	CATG	1 cut(s)	1070
Hin6I	GCGC	3 cut(s)	258, 293, 832
HinP1I	GCGC	3 cut(s)	258, 293, 832
HincII	GTYRAC	1 cut(s)	475
HindII	GTYRAC	1 cut(s)	475
HindIII	AAGCTT	1 cut(s)	605
HinfI	GANTC	9 cut(s)	121, 133, 274, 337, 343, 370, 385, 1005, 1075
HpaII	CCGG	3 cut(s)	98, 228, 324
HphI	GGTGA	1 cut(s)	568
Hpy166II	GTNNAC	1 cut(s)	475
Hpy188III	TCNNGA	5 cut(s)	118, 238, 455, 824, 1002
Hpy8I	GTNNAC	1 cut(s)	475
Hpy99I	CGWCG	6 cut(s)	22, 160, 217, 220, 301, 379
HpyCH4III	ACNGT	1 cut(s)	945
HpyCH4IV	ACGT	2 cut(s)	212, 747
HpyCH4V	TGCA	4 cut(s)	367, 730, 1090, 1124
HpyF10VI	GCNNNNNNNGC	4 cut(s)	286, 364, 425, 914
HpySE526I	ACGT	2 cut(s)	212, 747
Hsp92I	GRCGYC	2 cut(s)	44, 832
Hsp92II	CATG	1 cut(s)	1070
HspAI	GCGC	3 cut(s)	258, 293, 832
KasI	GGCGCC	1 cut(s)	831
Kzo9I	GATC	4 cut(s)	451, 541, 670, 1052
LmnI	GCTCC	9 cut(s)	8, 35, 62, 319, 424, 433, 696, 959, 1183
Lsp1109I	GCAGC	2 cut(s)	292, 351
LweI	GCATC	3 cut(s)	110, 706, 744
MaeI	CTAG	4 cut(s)	180, 866, 939, 972
MaeII	ACGT	2 cut(s)	212, 747
MaeIII	GTNAC	3 cut(s)	455, 497, 535
MalI	GATC	4 cut(s)	453, 543, 672, 1054
MboI	GATC	4 cut(s)	451, 541, 670, 1052
MboII	GAAGA	6 cut(s)	15, 42, 72, 163, 763, 1037
MfeI	CAATTG	2 cut(s)	401, 468
MflI	RGATCY	1 cut(s)	670
MhlI	GDGCHC	2 cut(s)	13, 40
MluCI	AATT	3 cut(s)	401, 468, 1015
Mly113I	GGCGCC	1 cut(s)	832
MlyI	GAGTC	8 cut(s)	115, 127, 268, 331, 364, 394, 1014, 1084
MroXI	GAANNNNTTC	1 cut(s)	347
MseI	TTAA	3 cut(s)	516, 666, 893
MslI	CAYNNNNRTG	1 cut(s)	413
MspA1I	CMGCKG	1 cut(s)	364
MspI	CCGG	3 cut(s)	98, 228, 324
MspR9I	CCNGG	5 cut(s)	41, 495, 957, 1010, 1050
MunI	CAATTG	2 cut(s)	401, 468
MvaI	CCWGG	5 cut(s)	41, 495, 957, 1010, 1050
MwoI	GCNNNNNNNGC	4 cut(s)	286, 364, 425, 914
NarI	GGCGCC	1 cut(s)	832
NdeII	GATC	4 cut(s)	451, 541, 670, 1052
NlaIII	CATG	1 cut(s)	1070
NlaIV	GGNNCC	7 cut(s)	37, 64, 241, 420, 429, 833, 1185
NmuCI	GTSAC	2 cut(s)	455, 535
PcsI	WCGNNNNNNNCGW	1 cut(s)	161
PdmI	GAANNNNTTC	1 cut(s)	347
PfeI	GAWTC	1 cut(s)	343
PflFI	GACNNNGTC	2 cut(s)	163, 373
PfoI	TCCNGGA	1 cut(s)	1048
PinAI	ACCGGT	1 cut(s)	323
PkrI	GCNGC	3 cut(s)	233, 282, 366
Ple19I	CGATCG	1 cut(s)	454
PleI	GAGTC	8 cut(s)	115, 127, 268, 331, 364, 393, 1013, 1083
PluTI	GGCGCC	1 cut(s)	835
PpsI	GAGTC	8 cut(s)	115, 127, 268, 331, 364, 393, 1013, 1083
PpuMI	RGGWCCY	2 cut(s)	240, 953
PsiI	TTATAA	2 cut(s)	483, 1172
Psp124BI	GAGCTC	1 cut(s)	13
Psp5II	RGGWCCY	2 cut(s)	240, 953
Psp6I	CCWGG	5 cut(s)	39, 493, 955, 1008, 1048
PspEI	GGTNACC	1 cut(s)	497
PspGI	CCWGG	5 cut(s)	39, 493, 955, 1008, 1048
PspN4I	GGNNCC	7 cut(s)	37, 64, 241, 420, 429, 833, 1185
PspPI	GGNCC	2 cut(s)	240, 953
PspPPI	RGGWCCY	2 cut(s)	240, 953
PstI	CTGCAG	1 cut(s)	369
PstNI	CAGNNNCTG	1 cut(s)	719
PsuI	RGATCY	1 cut(s)	670
PsyI	GACNNNGTC	2 cut(s)	163, 373
PvuI	CGATCG	1 cut(s)	454
PvuII	CAGCTG	1 cut(s)	364
RsaI	GTAC	3 cut(s)	355, 625, 981
RsaNI	GTAC	3 cut(s)	354, 624, 980
RseI	CAYNNNNRTG	1 cut(s)	413
SacI	GAGCTC	1 cut(s)	13
SaqAI	TTAA	3 cut(s)	516, 666, 893
SatI	GCNGC	3 cut(s)	232, 281, 365
Sau3AI	GATC	4 cut(s)	451, 541, 670, 1052
Sau96I	GGNCC	2 cut(s)	240, 953
ScaI	AGTACT	1 cut(s)	625
SchI	GAGTC	8 cut(s)	115, 127, 268, 331, 364, 394, 1014, 1084
ScrFI	CCNGG	5 cut(s)	41, 495, 957, 1010, 1050
SduI	GDGCHC	2 cut(s)	13, 40
SfaNI	GCATC	3 cut(s)	110, 706, 744
SfcI	CTRYAG	2 cut(s)	365, 1194
SfoI	GGCGCC	1 cut(s)	833
SgrAI	CRCCGGYG	2 cut(s)	227, 323
SinI	GGWCC	2 cut(s)	240, 953
SmiMI	CAYNNNNRTG	1 cut(s)	413
Sse9I	AATT	3 cut(s)	401, 468, 1015
SsiI	CCGC	3 cut(s)	111, 192, 231
SspDI	GGCGCC	1 cut(s)	831
SspMI	CTAG	4 cut(s)	180, 866, 939, 972
SstI	GAGCTC	1 cut(s)	13
StyD4I	CCNGG	5 cut(s)	39, 493, 955, 1008, 1048
TaaI	ACNGT	1 cut(s)	945
TaiI	ACGT	2 cut(s)	215, 750
TaqI	TCGA	3 cut(s)	104, 131, 155
TaqII	GACCGA	1 cut(s)	554
TasI	AATT	3 cut(s)	401, 468, 1015
TatI	WGTACW	1 cut(s)	623
TauI	GCSGC	1 cut(s)	234
TfiI	GAWTC	1 cut(s)	343
Tru1I	TTAA	3 cut(s)	516, 666, 893
Tru9I	TTAA	3 cut(s)	516, 666, 893
TseFI	GTSAC	2 cut(s)	455, 535
TseI	GCWGC	2 cut(s)	280, 364
Tsp45I	GTSAC	2 cut(s)	455, 535
TspDTI	ATGAA	3 cut(s)	714, 911, 1083
TspGWI	ACGGA	3 cut(s)	66, 336, 363
Tth111I	GACNNNGTC	2 cut(s)	163, 373
VpaK11BI	GGWCC	2 cut(s)	240, 953
XapI	RAATTY	1 cut(s)	1015
XmnI	GAANNNNTTC	1 cut(s)	347
XspI	CTAG	4 cut(s)	180, 866, 939, 972
ZrmI	AGTACT	1 cut(s)	625

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.